prot_L-elsbetiae_contig1137.1204.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1137.1204.1
Unique Nameprot_L-elsbetiae_contig1137.1204.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length489
Homology
BLAST of mRNA_L-elsbetiae_contig1137.1204.1 vs. uniprot
Match: A0A6H5K407_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K407_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 2.030e-81
Identity = 258/533 (48.41%), Postives = 299/533 (56.10%), Query Frame = 0
Query:    6 ASPTSSQGSWVVDPEEGWGGLGAV-----------PVPRSPVNPQQR--RFSPASPSS-LRGWAQVPVSPPAAEYPAMMANI-HSPPASPGSSSXXXXXXXXXXXXXXA---RAAAGEGLVALARDQDQN--------------ASLMDISXXXXXXXXXXXXXXXXXXXGVVQRSLPFETFEAFETPGTGGFGRDSGXXXXXXXXWADGARAGVEV---GVGCTTVDDVNEMEMDVADFEHADSPGEHEHAFVMRAAPGMTAAEAVEAIAEAAELRGITPTSVVLSHTQVSPSRLSSGTGGRSTSGGASPPLTPQETKETDGRAQEQEIMFRHGLG----------YRSVTPPQNPSPSSARAXXXXXXXXXGVAGVPDVDAAPIQRGSVGSGTG-TCIPMDATAVGI-VDVDVEVGGKYDGKQMDRLWRWTGLITAAKMGVIPIIVCATVAALSTQAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXTRCFSKRRPXXXXXXXXXFPDARIDRC---GMPIPYCVAPSVACA 488
            +SPTSSQGSWVVDP++GW   G+             VP SP +P++   R +P SPSS LR WAQVP+SPPAAEYPAM  +  +SPP SPGS                    R+ AGEGLVALARD++                + +MD S                    +  RSLP ETFEA E  G  G    +G         A  A  G +    GVG  T        MDV+ F     P   + AFVM AAPGMTAAEAVEAIAEAAEL GITPTSVVLS T +SPSR SSG                      +G  + Q + FR   G          +R+  P +N S S+A   XXXXX   GVA VPD+DA+  +  +V + +G T IPMD TAVG+ VDVD +V G YD     RLWRWTG +TAAKMGVIPIIVCATVAALSTQ+  G   XXXXXXXXXXXXXXXXXXX    TRC S+   XXXXXXX  FPD RIDRC   GMP+PYCVAPSVACA
Sbjct:   27 SSPTSSQGSWVVDPDDGWDDSGSTNVGPNELPPSAAVPPSPESPRREHHRRTPLSPSSPLRSWAQVPMSPPAAEYPAMTTSTANSPPPSPGSVRSLKSVGSVSSDGGGGSSRRSVAGEGLVALARDENPTLDTTGALLLTPRLASKVMDTSDSAAPTGAVSRSPAV-----LAPRSLPLETFEALEAQGFSGAWGGAG---------AGSASTGQDREVDGVGAATAG------MDVSGF-----PDPADEAFVMTAAPGMTAAEAVEAIAEAAELTGITPTSVVLSRTTMSPSRASSG-----------------RPSPNEGEEKAQGVTFRRAHGSPAATAAAARFRAREPLRNLSSSTANTAXXXXX---GVARVPDIDASRDESVTVPAASGSTYIPMD-TAVGMGVDVD-DVDGTYD-----RLWRWTGFLTAAKMGVIPIIVCATVAALSTQSSSGDRGXXXXXXXXXXXXXXXXXXXG---TRCSSRXXXXXXXXXXGCFPDVRIDRCVYGGMPMPYCVAPSVACA 504          
BLAST of mRNA_L-elsbetiae_contig1137.1204.1 vs. uniprot
Match: D7FYP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP0_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 4.850e-70
Identity = 257/516 (49.81%), Postives = 295/516 (57.17%), Query Frame = 0
Query:    6 ASPTSSQGSWVVDPEEGWGGLGAV-----------PVPRSPVNPQQRRFSPASPSS--LRGWAQVPVSPPAAEYPAMMANI-HSPPASPGS--SSXXXXXXXXXXXXXXARAAAGEGLVALARDQDQN--------ASLMDISXXXXXXXXXXXXXXXXXXXGVVQRSLPFETFEAFETPG-TGGFGRDSGXXXXXXXXWADGARAGVEV-GVGCTTVDDVNEMEMDVADFEHADSPGEHEHAFVMRAAPGMTAAEAVEAIAEAAELRGITPTSVVLSHTQVSPSRLSSGTGGRSTSGGASPPLTPQETKETDGRAQEQEIMFRHGLGYRSVTPPQNPSPSSARAXXXXXXXXXGVAGVPDVDAAPIQRGSVGSGTG-TCIPMDATAVGIVDVDVEVG---GKYDGKQMDRLWRWTGLITAAKMGVIPIIVCATVAALSTQAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXTRCFSKRRPXXXXXXXXXFPDARIDRC---GMPIPYCVAPSVACA 488
            +SPTSSQGSWVVDP++GW   G+             VP SP +P+       +PSS  LR WAQVP+SPPAAEYPAM  N  +SPP SPGS  S                 + AGEGLVALARD++          +++MD S                    +V R LPFETFEA E  G +G +GR            +     G EV GVG  T        MDV+ F  AD   E   AFVM AAPGMTAAEAVEAIAEAAEL G+TPTSVVLS T VSPSR SSG    +     +  +T +    +   A       R    +R+  P +N S SS   XXXXXXXXX    VPD+D +     +V + +G TCIPMD TAVG+           G YD     RLWRWTG +TAAKMGVIPIIVCATVAALSTQ+   XXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXX FPD RIDRC   GMP+PYCVAPSVACA
Sbjct:   26 SSPTSSQGSWVVDPDDGWDDSGSANVSPNELAPSAAVPPSPESPRGEHHGRTTPSSSPLRSWAQVPMSPPAAEYPAMTTNTANSPPPSPGSVRSLKSAGSVSSGGGGSSRGSVAGEGLVALARDENPTPDTTPPLTSNVMDTSDSAAPRAVGSHSSHSPAV--LVPRLLPFETFEALEAQGFSGAWGRAGAG--------SASTGQGREVDGVGAATAG------MDVSGF--ADPADE---AFVMTAAPGMTAAEAVEAIAEAAELTGVTPTSVVLSRTTVSPSRASSGRPSPNEGEEKAEGVTFRRANSSPTAAXXXXXXXR----FRAREPLRNLSASSTANXXXXXXXXX--XRVPDIDPSRDDSVTVPAASGSTCIPMD-TAVGMXXXXXXXXXXXGTYD-----RLWRWTGFLTAAKMGVIPIIVCATVAALSTQS---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFPDVRIDRCVYGGMPMPYCVAPSVACA 505          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1137.1204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K407_9PHAE2.030e-8148.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP0_ECTSI4.850e-7049.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1137contigL-elsbetiae_contig1137:11909..14447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1137.1204.1mRNA_L-elsbetiae_contig1137.1204.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1137 11909..14447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1137.1204.1 ID=prot_L-elsbetiae_contig1137.1204.1|Name=mRNA_L-elsbetiae_contig1137.1204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=489bp
MTVTAASPTSSQGSWVVDPEEGWGGLGAVPVPRSPVNPQQRRFSPASPSS
LRGWAQVPVSPPAAEYPAMMANIHSPPASPGSSSSVRSVSSSGSTGSGAR
AAAGEGLVALARDQDQNASLMDISDVSSSSSSSFSSSAAGAAGGVVQRSL
PFETFEAFETPGTGGFGRDSGGLGRGAGAWADGARAGVEVGVGCTTVDDV
NEMEMDVADFEHADSPGEHEHAFVMRAAPGMTAAEAVEAIAEAAELRGIT
PTSVVLSHTQVSPSRLSSGTGGRSTSGGASPPLTPQETKETDGRAQEQEI
MFRHGLGYRSVTPPQNPSPSSARASASAAAAVAGVAGVPDVDAAPIQRGS
VGSGTGTCIPMDATAVGIVDVDVEVGGKYDGKQMDRLWRWTGLITAAKMG
VIPIIVCATVAALSTQAGGGSGGDRGEGGRGGGGGGGGGARGGGGGTRCF
SKRRPRGGGGGSGCFPDARIDRCGMPIPYCVAPSVACA*
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