prot_L-elsbetiae_contig11286.1142.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11286.1142.1
Unique Nameprot_L-elsbetiae_contig11286.1142.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length184
Homology
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BLAST of mRNA_L-elsbetiae_contig11286.1142.1 vs. uniprot
Match: D8LEN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN7_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.910e-42
Identity = 104/149 (69.80%), Postives = 119/149 (79.87%), Query Frame = 0 
Query:    1 AALREEVERLTGRAKEAETAVQKLAQKQELVNQLRRKLRARDEDLKSFRERVEDLAETKTLLSAELEAANQRLTSSDREGRAS--SRPRAATAAAHAVRELEGANRTVATLRQQVQHQSEIIDRLREDDARDRSTRDRNDGVESAAAAA 147
            AALREEV++LT RAK+A++AVQKLAQKQELVNQLRR L+ RD  +K+F+ER EDLAETKTLLSAELEAANQRL +SDR+ R+S  SRP AA AAAH  RELE A R  ATLRQQVQHQSE++DRLR D  RDR         E+AAAAA
Sbjct:  588 AALREEVDKLTARAKDADSAVQKLAQKQELVNQLRRTLKVRDATIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPAAAAAAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDRE--------ETAAAAA 728
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BLAST of mRNA_L-elsbetiae_contig11286.1142.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 4.040e-36
Identity = 90/134 (67.16%), Postives = 105/134 (78.36%), Query Frame = 0 
Query:    1 AALREEVERLTGRAKEAETAVQKLAQKQELVNQLRRKLRARDEDLKSFRERVEDLAETKTLLSAELEAANQRLTSSDREGRASSRPRAATAA---AHAVRELEGANRTVATLRQQVQHQSEIIDRLREDDARDR 131
            A LREEV+RLT RAK+A++AVQKLAQKQ+LVNQLRR L+ RD  +K+F++R EDLAE KTLLSAELEAANQRL +SDR+ R+S R R        AH  RELE A R  ATLRQQVQHQSE++DRLR D  RDR
Sbjct: 2294 AELREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDATIKTFQDRAEDLAEAKTLLSAELEAANQRLVASDRDSRSSCRSRPXXXXXXXAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDR 2427
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11286.1142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEN7_ECTSI2.910e-4269.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTB3_9PHAE4.040e-3667.16Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..72
NoneNo IPR availableCOILSCoilCoilcoord: 92..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11286contigL-elsbetiae_contig11286:4382..5882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11286.1142.1mRNA_L-elsbetiae_contig11286.1142.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11286 4382..5882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11286.1142.1 ID=prot_L-elsbetiae_contig11286.1142.1|Name=mRNA_L-elsbetiae_contig11286.1142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp
AALREEVERLTGRAKEAETAVQKLAQKQELVNQLRRKLRARDEDLKSFRE
RVEDLAETKTLLSAELEAANQRLTSSDREGRASSRPRAATAAAHAVRELE
GANRTVATLRQQVQHQSEIIDRLREDDARDRSTRDRNDGVESAAAAAAKP
QLRWRRTKPTTSEIASLRPNVSCSGWRGAVRCPR
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