prot_L-elsbetiae_contig11338.1179.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig11338.1179.1
Unique Name	prot_L-elsbetiae_contig11338.1179.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	131

Homology

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.720e-73
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQK-ENVAAVNEALSELYIEDEDHE 131
            KVLRACERALLWDEAVYLYKED QYDS VKTMIDHCVCF HELFLDCV KVRNQEVNYKAI+FYLEQHPLKLVRLL VLTPNLDHSRVVHQLR+AENLPLAIDYLKSVQK ENVAAVNEALSELYIEDEDHE
Sbjct: 1333 KVLRACERALLWDEAVYLYKEDAQYDSAVKTMIDHCVCFKHELFLDCVTKVRNQEVNYKAITFYLEQHPLKLVRLLTVLTPNLDHSRVVHQLRKAENLPLAIDYLKSVQKKENVAAVNEALSELYIEDEDHE 1464

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.110e-65
Identity = 104/131 (79.39%), Postives = 122/131 (93.13%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            KVLRACERALLWDEAVYLYKEDGQ+DS V+ MI+HC  + H+LF++CVQKVRNQE+ Y+AI FY+EQHPL LVRLL+VLTP+LDH+RVVHQLR+AENLPLA +YL+SVQKEN+AAVNEAL+ELYIEDEDHE
Sbjct: 1375 KVLRACERALLWDEAVYLYKEDGQHDSAVRAMIEHCTAWKHDLFIECVQKVRNQEIYYRAIGFYMEQHPLDLVRLLKVLTPHLDHARVVHQLRKAENLPLATEYLQSVQKENIAAVNEALNELYIEDEDHE 1505

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A7S2V2H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2H1_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.450e-61
Identity = 95/131 (72.52%), Postives = 115/131 (87.79%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            K+LRACE+AL+WDEAVYLYK DGQ+D+ VKTMI+H VCF  +LFLDC+QK RNQE+ YKA+ FYL+Q+P+ L RLLQVLTP LDH+RVVHQ+R+AE+L L   YLKSVQKEN+ AVNEAL+ELYIEDED+E
Sbjct:   26 KLLRACEKALMWDEAVYLYKADGQHDNAVKTMIEHSVCFQADLFLDCIQKARNQEMYYKAVGFYLDQYPMLLERLLQVLTPQLDHARVVHQMRKAEHLHLVKGYLKSVQKENLTAVNEALNELYIEDEDYE 156

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A024U3J7_9STRA (Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U3J7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.650e-61
Identity = 96/131 (73.28%), Postives = 120/131 (91.60%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            K+LRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH V F H+LFLDC+QKVRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+++NLPL +DYLK VQKEN++AVNEAL+E+ +EDED++
Sbjct: 1359 KILRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPVAFAHDLFLDCIQKVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKSDNLPLVVDYLKDVQKENLSAVNEALNEILVEDEDYQ 1489

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A2P4XMC0_9STRA (Clathrin heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMC0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.350e-61
Identity = 93/131 (70.99%), Postives = 121/131 (92.37%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            K+LRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH + F+H+LFLDC+QKVRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+++NLPL ++YLK VQKEN++AVNEAL+E+ ++DED++
Sbjct:  619 KILRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPIAFSHDLFLDCIQKVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKSKNLPLVVEYLKDVQKENLSAVNEALNEILVDDEDYQ 749

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A225V906_9STRA (Clathrin heavy chain (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V906_9STRA)

HSP 1 Score: 211 bits (537), Expect = 7.300e-61
Identity = 94/131 (71.76%), Postives = 121/131 (92.37%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            K+LRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH V F+H+LFLDC+QKVRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+++NLPL ++YLK VQKEN++AVNEAL+E+ ++DED++
Sbjct:  955 KILRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPVAFSHDLFLDCIQKVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKSKNLPLVVEYLKDVQKENLSAVNEALNEILVDDEDYQ 1085

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 210 bits (535), Expect = 1.450e-60
Identity = 96/130 (73.85%), Postives = 117/130 (90.00%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDH 130
            KVLRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH V F H+LFLDC+QKVRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+  NLPL ++YLK VQKEN++AVNEAL+E+ +EDED+
Sbjct: 1362 KVLRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPVAFAHDLFLDCIQKVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKTHNLPLVVEYLKDVQKENLSAVNEALNEILVEDEDY 1491

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A3R6ZXA9_9STRA (Clathrin-link domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZXA9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.990e-60
Identity = 94/130 (72.31%), Postives = 119/130 (91.54%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDH 130
            K+LRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH V F H+LFLDC+Q+VRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+++NLPL ++YLK VQKEN++AVNEAL+E+ +EDED+
Sbjct: 1895 KILRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPVAFAHDLFLDCIQRVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKSDNLPLVVEYLKDVQKENLSAVNEALNEILVEDEDY 2024

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A5D6XWJ0_9STRA (Clathrin-link domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWJ0_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.740e-60
Identity = 95/130 (73.08%), Postives = 117/130 (90.00%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDH 130
            KVLRACE+ L WD AVYLYKEDGQ+D+ V+TM+DH V F+H+LFLDC+QKVRNQE++YKAI FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+  NLPL ++YLK VQKEN++AVNEAL+E+ ++DED+
Sbjct: 1362 KVLRACEKGLHWDHAVYLYKEDGQFDNAVRTMVDHPVAFSHDLFLDCIQKVRNQEIHYKAIHFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKTSNLPLVVEYLKDVQKENLSAVNEALNEILVDDEDY 1491

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BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Match: A0A2D4BEN2_PYTIN (Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BEN2_PYTIN)

HSP 1 Score: 209 bits (532), Expect = 3.690e-60
Identity = 95/131 (72.52%), Postives = 118/131 (90.08%), Query Frame = 0

Query:    1 KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQKVRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPLAIDYLKSVQKENVAAVNEALSELYIEDEDHE 131
            KVLRACE+ L WD AVY YKEDGQ+D+ V+TM+DH V F H+LFLDC+QKVRNQE++YKAI+FYLEQHPL+L RLLQVLTPNLDH+RVVHQLR+A NLPL ++YLK VQKEN++AVNEAL+E+ ++DED++
Sbjct: 1765 KVLRACEKGLHWDHAVYXYKEDGQFDNAVRTMVDHPVAFAHDLFLDCIQKVRNQEIHYKAINFYLEQHPLELTRLLQVLTPNLDHARVVHQLRKANNLPLVVEYLKDVQKENLSAVNEALNEILVDDEDYQ 1895

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig11338.1179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWD1_ECTSI	1.720e-73	93.94	Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A835YZH1_9STRA	7.110e-65	79.39	Clathrin heavy chain n=1 Tax=Tribonema minus TaxID...	[more]
A0A7S2V2H1_9STRA	1.450e-61	72.52	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A024U3J7_9STRA	1.650e-61	73.28	Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxI...	[more]
A0A2P4XMC0_9STRA	5.350e-61	70.99	Clathrin heavy chain n=1 Tax=Phytophthora palmivor...	[more]
A0A225V906_9STRA	7.300e-61	71.76	Clathrin heavy chain (Fragment) n=1 Tax=Phytophtho...	[more]
K3WLC2_GLOUD	1.450e-60	73.85	Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ...	[more]
A0A3R6ZXA9_9STRA	1.990e-60	72.31	Clathrin-link domain-containing protein n=8 Tax=Ap...	[more]
A0A5D6XWJ0_9STRA	2.740e-60	73.08	Clathrin-link domain-containing protein n=1 Tax=Py...	[more]
A0A2D4BEN2_PYTIN	3.690e-60	72.52	Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 Re...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..131 e-value: 1.6E-43 score: 150.9
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PFAM	PF00637	Clathrin	coord: 1..71 e-value: 1.3E-9 score: 38.1 coord: 76..129 e-value: 1.3E-7 score: 31.6
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 76..131 score: 13.026
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 1..73 score: 17.214
None	No IPR available	PANTHER	PTHR10292	CLATHRIN HEAVY CHAIN RELATED	coord: 1..131
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig11338	contig	L-elsbetiae_contig11338:4229..5625 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig11338.1179.1	mRNA_L-elsbetiae_contig11338.1179.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig11338 4229..5625 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig11338.1179.1 ID=prot_L-elsbetiae_contig11338.1179.1|Name=mRNA_L-elsbetiae_contig11338.1179.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
KVLRACERALLWDEAVYLYKEDGQYDSGVKTMIDHCVCFNHELFLDCVQK
VRNQEVNYKAISFYLEQHPLKLVRLLQVLTPNLDHSRVVHQLRRAENLPL
AIDYLKSVQKENVAAVNEALSELYIEDEDHE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR000547	Clathrin_H-chain/VPS_repeat
IPR016024	ARM-type_fold