prot_L-elsbetiae_contig11617.1403.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig11617.1403.1
Unique Name	prot_L-elsbetiae_contig11617.1403.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	108

Homology

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BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 2.520e-65
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0

Query:    2 RVAYAGSTSKKIYTVDTRDPMSVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRLDEEGLLLAANCFDNTLRV 108
            RVAYAGSTSKKIYTVDTRDPM VVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGR DEEGLLLAANCFDNTLRV
Sbjct:  272 RVAYAGSTSKKIYTVDTRDPMGVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRV 378

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BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot
Match: A0A5D6XXH4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.760e-16
Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 0

Query:    5 YAGSTSKKIYTVDTRDPMSVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYS-LEDPIH--ISHIQASPP-DAGRLDEEGLLLAANCFDNTLRV 108
            + G++   I+ VD+R    VV  W   A VNSL+V  DG  +V+ D+ G + TWD R    +D  S L DP    ISHI ASPP D  R DE+G  LAAN +DN LRV
Sbjct:  196 FFGTSKSCIHQVDSR--ADVVRSWQNDAMVNSLYVSPDGQFIVTGDSKGMLKTWDVRMDACIDDISKLNDPGRHAISHIHASPPVDGRRGDEDGRFLAANSYDNLLRV 301

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BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot
Match: A0A2D4BDQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ6_PYTIN)

HSP 1 Score: 80.1 bits (196), Expect = 2.560e-15
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0

Query:    5 YAGSTSKKIYTVDTRDPMSVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLE-DPIH--ISHIQASPPDAGRL-DEEGLLLAANCFDNTLRV 108
            + G++   I+ +D+R    V  KW   A VNSL+V  DG  V++ D+ G I TWD R    ++  S + DP +  ISHI ASPP  GR  DE+G  LAAN +DN LRV
Sbjct:  211 FLGTSKNAIHMMDSR--AEVCRKWQNNAMVNSLYVSPDGQFVITGDSRGMIKTWDVRMESCIEDISRQNDPGNHAISHIHASPPVDGRSGDEDGRFLAANSYDNILRV 316

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BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot
Match: A0A8K1CHV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHV1_PYTOL)

HSP 1 Score: 77.8 bits (190), Expect = 1.690e-14
Identity = 50/111 (45.05%), Postives = 63/111 (56.76%), Query Frame = 0

Query:    5 YAGSTSKKIYTVDTRDPM---SVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLE-DPIH--ISHIQASPPDAGRL-DEEGLLLAANCFDNTLRV 108
            + G++   I+ VD+R  +   S    W   A VNSL+V  DG  VV+ D+ G I TWD R    ++  S E DP    ISHI ASPP  GR  DE+G  LAAN +DN LRV
Sbjct:  216 FMGTSKSAIHMVDSRADVCRWSDCVTWQNDAMVNSLYVSPDGQFVVTGDSKGMIKTWDVRMESCIEDISRENDPGRHAISHIHASPPVDGRGGDEDGRFLAANSYDNILRV 326

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig11617.1403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5KNQ7_9PHAE	2.520e-65	98.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A5D6XXH4_9STRA	2.760e-16	46.30	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A2D4BDQ6_PYTIN	2.560e-15	44.44	Uncharacterized protein (Fragment) n=1 Tax=Pythium...	[more]
A0A8K1CHV1_PYTOL	1.690e-14	45.05	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..108 e-value: 1.0E-10 score: 43.1
IPR011044	Quinoprotein amine dehydrogenase, beta chain-like	SUPERFAMILY	50969	YVTN repeat-like/Quinoprotein amine dehydrogenase	coord: 1..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig11617	contig	L-elsbetiae_contig11617:1512..3582 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig11617.1403.1	mRNA_L-elsbetiae_contig11617.1403.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig11617 1512..3583 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig11617.1403.1 ID=prot_L-elsbetiae_contig11617.1403.1|Name=mRNA_L-elsbetiae_contig11617.1403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
GRVAYAGSTSKKIYTVDTRDPMSVVAKWNCGAFVNSLHVYSDGSKVVSAD
ASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRLDEEGLLLAAN
CFDNTLRV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011044	Quino_amine_DH_bsu