prot_L-elsbetiae_contig11353.1189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11353.1189.1
Unique Nameprot_L-elsbetiae_contig11353.1189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length109
Homology
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.290e-42
Identity = 82/103 (79.61%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    7 IRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            I+PKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFR+LEQ       + +P +K  GVF   V+HVLAVATTVEVILLAVT+
Sbjct:   65 IQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQV--IVTVALVPPKK--GVFNKEVEHVLAVATTVEVILLAVTY 163          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A7S1Y049_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y049_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.200e-16
Identity = 45/101 (44.55%), Postives = 64/101 (63.37%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            +P AL+ +   ++CM+FMGLLPE+  AW+++DN LYLW+Y         DF  F  L+Q       + +P +   GVF+  VK+VLAVAT VEV+LLA+ F
Sbjct:    5 VPPALTEQYRSLKCMSFMGLLPEVRCAWVSIDNRLYLWDYEAARARGEADFLAFDGLDQI--IVSVALVPPRP--GVFRSKVKYVLAVATAVEVVLLALAF 101          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A2G5BCU2_COERN (Nucleoporin-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCU2_COERN)

HSP 1 Score: 82.8 bits (203), Expect = 3.390e-16
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LP+AL  + D +EC  FMGL P+I  AW+TVD+ L+LWNY  + DF  F D EQ       S    +   GVF D++KHVL VAT +EV LL V++
Sbjct:   62 LPDALFEQYDLLECRCFMGLFPDIRRAWITVDHRLFLWNYEDESDFYSFEDQEQ----IIVSVAMVKPKPGVFVDSIKHVLVVATPLEVFLLGVSY 153          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A1Y1VY37_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VY37_9FUNG)

HSP 1 Score: 82.0 bits (201), Expect = 6.300e-16
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LP+AL  + D +EC  FMGL PEI  AW+TVD+ L+LWNY  + DF  F D EQ       S    +   GVF D++K+VLAVAT +EV LL + +
Sbjct:   63 LPDALFEQYDLLECRCFMGLFPEIQRAWITVDHRLFLWNYEDESDFYSFEDQEQ----IIVSVALVKPKPGVFIDSIKYVLAVATPLEVFLLGIKY 154          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A7S3A661_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A661_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 9.320e-16
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LP+AL  +   +EC +FMG+ PEI  AW TVDN L+LWNY T  DF  F  ++Q       S    +   GVF + VK++LAV+TTVEV+LL V F
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQ----IITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCF 138          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A7S3ELT5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELT5_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 1.110e-15
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LP+AL  +   +EC +FMG+ PEI  AW TVDN L+LWNY T  DF  F  ++Q       S    +   GVF + VK++LAV+TTVEV+LL V F
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQ----IITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCF 138          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A7S0BDF8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDF8_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 1.160e-15
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LP+AL  +   +EC +FMG+ PEI  AW TVDN L+LWNY T  DF  F  ++Q       S    +   GVF + VK++LAV+TTVEV+LL V F
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQ----IITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCF 138          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.170e-15
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            +P AL+ +   ++CM+FMGLLPEI  AW+++DN L+LWNY         DF +F  L+Q       + +P +   GVF++ VK++LAVAT VE++LLAV F
Sbjct:   31 VPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQI--IVSVALVPPRP--GVFREKVKYLLAVATAVEIVLLAVAF 127          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: A0A261XXE4_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXE4_9FUNG)

HSP 1 Score: 79.7 bits (195), Expect = 4.070e-15
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAV 107
            LP A+ ++ D ++C +FMGLLPEI+ AW+TVDN L+LWNY    DF  F D +Q         +P ++   VF D +++VL +ATT+E+ILL V
Sbjct:   70 LPNAIVQQYDILQCRSFMGLLPEINRAWITVDNKLFLWNYIDGTDFYSFEDQDQI--IVSVGLVPPKR--DVFVDGIEYVLVIATTLEIILLGV 159          
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA)

HSP 1 Score: 77.0 bits (188), Expect = 3.620e-14
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   15 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTVEVILLAVTF 109
            LPE L +    +EC  F+GL PEI+ AW+TVDN L LWNY ++++  + D +Q         +P ++   VF + VK+VL +AT VE++LLAV F
Sbjct:   96 LPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQI--IVSVGLIPPKR--DVFSEDVKYVLVLATPVEIVLLAVWF 186          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11353.1189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI2.290e-4279.61Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A7S1Y049_9STRA3.200e-1644.55Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2G5BCU2_COERN3.390e-1647.92Nucleoporin-domain-containing protein n=1 Tax=Coem... [more]
A0A1Y1VY37_9FUNG6.300e-1647.92Nucleoporin-domain-containing protein n=1 Tax=Lind... [more]
A0A7S3A661_9RHOD9.320e-1647.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ELT5_9RHOD1.110e-1547.92Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0BDF8_9RHOD1.160e-1547.92Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7R9YE90_9STRA1.170e-1544.55Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A261XXE4_9FUNG4.070e-1545.74Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
L8HDY8_ACACA3.620e-1443.16Nucleoporin, putative n=1 Tax=Acanthamoeba castell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 6..109
e-value: 6.1E-19
score: 68.1
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 9..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11353contigL-elsbetiae_contig11353:157..940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11353.1189.1mRNA_L-elsbetiae_contig11353.1189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11353 157..940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11353.1189.1 ID=prot_L-elsbetiae_contig11353.1189.1|Name=mRNA_L-elsbetiae_contig11353.1189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp
RSFLKKIRPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLY
LWNYHTQDFTQFRDLEQARCFFRCSELPSQKAGGVFQDAVKHVLAVATTV
EVILLAVTF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155