prot_L-elsbetiae_contig10859.787.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10859.787.1
Unique Nameprot_L-elsbetiae_contig10859.787.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length283
Homology
BLAST of mRNA_L-elsbetiae_contig10859.787.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.820e-47
Identity = 92/155 (59.35%), Postives = 107/155 (69.03%), Query Frame = 0
Query:    4 HVGGHILKDKVLQVSTVCGFCGGSGCRTTIKDPAGRAAPVMHSSCVYAPWNDARHETVAVKLKSARAGSRSSPCTNIVVKCIFCSQETYIWKYGMADHVTRCHNQETLVEDGTESAKKFKHDYTVSGSEKNAVLQKFKGGRPRNRREDDTLPPVV 158
            HVGG    +K   VSTVCGFCGG GCR+TI DP G A P++HS+C  AP +DAR E VA+ L SARA S +SPCTN+V+KC  CSQ+ YIW YGM DHVTRCH    LV  GT  A KFK   T+S SEK  VL K K GRPR R + +TLPP +
Sbjct: 1076 HVGGDP-GNKTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGT-GADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLPPPL 1228          
BLAST of mRNA_L-elsbetiae_contig10859.787.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.120e-40
Identity = 79/128 (61.72%), Postives = 92/128 (71.88%), Query Frame = 0
Query:    6 GGHILKDKVLQVSTVCGFCGGSGCRTTIKDPAGRAAPVMHSSCVYAPWNDARHETVAVKLKSARAGSRSSPCTNIVVKCIFCSQETYIWKYGMADHVTRCHNQETLVEDGTESAKKFKHDYTVSGSEK 133
            GGHILKDKV   ST CGFCGG G  TTI DP G+A P++HS+C  AP +DAR E VA+ L SARAGS +S CTN+V KC FCSQ  YIWKY M+DH+TRCH  + LV +GT  A  FK   T+S SEK
Sbjct:  403 GGHILKDKV---STACGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGT-GADNFKETCTISESEK 526          
BLAST of mRNA_L-elsbetiae_contig10859.787.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 5.100e-24
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   80 IVVKCIFCSQETYIWKYGMADHVTRCHNQETLVEDGTESAKKFKHDYTVSGSEKNAVLQKFKGGRPRNRRE-DDTLPPVVRRIVSGNGVPGRGVPGARPSESKEKE 184
            +V+KC+FCSQ+TYIWKYGM++HVTRCH ++ LV  GT +  +FK  YT+S SEK  VLQKFK GRPR R + ++ LP        GNG  GR + G R  E   +E
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGT-TVDRFKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGNGTFGRNMSGTRSLEDMGEE 105          
BLAST of mRNA_L-elsbetiae_contig10859.787.1 vs. uniprot
Match: A0A6H5K5R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R3_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.680e-19
Identity = 50/107 (46.73%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   80 IVVKCIFCSQETYIWKYGMADHVTRCHNQETLVEDGTESAKKFKHDYTVSGSEKNAVLQKFKGGRPRNRRE-DDTLPPVVRRIVSGNGVPGRGVPGARPSESKEKED 185
            +V+KC  CSQ  YIWKYGM++HVTR H ++  V  GT    KFK  Y++S SEK   L KFK G+PR R + ++ LPP       GNG  GR + G R  E   +ED
Sbjct:    1 MVLKCFVCSQNNYIWKYGMSEHVTRRHQEDMRVAAGT-GVDKFKEAYSISESEKAKALHKFKAGKPRQRGQGNEVLPPGALGRTEGNGASGRNMAGTRSLEDMGEED 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10859.787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K6M3_9PHAE2.820e-4759.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L2E6_9PHAE1.120e-4061.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNW9_ECTSI5.100e-2451.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5R3_9PHAE1.680e-1946.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..237
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10859contigL-elsbetiae_contig10859:4326..5485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10859.787.1mRNA_L-elsbetiae_contig10859.787.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10859 3718..5485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10859.787.1 ID=prot_L-elsbetiae_contig10859.787.1|Name=mRNA_L-elsbetiae_contig10859.787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp
MRMHVGGHILKDKVLQVSTVCGFCGGSGCRTTIKDPAGRAAPVMHSSCVY
APWNDARHETVAVKLKSARAGSRSSPCTNIVVKCIFCSQETYIWKYGMAD
HVTRCHNQETLVEDGTESAKKFKHDYTVSGSEKNAVLQKFKGGRPRNRRE
DDTLPPVVRRIVSGNGVPGRGVPGARPSESKEKEDDGEEQDDEKDEEEDG
EQEEEDEEQEEEEEEEEEEEEEEEDDQNDREDENEDEQPGGRGAGGNKRR
RAESSNGSSETPRENVGEPMRKSSRGRTIQTNV
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