prot_L-elsbetiae_contig12538.2054.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12538.2054.1
Unique Name	prot_L-elsbetiae_contig12538.2054.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	95

Homology

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BLAST of mRNA_L-elsbetiae_contig12538.2054.1 vs. uniprot
Match: A0A6H5JRD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD9_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 5.970e-47
Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 0

Query:    1 LSAVFWDGILITGGYFWVANNNNPSHDRWITLSFGATQTVAGMLMAVAVAFTMTGERFASLRVCLGTSQRVKFHFILTIFGTCVYLYNGVVLLFD 95
            LSAVFW+G+LITGGYFWV N +N SH RWI+LSFGATQTVAG+LMA+ V FTMTGERF+SLRVC  TSQRVKFHFILTIFGT VYLYNG+VL+FD
Sbjct:  125 LSAVFWNGVLITGGYFWVTNTSNESHGRWISLSFGATQTVAGILMALTVLFTMTGERFSSLRVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFD 219

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BLAST of mRNA_L-elsbetiae_contig12538.2054.1 vs. uniprot
Match: D7FUL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL6_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.460e-46
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0

Query:    1 LSAVFWDGILITGGYFWVANNNNPSHDRWITLSFGATQTVAGMLMAVAVAFTMTGERFASLRVCLGTSQRVKFHFILTIFGTCVYLYNGVVLLFD 95
            LSAVFW+G+LITGGYFWV N  N SH RWI+LSFGATQTVAGMLMA+AV FT++GERF+SL+VC  TSQRVKFHFILTIFGT VYLYNG+VL+FD
Sbjct:  125 LSAVFWNGVLITGGYFWVTNTGNESHGRWISLSFGATQTVAGMLMALAVLFTVSGERFSSLKVCCKTSQRVKFHFILTIFGTFVYLYNGIVLMFD 219

[Close]

BLAST of mRNA_L-elsbetiae_contig12538.2054.1 vs. uniprot
Match: A0A7S2US30_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US30_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.120e-11
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0

Query:    2 SAVFWDGILITGGYFWVANNNNPSHDRWITLSFGATQTVAGMLMAVAVAFTMTGERFASLRVCLGTSQRVKFHFILTIFGTCVYLYNGVVLLFD 95
            SA++WD ++IT GYFWV + N P H RWI LSF   Q++ GM+M V +   ++   + S   C   S RV+   +L+ F     +YNG+  + D
Sbjct:  162 SALYWDMLIITNGYFWVWSEN-PEHGRWINLSFTIVQSLVGMVMLVLLGVCISF--YKSAVKCFKNSSRVRIFTVLSTFAFLCNVYNGISSMLD 252

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12538.2054.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12538.2054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JRD9_9PHAE	5.970e-47	81.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUL6_ECTSI	1.460e-46	80.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2US30_9STRA	1.120e-11	38.30	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..94
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 53..72
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..52
None	No IPR available	TMHMM	TMhelix		coord: 2..19
None	No IPR available	TMHMM	TMhelix		coord: 29..51
None	No IPR available	TMHMM	TMhelix		coord: 72..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12538	contig	L-elsbetiae_contig12538:838..4913 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12538.2054.1	mRNA_L-elsbetiae_contig12538.2054.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12538 838..4913 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12538.2054.1 ID=prot_L-elsbetiae_contig12538.2054.1|Name=mRNA_L-elsbetiae_contig12538.2054.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
LSAVFWDGILITGGYFWVANNNNPSHDRWITLSFGATQTVAGMLMAVAVA
FTMTGERFASLRVCLGTSQRVKFHFILTIFGTCVYLYNGVVLLFD