prot_L-elsbetiae_contig10879.802.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10879.802.1
Unique Nameprot_L-elsbetiae_contig10879.802.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length513
Homology
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BLAST of mRNA_L-elsbetiae_contig10879.802.1 vs. uniprot
Match: A0A6H5KRZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ3_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.180e-98
Identity = 280/542 (51.66%), Postives = 328/542 (60.52%), Query Frame = 0 
Query:    1 EGIRKEETCFD------RGEWSSKLCHLPTELSSLPFHSMELPSSPXXXXXXXXXLP--------------LQRRTRSPSLPSSGDTNVLVARKPAPGGGVEPGEHEGGLREKIGGAVAALGAAGRGLGGGRGGARA-RTVTDEGMTLRFELDNVGLPSGHWEWVGGWMVDSETEVSADQDGWVYGRAAEDISEIALGQRSSSRRSIGDSGNGSGGSVADGESARNSLEAA-----GAPPPQACEAVXXXXXXXXXXXXXXXXXXXXXXXXSQLRSGPTSPAPSAXXXKDQAQEEAXXXXXXXXXXXXXXXXXXGL--W-LRRRRLARLRMIRKVDGARESTTSVLEMMRRLCSLEVLVRKLSSQVVAQQRQVTGLENQVAYLAPLHPKLKKACALGRKDRQRGNALQGRLVEAENEIKVLRRCLSAANATRSPPXXXXXXXXXXXXITNAATTTPGRQQQQQPKATGLLSAQELDEAGETSESEGAREGKKEGGYEEERGAEYFAGXXXXXXXXGKVGAEAWGWVEGVAQRAAGTFARRPR 513
            EGIRKEE+CF+      RG WSS+L   PTELSSLP H +  P  P  XXXXXXXL                  R+RSP+L  +G      AR  A GG        GGLREKIGGA+AA+ AAGRGLGGG GGA   R VTDEG+T RFELD+VGLPS HWEWVGGWMVDSETE S+DQDGW+YGR+  +ISEIALG+ SS   S G   + S   ++   SA ++   A     GA  P+A               XXXXXXXXXXXXX    SG  S    A    ++ +E+A    XXXXXXXXXXXXXX    W LRRRRL RLRM+R VDGAR+ST SVLEM RRL S+E+LVRKLS QVV QQRQ+T LE+QVA+LAPL PKL+ ACALGRKDR RG+ALQG+L+EAENE+KVLRRC+   + T +               T+     P       P    + S + +  A E  +   AR    +G  +           XXXXXXX    A AWGWVEGVAQRAAGT  RR R
Sbjct:  350 EGIRKEESCFEWQGKDSRGAWSSRLGAFPTELSSLPLHHLAGPHPPPQXXXXXXXLSSLPQSXXXXXXXXXXXXRSRSPTLALTGFVTADHARCEA-GGQAGSDARAGGLREKIGGAMAAVAAAGRGLGGGIGGAPGWRMVTDEGVTFRFELDDVGLPSHHWEWVGGWMVDSETEASSDQDGWIYGRSPSEISEIALGRTSS--HSNGMRSSSSSPEISSSRSAADATAGAAGVGDGAREPEASSE----NTQDGDESXXXXXXXXXXXXXXXXXSGNYSDGDIASSADNKGEEDAKGPRXXXXXXXXXXXXXXXXXXWGLRRRRLVRLRMVRMVDGARDSTISVLEMFRRLSSMEILVRKLSRQVVTQQRQMTALESQVAFLAPLQPKLRMACALGRKDRMRGDALQGKLIEAENELKVLRRCMETTSGTGTGTGPRGPAAPPLAPATSRRAAAPA------PLRAAVPSGRNVKGATEDDDGVSARRAGGDGXVD-----------XXXXXXXXXXXAAAWGWVEGVAQRAAGTLVRRGR 867
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10879.802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRZ3_9PHAE1.180e-9851.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 382..402
NoneNo IPR availableCOILSCoilCoilcoord: 330..350
NoneNo IPR availableCOILSCoilCoilcoord: 256..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10879contigL-elsbetiae_contig10879:1661..6636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10879.802.1mRNA_L-elsbetiae_contig10879.802.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10879 1661..6636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10879.802.1 ID=prot_L-elsbetiae_contig10879.802.1|Name=mRNA_L-elsbetiae_contig10879.802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=513bp
EGIRKEETCFDRGEWSSKLCHLPTELSSLPFHSMELPSSPSPPPSPPSPL
PLQRRTRSPSLPSSGDTNVLVARKPAPGGGVEPGEHEGGLREKIGGAVAA
LGAAGRGLGGGRGGARARTVTDEGMTLRFELDNVGLPSGHWEWVGGWMVD
SETEVSADQDGWVYGRAAEDISEIALGQRSSSRRSIGDSGNGSGGSVADG
ESARNSLEAAGAPPPQACEAVVKSPSSPSSPPPPPQQQQRQQDSSSQLRS
GPTSPAPSAEQQKDQAQEEAAAAAEAEASPGRGGGGEGGLWLRRRRLARL
RMIRKVDGARESTTSVLEMMRRLCSLEVLVRKLSSQVVAQQRQVTGLENQ
VAYLAPLHPKLKKACALGRKDRQRGNALQGRLVEAENEIKVLRRCLSAAN
ATRSPPPPRPRPRPRPTPITNAATTTPGRQQQQQPKATGLLSAQELDEAG
ETSESEGAREGKKEGGYEEERGAEYFAGGGDVGGGGGKVGAEAWGWVEGV
AQRAAGTFARRPR
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