prot_L-elsbetiae_contig11377.1210.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11377.1210.1
Unique Nameprot_L-elsbetiae_contig11377.1210.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: D7FQX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX1_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.070e-21
Identity = 64/136 (47.06%), Postives = 68/136 (50.00%), Query Frame = 0
Query:    1 VFGASDEAAGRAGAGSASIIGSVQATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGP 136
            VFGASDEA G A  G AS IGS+QATA                                                           +ECVICLT+PK+TLLLPCRHLCVC ECFRHVDKCPVCRS FDNYIVLS P
Sbjct:  646 VFGASDEAGGAARPGLASNIGSIQATASRGAGAGGLGAGEEVP-------------------------------------------EECVICLTDPKNTLLLPCRHLCVCTECFRHVDKCPVCRSAFDNYIVLSAP 738          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A6H5K7X0_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X0_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.850e-21
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:   87 DECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGP 136
            +ECVICLT+PK+TLLLPCRHLCVC ECFRHVDKCPVCRS FDNYIVLS P
Sbjct:  687 EECVICLTDPKNTLLLPCRHLCVCTECFRHVDKCPVCRSAFDNYIVLSAP 736          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S2AX55_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AX55_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.580e-18
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   87 DECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLS 134
            +EC ICLTEPK T LLPCRHLCVC  CF+ +DKCPVCR+PF+ YIV +
Sbjct:   69 EECTICLTEPKDTTLLPCRHLCVCSTCFKQIDKCPVCRAPFETYIVFN 116          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A835Z5X0_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 8.500e-18
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:   88 ECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGPP 137
            +CVICLTE K+ +LLPCRHLCVC+ CFRH+DKCPVCRS FDNY+ +   P
Sbjct:   17 DCVICLTEEKAFMLLPCRHLCVCKACFRHIDKCPVCRSAFDNYLQVDPAP 66          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S2SVW1_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVW1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.110e-17
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:   88 ECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGPP 137
            +CV+CLTE K T+LLPCRHLCVC+ CFR +DKCPVCR+PF+ Y+V +  P
Sbjct:    5 KCVVCLTEAKDTILLPCRHLCVCRHCFRQIDKCPVCRTPFETYMVFTDKP 54          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S1CHK6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHK6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.000e-16
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0
Query:   88 ECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGP 136
            +C++C+TE KS +LLPCRHLCVCQECF H+DKCPVCR+ +D Y+V   P
Sbjct:  116 DCLVCMTEKKSVVLLPCRHLCVCQECFTHIDKCPVCRTVYDGYMVFQWP 164          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S2XYA7_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.350e-16
Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = 0
Query:   87 DECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYI 131
            DEC +CLT+PK   LLPCRH+CVC+ECFRH+ +CPVCRSPF++Y+
Sbjct:  178 DECTVCLTDPKDVALLPCRHVCVCRECFRHISRCPVCRSPFEDYL 222          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S2SWX2_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWX2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.460e-16
Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 0
Query:   87 DECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGPP 137
            +ECV+CLTE K T+LLPCRHLCVC+ CFR +DKCPVCR+PF+ Y+V +  P
Sbjct:  471 EECVVCLTEAKDTILLPCRHLCVCRHCFRQIDKCPVCRTPFETYMVFTDKP 521          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A8J5WZS5_DIALT (RING-type E3 ubiquitin transferase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5WZS5_DIALT)

HSP 1 Score: 80.9 bits (198), Expect = 1.150e-13
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:   88 ECVICLTEPKSTLLLPCRHLCVCQECFRHVDKCPVCRSPFDNYI 131
            ECVICL+EPKS LLLPCRHLC C +CF  VDKCPVCR+ FD+++
Sbjct:  700 ECVICLSEPKSVLLLPCRHLCCCHDCFTQVDKCPVCRTEFDSFV 743          
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Match: A0A7S3C5X0_9EUKA (RING-type E3 ubiquitin transferase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C5X0_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 1.450e-13
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:   88 ECVICLTEPKSTLLLPCRHLCVCQECF-RHVDKCPVCRSPFDNYIVLSGP 136
            +CVICLTEP+ T+LLPCRHLC+CQ CF R  D+CPVCR+PF +Y+  + P
Sbjct:   86 DCVICLTEPRDTILLPCRHLCLCQACFERSDDRCPVCRAPFQSYLRFTTP 135          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11377.1210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX1_ECTSI2.070e-2147.06RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5K7X0_9PHAE3.850e-2188.00RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A7S2AX55_9STRA6.580e-1870.83RING-type E3 ubiquitin transferase n=1 Tax=Dictyoc... [more]
A0A835Z5X0_9STRA8.500e-1870.00RING-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7S2SVW1_9STRA1.110e-1766.00RING-type E3 ubiquitin transferase n=1 Tax=Rhizoch... [more]
A0A7S1CHK6_9STRA2.000e-1665.31RING-type E3 ubiquitin transferase n=1 Tax=Bicosoe... [more]
A0A7S2XYA7_9STRA2.350e-1668.89RING-type E3 ubiquitin transferase n=1 Tax=Fibroca... [more]
A0A7S2SWX2_9STRA4.460e-1666.67RING-type E3 ubiquitin transferase n=1 Tax=Rhizoch... [more]
A0A8J5WZS5_DIALT1.150e-1372.73RING-type E3 ubiquitin transferase n=1 Tax=Diacron... [more]
A0A7S3C5X0_9EUKA1.450e-1364.00RING-type E3 ubiquitin transferase n=1 Tax=Haptoli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 89..123
e-value: 0.008
score: 25.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 89..124
score: 11.648
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 80..133
e-value: 1.1E-16
score: 61.9
IPR017066E3 ubiquitin-protein ligase BOI-likePIRSFPIRSF036836SBP1_RNase_bindcoord: 12..129
e-value: 1.6E-14
score: 52.3
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 86..128
e-value: 2.7E-14
score: 52.7
NoneNo IPR availablePANTHERPTHR22996:SF0E3 UBIQUITIN-PROTEIN LIGASE LOG2-RELATEDcoord: 80..131
NoneNo IPR availablePANTHERPTHR22996MAHOGUNINcoord: 80..131
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 84..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11377contigL-elsbetiae_contig11377:971..1744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11377.1210.1mRNA_L-elsbetiae_contig11377.1210.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11377 971..3057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11377.1210.1 ID=prot_L-elsbetiae_contig11377.1210.1|Name=mRNA_L-elsbetiae_contig11377.1210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
VFGASDEAAGRAGAGSASIIGSVQATAGGGSSSSTAGGGGSSSSTVGTGG
NNNANGGGGRHEHEHLPSAGTGGGGGGGGGAEEDDQDECVICLTEPKSTL
LLPCRHLCVCQECFRHVDKCPVCRSPFDNYIVLSGPPEPPPPQQASAAAP
SAAVLVTGGSASGAGDELAASGLGGAGAAPPARPAAGGNSSSPSRQQPGV
GGRTSRRGSGGRASGGGGGNGEEEEGETGQDSSAELSGAVPAQRNIFAVS
RRRVAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017066E3ligase_BOI-like