prot_L-elsbetiae_contig11617.1402.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11617.1402.1
Unique Nameprot_L-elsbetiae_contig11617.1402.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length93
Homology
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 3.290e-56
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 93
            HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYP+SQVACLEGHRQLISD+CWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV
Sbjct:  138 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 230
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.480e-26
Identity = 53/93 (56.99%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 93
            HTAAVY   FSP  +LVAS GFDRT+RLWEG YP SQVACL  HRQL+SD                      DTETGQRV N+L LEG++QCV
Sbjct:   80 HTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSDXXXXXXXXXXXXXXXXXXXXXXDTETGQRVNNVLRLEGMLQCV 172
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.650e-16
Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQ--VACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 93
            H  AVY  KFSP   L+AS   D  + LW+    F+Q  +A L  H QL+ D+ W+ D RSLLSAS+D TV  WDT+ GQ + N + + GLVQ V
Sbjct:  118 HGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVNLWDTDKGQLL-NSIGVNGLVQTV 211
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 82.4 bits (202), Expect = 2.290e-16
Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 0 
Query:    4 AVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQ--VACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 93
            AVY  KFSP   L+AS   D  + LW+    F+Q  +A L  H QLI DI W+ D RSLLSAS+D TV  WDT+ GQ V N + + GLVQ V
Sbjct:  134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVNLWDTDKGQLV-NSVGVNGLVQTV 224
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A7S1NRB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRB8_9EUGL)

HSP 1 Score: 64.3 bits (155), Expect = 5.120e-11
Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 0 
Query:    5 VYVAKFSPRDSLVASAGFDRTLRLWEGAY-PFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRVG 81
            +Y A FSP  SL+A  G+D  + LW GA      +  L GH   +S + +APDGR+LLSAS D TV  W   TG+  G
Sbjct:    2 IYGADFSPDGSLLALGGWDGRVSLWGGANGALCLLRTLTGHTGFVSALAFAPDGRTLLSASGDATVRVWCPATGESAG 79
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A1A0HJF3_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJF3_9ASCO)

HSP 1 Score: 66.2 bits (160), Expect = 8.750e-11
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVA----CLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRV 80
            HT AV+  +FS     +ASAG DRT+RLW         A     +EGH++ I+ + W    + +LSAS D TV+ WD ETGQR+
Sbjct:   27 HTGAVFSIEFSADGHNIASAGMDRTIRLWNLPTTADNEAPNYGVIEGHKKAITSLSWILSSK-ILSASADSTVSVWDAETGQRL 109
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE)

HSP 1 Score: 65.9 bits (159), Expect = 1.600e-10
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRV 80
            H  AVY   FSP   ++A+AGFDR + +W        +  L+GH   +  + WA     L S S D+TVA WD  TG+RV
Sbjct:   77 HAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKTVAVWDGNTGERV 156
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BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A512UMM7_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UMM7_9ASCO)

HSP 1 Score: 63.9 bits (154), Expect = 5.980e-10
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVA----CLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRV 80
            H+ AV+  KFSP    +ASAG DRT+RLW      ++ +     +EGH+  ++ + W    + +LS S D TV+ WD ETGQR+
Sbjct:   27 HSGAVFSVKFSPDGQHIASAGTDRTIRLWNLPTRANEESPNYGVIEGHKGGLTALSWLSQSK-ILSTSADSTVSIWDAETGQRL 109
[Close]
BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A4P6XGR8_9ASCO (Prp8 binding protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XGR8_9ASCO)

HSP 1 Score: 62.4 bits (150), Expect = 2.200e-9
Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLW----EGAYPFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRV 80
            H  A    KFSP    +ASAG DRT+RLW    +          +EGH+  ++ + W    + + + S D TVA WD ETGQRV
Sbjct:   36 HEGAALCVKFSPDGQNIASAGLDRTIRLWNLPTDAKDEVPNYGVIEGHKGAVTCLDWLAQSK-IFTGSADSTVAFWDAETGQRV 118
[Close]
BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Match: A0A1F8TEC6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_62_14 TaxID=1797671 RepID=A0A1F8TEC6_9CHLR)

HSP 1 Score: 62.0 bits (149), Expect = 3.680e-9
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0 
Query:    1 HTAAVYVAKFSPRDSLVASAGFDRTLRLWE------GAYPFSQVACLEGHRQLISDICWAPDGRSLLSASFDQTVAKWDTETGQRV 80
            H   ++    SP + L+A+A  DR+++LW       G Y  ++V  L GH      + +APDGR+L SAS+D TV  WD  TG  +
Sbjct:  904 HPTWIWDIAVSPTEGLMATASADRSIKLWRLELDARGIYSATEVRTLTGHTATDYGVDFAPDGRTLASASWDGTVRLWDVSTGSEL 989
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11617.1402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE3.290e-5697.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSR1_9STRA1.480e-2656.99WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1V9Z1V2_9STRA1.650e-1647.37Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QW05_SAPDV2.290e-1651.09Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S1NRB8_9EUGL5.120e-1144.87Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A1A0HJF3_9ASCO8.750e-1142.86Uncharacterized protein n=1 Tax=Metschnikowia bicu... [more]
A9V9T1_MONBE1.600e-1040.00Lactoylglutathione lyase n=1 Tax=Monosiga brevicol... [more]
A0A512UMM7_9ASCO5.980e-1040.48Uncharacterized protein n=1 Tax=Metschnikowia sp. ... [more]
A0A4P6XGR8_9ASCO2.200e-939.29Prp8 binding protein n=1 Tax=Metschnikowia aff. pu... [more]
A0A1F8TEC6_9CHLR3.680e-937.21Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..73
e-value: 4.3E-7
score: 39.6
coord: 1..30
e-value: 1.8
score: 15.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 5..29
e-value: 0.0069
score: 17.2
coord: 37..73
e-value: 1.1E-4
score: 22.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..82
score: 14.485
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..30
score: 13.015
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..93
e-value: 4.7E-24
score: 87.0
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 1..91
NoneNo IPR availablePANTHERPTHR44129:SF8coord: 1..91
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 17..31
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..82
score: 20.593
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11617contigL-elsbetiae_contig11617:589..1391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11617.1402.1mRNA_L-elsbetiae_contig11617.1402.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11617 589..1391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11617.1402.1 ID=prot_L-elsbetiae_contig11617.1402.1|Name=mRNA_L-elsbetiae_contig11617.1402.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISD
ICWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf