prot_L-elsbetiae_contig11361.1198.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11361.1198.1
Unique Nameprot_L-elsbetiae_contig11361.1198.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
BLAST of mRNA_L-elsbetiae_contig11361.1198.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.800e-8
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    5 FDINTCKQYAETHERNLATERHHVYKSIIDSVDNGVGKPYMIDAPAGPGKTYTEKCIC 62
            FD      + + H  NL  E+ HVY +++ SV +G    +MIDAPAG GKTYTE  +C
Sbjct:  276 FDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILC 333          
BLAST of mRNA_L-elsbetiae_contig11361.1198.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.800e-8
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    5 FDINTCKQYAETHERNLATERHHVYKSIIDSVDNGVGKPYMIDAPAGPGKTYTEKCIC 62
            FD      + + H  NL  E+ HVY +++ SV +G    +MIDAPAG GKTYTE  +C
Sbjct:  439 FDPAQMSAFVDEHLANLTHEQRHVYDTVVSSVTSGASNLFMIDAPAGTGKTYTESILC 496          
BLAST of mRNA_L-elsbetiae_contig11361.1198.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.510e-6
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    4 AFDINTCKQYAETHERNLATERHHVYKSIIDSVDNGVGKPYMIDAPAGPGKTYTEKCI 61
            AFD +    YA+  E  L + +  VY +++D+V N   +P+MIDAPAG GK++TEK I
Sbjct:    4 AFDPSAQTAYADRFEPGLTSGQRVVYNAVVDAVRNNQPQPFMIDAPAGTGKSHTEKVI 61          
BLAST of mRNA_L-elsbetiae_contig11361.1198.1 vs. uniprot
Match: A0A821UJI5_9NEOP (ATP-dependent DNA helicase n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821UJI5_9NEOP)

HSP 1 Score: 47.4 bits (111), Expect = 7.280e-5
Identity = 21/68 (30.88%), Postives = 36/68 (52.94%), Query Frame = 0
Query:    1 MEDAFDINTCKQYAETHERNLATERHHVYKSIIDSVDNGVGKPYMIDAPAGPGKTYTEKCICLWTRHS 68
            M   ++ N    +   +   L  ++ H Y++I+DSV+N +G+ + +DAP G GKT+    I    R S
Sbjct:    1 MVQQYNSNDLTAFVNDNVPKLVPDQRHAYETIVDSVNNNMGRLFFLDAPGGTGKTFLANLILAKIRQS 68          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11361.1198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JZJ6_9PHAE3.800e-844.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0I5_9PHAE3.800e-844.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JVN5_9PHAE1.510e-644.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A821UJI5_9NEOP7.280e-530.88ATP-dependent DNA helicase n=1 Tax=Pieris macdunno... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11361contigL-elsbetiae_contig11361:4561..4878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11361.1198.1mRNA_L-elsbetiae_contig11361.1198.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11361 4260..4878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11361.1198.1 ID=prot_L-elsbetiae_contig11361.1198.1|Name=mRNA_L-elsbetiae_contig11361.1198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MEDAFDINTCKQYAETHERNLATERHHVYKSIIDSVDNGVGKPYMIDAPA
GPGKTYTEKCICLWTRHSLQTEASQITLLIQTATTSSPRTRTRVDRKADT
HSPTT*
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