prot_L-elsbetiae_contig10769.715.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10769.715.1
Unique Name	prot_L-elsbetiae_contig10769.715.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	129

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: K0CVW3_ALTMS (Endoribonuclease L-PSP family protein n=43 Tax=Alteromonadaceae TaxID=72275 RepID=K0CVW3_ALTMS)

HSP 1 Score: 235 bits (599), Expect = 5.110e-78
Identity = 121/128 (94.53%), Postives = 125/128 (97.66%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVS+DF  QAVQVFEN+KAVC+AAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYF KPYPARAAVQV+ALPKGAQIEIDGVMELPE
Sbjct:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSDDFEAQAVQVFENIKAVCEAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFTKPYPARAAVQVTALPKGAQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: UPI001C48A733 (RidA family protein n=1 Tax=Alteromonas antoniana TaxID=2803813 RepID=UPI001C48A733)

HSP 1 Score: 224 bits (572), Expect = 6.690e-74
Identity = 113/128 (88.28%), Postives = 121/128 (94.53%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            MSKS+IQTD+AP AIGTYSQA+KAGTTVYLSGQIPLV +TMEMVSEDFAEQA QVF N+KAVC+AAGGTTNDLVKVNI+L DL HF TVNEIMS+YFNKPYPARAAVQVSALPKGAQIEIDGVMELPE
Sbjct:    1 MSKSVIQTDRAPEAIGTYSQAIKAGTTVYLSGQIPLVPDTMEMVSEDFAEQATQVFNNVKAVCEAAGGTTNDLVKVNIYLTDLSHFTTVNEIMSQYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A3D8M6Z9_9ALTE (RidA family protein n=1 Tax=Alteromonas aestuariivivens TaxID=1938339 RepID=A0A3D8M6Z9_9ALTE)

HSP 1 Score: 222 bits (566), Expect = 5.500e-73
Identity = 111/128 (86.72%), Postives = 121/128 (94.53%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            MSK+IIQTD+AP AIGTYSQAVKAGTTVYLSGQIPLV ETMEMVSE+FAEQA QVFEN+KAVC+AAGGTTND+VKVNIFL+DL HFATVNEIMS+YFNKPYPARAA+ V  LPKGAQIEIDG+MELPE
Sbjct:    1 MSKAIIQTDRAPQAIGTYSQAVKAGTTVYLSGQIPLVPETMEMVSENFAEQATQVFENIKAVCEAAGGTTNDMVKVNIFLLDLAHFATVNEIMSKYFNKPYPARAAIGVKELPKGAQIEIDGIMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A7Y6ZXW4_9ALTE (RidA family protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A7Y6ZXW4_9ALTE)

HSP 1 Score: 218 bits (556), Expect = 1.840e-71
Identity = 109/128 (85.16%), Postives = 120/128 (93.75%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            M+KSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLV ETME+VS+DFAEQA QVFENL AVC+AAGG  NDLVKVNI+L+DLGHFATVNEIM++YF+KPYPARAA+ +  LPKGAQIEIDGVMELPE
Sbjct:    1 MAKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVPETMELVSQDFAEQATQVFENLSAVCEAAGGKVNDLVKVNIYLLDLGHFATVNEIMAKYFSKPYPARAAIGIKELPKGAQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A4V2I6D1_9ALTE (RidA family protein n=1 Tax=Alteromonas sp. KUL49 TaxID=2480798 RepID=A0A4V2I6D1_9ALTE)

HSP 1 Score: 217 bits (553), Expect = 5.280e-71
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            MSKSII TDKAPAAIGTYSQA KAGTTVYLSGQIPLV ETMEMVS+ FAEQAVQVFEN+KAVC+AAGG+T+ LVKVNIFL DL HFATVNEIMS+YF++PYPARAAVQV+ALPKGAQIEIDGVMELPE
Sbjct:    1 MSKSIIHTDKAPAAIGTYSQAAKAGTTVYLSGQIPLVPETMEMVSDVFAEQAVQVFENIKAVCEAAGGSTDHLVKVNIFLTDLSHFATVNEIMSQYFSQPYPARAAVQVAALPKGAQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: UPI001C0A62E9 (RidA family protein n=1 Tax=Alteromonas sp. C1M14 TaxID=2841567 RepID=UPI001C0A62E9)

HSP 1 Score: 217 bits (553), Expect = 5.280e-71
Identity = 110/128 (85.94%), Postives = 120/128 (93.75%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            M+KSIIQTD AP AIGTYSQAVKAGTTVYLSGQIPL  +TMEMVSEDFAEQA QVFEN+KAVC+AAGGT NDLVKVNIFL+DL HFATVNEIMS+YF+KPYPARAA+ V+ALPKG+QIEIDGVMELPE
Sbjct:    1 MAKSIIQTDNAPQAIGTYSQAVKAGTTVYLSGQIPLNPQTMEMVSEDFAEQATQVFENVKAVCEAAGGTMNDLVKVNIFLLDLSHFATVNEIMSKYFSKPYPARAAIGVAALPKGSQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A1E8FHV6_9ALTE (Reactive intermediate/imine deaminase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1E8FHV6_9ALTE)

HSP 1 Score: 217 bits (552), Expect = 7.500e-71
Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            M+KSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLV  TME+VS+DFAEQA QVFEN+KAVC+AAGGT NDLVKVNI+L+DL HFATVNEIMS+YF KPYPARAA+ +  LPKGAQIEIDGVMELPE
Sbjct:    1 MAKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVPATMELVSQDFAEQATQVFENIKAVCEAAGGTPNDLVKVNIYLLDLAHFATVNEIMSKYFAKPYPARAAIGIKELPKGAQIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A2E2CCB9_9ALTE (RidA family protein n=9 Tax=Alteromonadaceae TaxID=72275 RepID=A0A2E2CCB9_9ALTE)

HSP 1 Score: 215 bits (548), Expect = 3.050e-70
Identity = 108/128 (84.38%), Postives = 120/128 (93.75%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            MSKSIIQTD APAAIGTYSQAVKAGTTVYLSGQIPLV ETM++VS+DFAEQA QVFEN+KAVC+AAGGTTNDLVKVNI+L+DLG+FATVNEIM++YF KPYPARAA+ + ALPK A IEIDGVMELPE
Sbjct:    1 MSKSIIQTDNAPAAIGTYSQAVKAGTTVYLSGQIPLVPETMQLVSDDFAEQATQVFENIKAVCEAAGGTTNDLVKVNIYLLDLGNFATVNEIMAKYFTKPYPARAAIGIKALPKDALIEIDGVMELPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: G4QF24_GLANF (Endoribonuclease L-PSP family protein n=3 Tax=Glaciecola TaxID=89404 RepID=G4QF24_GLANF)

HSP 1 Score: 215 bits (547), Expect = 4.340e-70
Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            M KSIIQTD+APAAIGTYSQAVKAGTTVYLSGQIPLV  TMEM+S+DFAEQAVQVFENLKAVC AAGG T+ LVKVNIFLIDLGHFATVNEIM+RYF +PYPARAA+ VS LPKGAQIEIDGVM LPE
Sbjct:    1 MPKSIIQTDEAPAAIGTYSQAVKAGTTVYLSGQIPLVPSTMEMISDDFAEQAVQVFENLKAVCTAAGGDTSHLVKVNIFLIDLGHFATVNEIMARYFKQPYPARAAIGVSQLPKGAQIEIDGVMVLPE 128

[Close]

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A1E7ZA08_9ALTE (Reactive intermediate/imine deaminase n=4 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1E7ZA08_9ALTE)

HSP 1 Score: 211 bits (538), Expect = 1.020e-68
Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 0

Query:    1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
            M+KSII TD AP AIGTYSQAVKAGTTVYLSGQIPLV ETME++S+DFAEQA QVFEN+KAVC+AAGGT ND+VKVNIFL DL HFATVNEIM++YFNKPYPARAA+ V  LPKG+QIEIDG+MELPE
Sbjct:    1 MAKSIIHTDNAPQAIGTYSQAVKAGTTVYLSGQIPLVPETMEIISDDFAEQATQVFENVKAVCEAAGGTINDMVKVNIFLPDLSHFATVNEIMAKYFNKPYPARAAIGVKELPKGSQIEIDGIMELPE 128

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
K0CVW3_ALTMS	5.110e-78	94.53	Endoribonuclease L-PSP family protein n=43 Tax=Alt...	[more]
UPI001C48A733	6.690e-74	88.28	RidA family protein n=1 Tax=Alteromonas antoniana ...	[more]
A0A3D8M6Z9_9ALTE	5.500e-73	86.72	RidA family protein n=1 Tax=Alteromonas aestuariiv...	[more]
A0A7Y6ZXW4_9ALTE	1.840e-71	85.16	RidA family protein n=1 Tax=Alteromonadaceae bacte...	[more]
A0A4V2I6D1_9ALTE	5.280e-71	87.50	RidA family protein n=1 Tax=Alteromonas sp. KUL49 ...	[more]
UPI001C0A62E9	5.280e-71	85.94	RidA family protein n=1 Tax=Alteromonas sp. C1M14 ...	[more]
A0A1E8FHV6_9ALTE	7.500e-71	85.16	Reactive intermediate/imine deaminase n=2 Tax=Alte...	[more]
A0A2E2CCB9_9ALTE	3.050e-70	84.38	RidA family protein n=9 Tax=Alteromonadaceae TaxID...	[more]
G4QF24_GLANF	4.340e-70	86.72	Endoribonuclease L-PSP family protein n=3 Tax=Glac...	[more]
A0A1E7ZA08_9ALTE	1.020e-68	82.03	Reactive intermediate/imine deaminase n=4 Tax=Alte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..126 e-value: 8.3E-49 score: 166.8
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 1..127
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 3..124 e-value: 9.9E-51 score: 169.1
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 9..124 e-value: 4.0E-41 score: 139.8
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 1..124
None	No IPR available	PANTHER	PTHR11803:SF13		coord: 1..124
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 102..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10769	contig	L-elsbetiae_contig10769:4723..5109 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10769.715.1	mRNA_L-elsbetiae_contig10769.715.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10769 4723..5109 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10769.715.1 ID=prot_L-elsbetiae_contig10769.715.1|Name=mRNA_L-elsbetiae_contig10769.715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAE
QAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKP
YPARAAVQVSALPKGAQIEIDGVMELPE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR006056	RidA
IPR006175	YjgF/YER057c/UK114
IPR019897	RidA_CS