prot_L-elsbetiae_contig1164.1424.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1164.1424.1
Unique Nameprot_L-elsbetiae_contig1164.1424.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length697
Homology
BLAST of mRNA_L-elsbetiae_contig1164.1424.1 vs. uniprot
Match: D7FU43_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU43_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 9.090e-209
Identity = 378/643 (58.79%), Postives = 449/643 (69.83%), Query Frame = 0
Query:   76 MGAACSKSKAASVANKENMAKVEDMLLVVPNG-------------GKNEGPDTAESTSLGEIPETLEALEEDPVREGAVLGVGALDSTAFLSPEPEQEEGVAAGDSALVAVENCV---AGLRRGGHAGDGS--DGMRCEDNKSAWIAQNLDVVPQGAA-VEVDQLKQLPGLEECLFELLQERARQLSAMEILIGELRRREAESTKASHDARALTARLECAEQDRSALERRAQAAGEEHRVDRARWFVHKQELETRCVQLESRDIQYRASIRKKEVEYGRLQDSLRRTVDKSTNFIARGTRGKDATK-GRGIETNLELSPGEATTEGGRNPLGGVLNEQAMCKVEELETENAGLRSMLVDLQGEVMDLKGYHDRHGDLVSAGRGRGSIEGG-IWSAGGVASPMEPFPEDVIEGMPGDWLERQVGEDTAQQIKGMRGALKRVLGDEDKEGGTGDDSMSQEDLVSLMSQLREARSLLREQDAIMFAAIFDRPGI--DGANRERCVCGADAGG-LGGSGVWDSLERLEQEREEXXXXXXXXXXXXXRFMEEAVRRDSKNFVYSYPPATPSPGPPAPRDTRYATPTHGSGQKQQQLGGGARLTVAXXXXXTPGRGARGAGDAAGLPLMTFTPPAASPDTTKLLGQLGI 694
            MGA CSKS   +VANKENM ++ D +++ PNG              ++   D     S G    +   +E+D     AVLG  ALDSTAFLSP P     VAA +    A  N V   A     G AG       M+ ED +SAW+A+NL ++P+G + +E ++LK+LPGLE+CL ELL ERAR LS ME L  +LRRREAE+TKA+HD +ALTARLEC+EQDRSALERR +A GEEHRV+RARWFVHKQELETRCVQLESRD QYRASIRKKEVEYGRLQDSLRR V+K +  ++RG  GK  +K  RGIE+NLELSPG ATTE G++PLG VLN QA  KV ELE EN  LR+ML DLQ EVM+LK Y DRHGDLVSA RG  SIEGG IW  GG  S ++P  E+VIEGMP DWLERQ GE+ A+Q+KGMR A+KRVLG+ ++EGG+ DDSMS ED+ SL+SQLREARSLLREQDAIMFAAIFD+PG     AN++RC+ G D G  LGGSG WDSLERLEQ+REE             +F+EEAV RDSK+FV++ PPATP+       D+RYATP H  G+    LG G +LTVA       GRG    G+A  L  M+FTPP ASPDTTKLLG LGI
Sbjct:    1 MGAMCSKS-GGNVANKENMGQLPDEMML-PNGVDSTMAGSGGSVDAQSNSRDRGLEASKGATASSNGQVEDDGA---AVLGA-ALDSTAFLSPAPAHGAQVAAAEGTSPAGSNDVEPGAAAVVNGIAGQDKVVSDMQLED-RSAWVARNLGMLPRGGSEIEAEKLKELPGLEDCLHELLSERARHLSTMETLSSQLRRREAEATKAAHDNKALTARLECSEQDRSALERRGRAEGEEHRVERARWFVHKQELETRCVQLESRDTQYRASIRKKEVEYGRLQDSLRRAVEKGSGVVSRGA-GKGGSKCSRGIESNLELSPGAATTEAGKHPLGAVLNNQAESKVGELEGENFALRNMLQDLQREVMELKDYQDRHGDLVSAERG--SIEGGGIW--GGRMS-VDPLAEEVIEGMPADWLERQFGEENARQMKGMRCAVKRVLGEGEQEGGSADDSMSAEDVTSLVSQLREARSLLREQDAIMFAAIFDKPGAGTSAANKDRCMFGGDDGVYLGGSGAWDSLERLEQQREELGKERLKLEADKAKFLEEAVHRDSKSFVFACPPATPT------ADSRYATPVHHHGKA---LGNG-KLTVAAASPAPNGRG----GEAGNLSRMSFTPPTASPDTTKLLGALGI 616          
BLAST of mRNA_L-elsbetiae_contig1164.1424.1 vs. uniprot
Match: A0A4D9D4T5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4T5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.300e-9
Identity = 108/417 (25.90%), Postives = 173/417 (41.49%), Query Frame = 0
Query:  188 DGSDGMRCEDNKSAWIAQNLDVVPQG------AAVEVDQLKQLPGLEECLFELLQE---RARQLSAMEI-LIGELRRREAESTKASHDARALTARLECAEQDRSALERRAQAAGEEHRVDRARWFVHKQELETRCVQLESRDIQYRASIRKKEVEYGRLQDSLRRTVDKSTNFIARGTRGK-----DAT-KGRGIETNLEL-SPGEATTEGGRNPLGGVLNEQAMCKVEELETENAGLRSMLVDLQGEVMDLKGYHDRHGDLV--------------SAGRGRGSIEGGIWSAGGV----------ASPMEPFPEDVIEGMPGDWLERQVGE-------DTAQQIKGMRGALKRVLGDE------DKEGGTGDDSMSQE------DLVSLMSQLREARSLLREQDAIMFAAIFDRPG 544
            +G +     ++   W+ QNL     G      +  E+D+   LP +   L  LL +   RA+ L +  + L+  L    +E+ + SH+  +L  ++E A  DR A E    +   E      RW   K EL  R  +L  +DI  RA ++KK+VEY +LQ  LR     S     + T G      D T K + +  +L    P  A  E  R  L      QA+     L  ENA LR  L  L  EV  L+   DR+GDLV              +  RG+  +   + +  G            S +  F +   + MP +WL + VGE       +  ++ + MR  +    G +      +KEG     S++ E      +L  L ++L+    L+ +Q+ ++  A+F+  G
Sbjct:   56 EGENTESSTEDMFGWLQQNLRTEMLGGESNSLSQAEIDEA--LPMIPRTLLPLLYKLVNRAQMLQSQNMELVFNLNTHRSEAERLSHERASLLNKVESAALDRQAAESLLASVRTEKTASEKRWGEEKNELNGRITRLTWKDITIRAQLKKKDVEYEKLQKQLRLGSATSNGGGTKATSGGRIKNVDITPKAQALGCSLTTHKPTLAPDEASRASLEATYQRQAL-----LLEENAELRDTLQCLYAEVKSLQ---DRYGDLVEEIENCRSRQKEELAKSRGKDPV---LQAPDGEEEDSVLLHRPTSAVRQFHKGAFK-MPAEWLGQAVGEALRADMAELGRRYERMRDMVMEPQGQDAEREKKEKEGTDALGSLTAEKRALRHELRLLRTRLQATEDLVAQQETVIKRALFEETG 458          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1164.1424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU43_ECTSI9.090e-20958.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D4T5_9STRA2.300e-925.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 391..418
NoneNo IPR availableCOILSCoilCoilcoord: 266..293
NoneNo IPR availableCOILSCoilCoilcoord: 571..598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1164contigL-elsbetiae_contig1164:5623..20523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1164.1424.1mRNA_L-elsbetiae_contig1164.1424.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1164 5399..20569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1164.1424.1 ID=prot_L-elsbetiae_contig1164.1424.1|Name=mRNA_L-elsbetiae_contig1164.1424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=697bp
MSDPCSAYPKATAWTFLLDTPAEEGGASATKAPPPGGGGHPRLAAAAAAA
AGVRAAAKKKASLGGSSGGSSGTEEMGAACSKSKAASVANKENMAKVEDM
LLVVPNGGKNEGPDTAESTSLGEIPETLEALEEDPVREGAVLGVGALDST
AFLSPEPEQEEGVAAGDSALVAVENCVAGLRRGGHAGDGSDGMRCEDNKS
AWIAQNLDVVPQGAAVEVDQLKQLPGLEECLFELLQERARQLSAMEILIG
ELRRREAESTKASHDARALTARLECAEQDRSALERRAQAAGEEHRVDRAR
WFVHKQELETRCVQLESRDIQYRASIRKKEVEYGRLQDSLRRTVDKSTNF
IARGTRGKDATKGRGIETNLELSPGEATTEGGRNPLGGVLNEQAMCKVEE
LETENAGLRSMLVDLQGEVMDLKGYHDRHGDLVSAGRGRGSIEGGIWSAG
GVASPMEPFPEDVIEGMPGDWLERQVGEDTAQQIKGMRGALKRVLGDEDK
EGGTGDDSMSQEDLVSLMSQLREARSLLREQDAIMFAAIFDRPGIDGANR
ERCVCGADAGGLGGSGVWDSLERLEQEREEVERERSKLEQDKARFMEEAV
RRDSKNFVYSYPPATPSPGPPAPRDTRYATPTHGSGQKQQQLGGGARLTV
AAASTPTPGRGARGAGDAAGLPLMTFTPPAASPDTTKLLGQLGIKL*
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