prot_L-elsbetiae_contig11751.1520.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11751.1520.1
Unique Nameprot_L-elsbetiae_contig11751.1520.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length272
Homology
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BLAST of mRNA_L-elsbetiae_contig11751.1520.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 8.220e-29
Identity = 106/203 (52.22%), Postives = 116/203 (57.14%), Query Frame = 0 
Query:   89 MLSVGPLGDDSEALRLEAMAGRGSGGGGSS-------APSVHAIRCFNSQTELCALDLLRSGCIQDGDDEAAAAVAGSTQAGNGIILRGGAARRSTASRPLDLGSVPVLPFLFSGGLDLAHKTSDSNKGSSGXXXXXXXXXXXXX---------------RVFDLCLTRRERDAEVLRVVEAFGLNQDQARLLWRCARWFRPV 269
            MLSVGPLGDDSEALRLEA A  G+             + S+HAIRCFN+QT+L ALDLLR+G +  GDD                     A  R      LDL SVPVL FL SGGL      S  N     XXXXXXXXXXXXX               RVFDLCLTR ER+AEV + VEAF LN+DQARLLWRCA WFRP 
Sbjct:    1 MLSVGPLGDDSEALRLEATARGGAXXXXXXXXXXXXXSRSIHAIRCFNAQTDLSALDLLRNGRL--GDDXXXXXX---XXXXXXXXXXXNALGRGKGL--LDLDSVPVLRFLLSGGLAPDDCNSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPA 196
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BLAST of mRNA_L-elsbetiae_contig11751.1520.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 6.350e-10
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:   89 MLSVGPLGDDSEALRLEAMAG--------RGSGGGGSSAPSVHAIRCFNSQTELCALDLLRSGCIQDGD 149
            MLSVGPLGDDSEALRLEAMAG                +A S+HAIRCFN+QT L A+DLLR+G + D D
Sbjct:    1 MLSVGPLGDDSEALRLEAMAGGXXXXXXXXXXXXXXXNARSIHAIRCFNAQTHLSAVDLLRNGRLGDDD 69
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11751.1520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMF0_9PHAE8.220e-2952.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH01_ECTSI6.350e-1059.42Prematurely terminated mRNA decay factor-like n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11751contigL-elsbetiae_contig11751:998..5543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11751.1520.1mRNA_L-elsbetiae_contig11751.1520.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11751 998..5543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11751.1520.1 ID=prot_L-elsbetiae_contig11751.1520.1|Name=mRNA_L-elsbetiae_contig11751.1520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp
RGQGRGGDEEENDGEEEGDTTGKAKGGGGSGCGKLYLKILCLTESKEAAS
SYGKGDIWALSATGRFLDGSNDDVVFCRSLWHGVSSQGMLSVGPLGDDSE
ALRLEAMAGRGSGGGGSSAPSVHAIRCFNSQTELCALDLLRSGCIQDGDD
EAAAAVAGSTQAGNGIILRGGAARRSTASRPLDLGSVPVLPFLFSGGLDL
AHKTSDSNKGSSGGGGGGGDGDGEGERVFDLCLTRRERDAEVLRVVEAFG
LNQDQARLLWRCARWFRPVATG
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