prot_L-elsbetiae_contig11332.1178.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11332.1178.1
Unique Nameprot_L-elsbetiae_contig11332.1178.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig11332.1178.1 vs. uniprot
Match: D7G1K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K5_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 1.300e-73
Identity = 113/134 (84.33%), Postives = 120/134 (89.55%), Query Frame = 0 
Query:    3 QISSLSVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGQGGVGFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEISGGARTRTVGFFAGGVSNTGDSSMVDMFDFDERRVLPRMYAPTVRGPTQGLSLS 136
            ++++L VPRLPNPPRFEMTSCCFKHQCVFAGGRVSMG+GG GFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEIS G   RTVG FAGGVSNTGDSSMVD+FDFDERRVLPRM APTVR   +G   S
Sbjct:  252 KVATLPVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGEGGAGFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEISTGPEKRTVGMFAGGVSNTGDSSMVDLFDFDERRVLPRMDAPTVRANARGFLFS 385
[Close]
BLAST of mRNA_L-elsbetiae_contig11332.1178.1 vs. uniprot
Match: A0A6H5KCH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH0_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 9.120e-70
Identity = 115/146 (78.77%), Postives = 125/146 (85.62%), Query Frame = 0 
Query:    3 QISSLSVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGQGGVGFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEISGGARTRTVGFFAGGVSNTGDSSMVDMFDFDERRVLPRMYAPTVRGPT----QGLSLSREVAAFVG 144
            ++++L VPRLPNPPRFEMTSCCFKHQCVFAGGRVSMG+GG GFNSDRAEVWDG+TWSFATWGEHTLSEPRHLMGSAVIEIS G+  RTVG F GGVSNTGDSSMVD+FDFDERRVLPRM APTV         G S + E +AFVG
Sbjct:  177 KVATLPVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGEGGAGFNSDRAEVWDGSTWSFATWGEHTLSEPRHLMGSAVIEISTGSEKRTVGMFTGGVSNTGDSSMVDLFDFDERRVLPRMDAPTVSASPGFQPSGGSGAEEASAFVG 322
[Close]
BLAST of mRNA_L-elsbetiae_contig11332.1178.1 vs. uniprot
Match: A0A835ZD19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD19_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.840e-47
Identity = 91/201 (45.27%), Postives = 129/201 (64.18%), Query Frame = 0 
Query:    4 ISSLSVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGQGGVGFNSDRAEVWDGATWSFATWGEHTLSEPRHLMGSAVIEIS-GGARTRTVGFFAGGVSNTGDSSMVDMFDFDERRVLPRMYAPTVRGPTQGLSLSREVAAFVGATGKIDVFDGRTLCWLSYEAEGFLPGTGVVGRSAKWFFD-----GASPGFQPSGGGSAE 198
            +++L V RLP P RF+M+SCCFKH CVFAGG+V++     G+ SDR +VW+G  W + +  +HTLSE R  MG+A +E++        VGFFAGGV   G+  +VD++DF   R LPR+Y PTVRG   G++L  + A F+  TG++DVF+  +LCW SY+ +G   G    GR+ +W+FD     G   G+  SGGG+ E
Sbjct:  224 VTNLPVQRLPQP-RFDMSSCCFKHICVFAGGQVNLD----GYFSDRVDVWNGERWGWTS--DHTLSEARFGMGTASLEMALADGVVHMVGFFAGGVGRAGNLFLVDLYDFASDRWLPRIYLPTVRGKCSGVTLGIDAAMFIADTGEVDVFNSTSLCWTSYKLDGIALGAVAAGRAPQWYFDPDATAGGGSGYYRSGGGAPE 417
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11332.1178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1K5_ECTSI1.300e-7384.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCH0_9PHAE9.120e-7078.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD19_9STRA1.840e-4745.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 11..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11332contigL-elsbetiae_contig11332:1522..5985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11332.1178.1mRNA_L-elsbetiae_contig11332.1178.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11332 1522..5985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11332.1178.1 ID=prot_L-elsbetiae_contig11332.1178.1|Name=mRNA_L-elsbetiae_contig11332.1178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
QPQISSLSVPRLPNPPRFEMTSCCFKHQCVFAGGRVSMGQGGVGFNSDRA
EVWDGATWSFATWGEHTLSEPRHLMGSAVIEISGGARTRTVGFFAGGVSN
TGDSSMVDMFDFDERRVLPRMYAPTVRGPTQGLSLSREVAAFVGATGKID
VFDGRTLCWLSYEAEGFLPGTGVVGRSAKWFFDGASPGFQPSGGGSAEEE
ASAFV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller