prot_L-elsbetiae_contig10863.792.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10863.792.1
Unique Name	prot_L-elsbetiae_contig10863.792.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	115

Homology

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: D8LC92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC92_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.030e-69
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 114
            MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGY GTQMVLDPTKEEEK+GAGVMT+ALMPGSQQVTQWWQEGRFDGQK+AEALELCTDGCGCVHKMMEAKLKA + K+
Sbjct:  157 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A7S2UZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ52_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.550e-32
Identity = 67/126 (53.17%), Postives = 84/126 (66.67%), Query Frame = 0

Query:    2 VLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFG-TQMVLDPTK---------EEEKNG----------AGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKL 107
            VLQADGGEL  A TCAS+AL+DAGIEL+DLV  CSVG  G ++++LDPT+         E+  +G          AGVMTV   P SQ+VTQWWQEG+FD + +A  L LC DGC  +HK+M+ KL
Sbjct:  150 VLQADGGELGAAVTCASLALSDAGIELFDLVVGCSVGCLGGSRVLLDPTEVEISQQRAPEDSSSGGARGGKQGAKAGVMTVTFTPASQEVTQWWQEGQFDQESMARGLALCIDGCLVMHKIMKEKL 275

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A835ZHR0_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 8.400e-28
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 0

Query:    2 VLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKA 109
            VL ADGG L  A TCAS+ALA+A IEL+DLV AC+      Q++LDPT +EE    G + VA+MP S++VTQW Q GR    + A A+ELC DGC  V  MM A+L A
Sbjct:  145 VLAADGGVLGAAITCASLALANASIELFDLVAACTAACADGQVLLDPTAQEEAAAGGSVLVAVMPSSREVTQWRQRGRLPSAQAAAAVELCMDGCAGVATMMRARLLA 252

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: L8HCU8_ACACA (3' exoribonuclease family, domain 1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCU8_ACACA)

HSP 1 Score: 104 bits (259), Expect = 5.740e-25
Identity = 51/114 (44.74%), Postives = 74/114 (64.91%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 114
            +VL+  GG +  A T AS+ALADAGIE+YDLV +CSVG   + ++LDP+  EEK     + VA+MP + ++TQ  Q G  +  K  EA+ELC DGC  +++MM   L   +A++
Sbjct:  149 LVLEESGGMVGAAITAASLALADAGIEMYDLVASCSVGVVDSHILLDPSIAEEKAAQSNLMVAIMPSANEITQMLQTGEIEHTKAPEAIELCLDGCSKIYQMMRQNLLETAAQK 262

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A2I0AH60_9ASPA (Exosome complex exonuclease RRP46 like n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AH60_9ASPA)

HSP 1 Score: 100 bits (248), Expect = 1.620e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLK 108
            +VL++ GG+L V  +CAS+ALADAGI +YDLV+A S+  FGT +V+DPT EEE    G   ++ MP   ++TQ+   G +   KI EALELC D C  + ++M + LK
Sbjct:  141 LVLESGGGDLPVIISCASLALADAGIMMYDLVSAVSLSCFGTNLVIDPTTEEEACRDGSFMISYMPSRNEITQFTLTGEWSTAKINEALELCLDACSKLAEIMRSCLK 248

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A0D6R5I5_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R5I5_ARACU)

HSP 1 Score: 100 bits (248), Expect = 1.680e-23
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 114
            +VL++ GG+L V  +CAS+ALADAGI ++DLVTA SV   G  +++DPT EEE    G + VA MP   ++TQ    G +   K++EALELC D C  +  +M A LK  + ++
Sbjct:  141 LVLESGGGDLPVIISCASLALADAGIMMFDLVTAVSVSSIGRNLIIDPTSEEENCQDGGLMVACMPSRNEITQLTITGEWSSTKVSEALELCLDACSKLADIMRACLKEAAVEQ 254

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A804I677_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804I677_MUSAM)

HSP 1 Score: 99.8 bits (247), Expect = 2.370e-23
Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSA 112
            +VL++ GG+L V  TCAS+ALADAGI +YDLV + SV  FG  +V+DPT EEE    G + +  MP   +VTQ    G +   KI EA+ELC D C  + ++M + LK  ++
Sbjct:  141 LVLESGGGDLPVIVTCASLALADAGIMMYDLVASVSVSCFGRNLVIDPTSEEEACQDGTLMITCMPARNEVTQLMLTGEWTTAKINEAMELCLDACSKLAEIMRSCLKEAAS 252

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A427AC79_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427AC79_ENSVE)

HSP 1 Score: 97.4 bits (241), Expect = 2.790e-23
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSA 112
            +VL++ GG+L V  TCAS+ALADAGI +YDLV + SV  FG  +V+DPT EEE    G + +  MP   +VTQ    G +   KI EA+ELC D C  + +++ + LK  ++
Sbjct:   59 LVLESGGGDLPVIITCASLALADAGIMMYDLVASVSVSCFGRNLVIDPTSEEEACQDGTLMITCMPARNEVTQLTLTGEWTTAKINEAMELCLDACSKLAEVVRSCLKEAAS 170

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A8J5KQ16_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KQ16_ZINOF)

HSP 1 Score: 99.4 bits (246), Expect = 3.130e-23
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 0

Query:    1 MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSA 112
            +VL++ GG+L V  TCAS+ALADAGI +YDLV+A SV  FG  +V+DPT EEE    G + V  MP   +VTQ    G +   KI EA+ELC D C  + ++M + LK  ++
Sbjct:  138 LVLESGGGDLPVIITCASLALADAGIMMYDLVSAVSVSCFGKNLVIDPTLEEEACQDGSLMVTCMPARNEVTQLTLTGEWTTPKINEAMELCLDACSKLAEIMRSCLKEAAS 249

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BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A507EGV0_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGV0_9FUNG)

HSP 1 Score: 98.6 bits (244), Expect = 6.450e-23
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    2 VLQADGGE--LAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKA 109
            +L++DG    LA A TCAS+ALADAGIE+ D V AC+ GYFG+ + LDPT+EEE    G + ++ MP   +VT   Q G        +ALELC D C  +H +M+  L A
Sbjct:  143 ILESDGSAACLAAAITCASLALADAGIEMVDAVAACAAGYFGSTICLDPTEEEEGYEGGSLVLSYMPSLNEVTHVIQSGETSTATTVKALELCVDACSQIHTVMQQSLAA 252

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LC92_ECTSI	1.030e-69	92.98	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2UZ52_9STRA	1.550e-32	53.17	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835ZHR0_9STRA	8.400e-28	53.70	Ribosomal protein S5 domain 2-type protein n=1 Tax...	[more]
L8HCU8_ACACA	5.740e-25	44.74	3' exoribonuclease family, domain 1 domain contain...	[more]
A0A2I0AH60_9ASPA	1.620e-23	47.22	Exosome complex exonuclease RRP46 like n=1 Tax=Apo...	[more]
A0A0D6R5I5_ARACU	1.680e-23	44.74	Uncharacterized protein n=2 Tax=Araucariaceae TaxI...	[more]
A0A804I677_MUSAM	2.370e-23	45.54	(wild Malaysian banana) hypothetical protein n=2 T...	[more]
A0A427AC79_ENSVE	2.790e-23	44.64	Uncharacterized protein n=1 Tax=Ensete ventricosum...	[more]
A0A8J5KQ16_ZINOF	3.130e-23	47.32	Uncharacterized protein n=2 Tax=Zingiber officinal...	[more]
A0A507EGV0_9FUNG	6.450e-23	46.36	Uncharacterized protein n=1 Tax=Powellomyces hirtu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 1..114 e-value: 1.6E-32 score: 114.9
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 30..93 e-value: 2.6E-12 score: 46.6
None	No IPR available	PANTHER	PTHR11953:SF2	EXOSOME COMPLEX COMPONENT MTR3	coord: 1..107
None	No IPR available	PANTHER	PTHR11953	EXOSOME COMPLEX COMPONENT	coord: 1..107
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 1..39
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 28..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10863	contig	L-elsbetiae_contig10863:4511..5610 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10863.792.1	mRNA_L-elsbetiae_contig10863.792.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10863 4511..5619 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10863.792.1 ID=prot_L-elsbetiae_contig10863.792.1|Name=mRNA_L-elsbetiae_contig10863.792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTK
EEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVH
KMMEAKLKAVSAKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027408	PNPase/RNase_PH_dom_sf
IPR015847	ExoRNase_PH_dom2
IPR020568	Ribosomal_S5_D2-typ_fold
IPR036345	ExoRNase_PH_dom2_sf