prot_L-elsbetiae_contig10794.738.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10794.738.1
Unique Name	prot_L-elsbetiae_contig10794.738.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	130

Homology

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BLAST of mRNA_L-elsbetiae_contig10794.738.1 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 5.770e-47
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 0

Query:    1 MLQVLRPRLSARGHAVLCHSKRVGSGCARR-GRRRLSTTSEPSKPAGSPSADEEPGWPLKYKLAGGAALGTIIPWMFSYAVANDPGSRRLIERLSPEL-----------VQWFRNREQGGHFFDEDPKRVAYVAQAPEWIDQ 130
            ML+VL+PRL   G A L   K V  GC R+ G RRLSTT+EP+KP+ SP+A EEPGWPLKYK+AGGA LGTIIP++FSYA+ANDPGSRRL+ +LSP +           VQWFR R++GGHFFDEDPKR+ Y+A  P+WI++
Sbjct:    1 MLRVLQPRLPTHGRAPLRRPK-VIEGCIRQHGHRRLSTTAEPAKPS-SPAA-EEPGWPLKYKVAGGAILGTIIPYIFSYAMANDPGSRRLVSKLSPGIATTLPGGGRLGVQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINE 139

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10794.738.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10794.738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LT04_ECTSI	5.770e-47	61.27	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..61
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 82..130
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10794	contig	L-elsbetiae_contig10794:201..1831 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10794.738.1	mRNA_L-elsbetiae_contig10794.738.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10794 201..1860 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10794.738.1 ID=prot_L-elsbetiae_contig10794.738.1|Name=mRNA_L-elsbetiae_contig10794.738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
MLQVLRPRLSARGHAVLCHSKRVGSGCARRGRRRLSTTSEPSKPAGSPSA
DEEPGWPLKYKLAGGAALGTIIPWMFSYAVANDPGSRRLIERLSPELVQW
FRNREQGGHFFDEDPKRVAYVAQAPEWIDQ