mRNA_L-elsbetiae_contig10769.715.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: K0CVW3_ALTMS (Endoribonuclease L-PSP family protein n=43 Tax=Alteromonadaceae TaxID=72275 RepID=K0CVW3_ALTMS) HSP 1 Score: 235 bits (599), Expect = 5.110e-78 Identity = 121/128 (94.53%), Postives = 125/128 (97.66%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVS+DF QAVQVFEN+KAVC+AAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYF KPYPARAAVQV+ALPKGAQIEIDGVMELPE Sbjct: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSDDFEAQAVQVFENIKAVCEAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFTKPYPARAAVQVTALPKGAQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: UPI001C48A733 (RidA family protein n=1 Tax=Alteromonas antoniana TaxID=2803813 RepID=UPI001C48A733) HSP 1 Score: 224 bits (572), Expect = 6.690e-74 Identity = 113/128 (88.28%), Postives = 121/128 (94.53%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 MSKS+IQTD+AP AIGTYSQA+KAGTTVYLSGQIPLV +TMEMVSEDFAEQA QVF N+KAVC+AAGGTTNDLVKVNI+L DL HF TVNEIMS+YFNKPYPARAAVQVSALPKGAQIEIDGVMELPE Sbjct: 1 MSKSVIQTDRAPEAIGTYSQAIKAGTTVYLSGQIPLVPDTMEMVSEDFAEQATQVFNNVKAVCEAAGGTTNDLVKVNIYLTDLSHFTTVNEIMSQYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A3D8M6Z9_9ALTE (RidA family protein n=1 Tax=Alteromonas aestuariivivens TaxID=1938339 RepID=A0A3D8M6Z9_9ALTE) HSP 1 Score: 222 bits (566), Expect = 5.500e-73 Identity = 111/128 (86.72%), Postives = 121/128 (94.53%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 MSK+IIQTD+AP AIGTYSQAVKAGTTVYLSGQIPLV ETMEMVSE+FAEQA QVFEN+KAVC+AAGGTTND+VKVNIFL+DL HFATVNEIMS+YFNKPYPARAA+ V LPKGAQIEIDG+MELPE Sbjct: 1 MSKAIIQTDRAPQAIGTYSQAVKAGTTVYLSGQIPLVPETMEMVSENFAEQATQVFENIKAVCEAAGGTTNDMVKVNIFLLDLAHFATVNEIMSKYFNKPYPARAAIGVKELPKGAQIEIDGIMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A7Y6ZXW4_9ALTE (RidA family protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A7Y6ZXW4_9ALTE) HSP 1 Score: 218 bits (556), Expect = 1.840e-71 Identity = 109/128 (85.16%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 M+KSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLV ETME+VS+DFAEQA QVFENL AVC+AAGG NDLVKVNI+L+DLGHFATVNEIM++YF+KPYPARAA+ + LPKGAQIEIDGVMELPE Sbjct: 1 MAKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVPETMELVSQDFAEQATQVFENLSAVCEAAGGKVNDLVKVNIYLLDLGHFATVNEIMAKYFSKPYPARAAIGIKELPKGAQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A4V2I6D1_9ALTE (RidA family protein n=1 Tax=Alteromonas sp. KUL49 TaxID=2480798 RepID=A0A4V2I6D1_9ALTE) HSP 1 Score: 217 bits (553), Expect = 5.280e-71 Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 MSKSII TDKAPAAIGTYSQA KAGTTVYLSGQIPLV ETMEMVS+ FAEQAVQVFEN+KAVC+AAGG+T+ LVKVNIFL DL HFATVNEIMS+YF++PYPARAAVQV+ALPKGAQIEIDGVMELPE Sbjct: 1 MSKSIIHTDKAPAAIGTYSQAAKAGTTVYLSGQIPLVPETMEMVSDVFAEQAVQVFENIKAVCEAAGGSTDHLVKVNIFLTDLSHFATVNEIMSQYFSQPYPARAAVQVAALPKGAQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: UPI001C0A62E9 (RidA family protein n=1 Tax=Alteromonas sp. C1M14 TaxID=2841567 RepID=UPI001C0A62E9) HSP 1 Score: 217 bits (553), Expect = 5.280e-71 Identity = 110/128 (85.94%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 M+KSIIQTD AP AIGTYSQAVKAGTTVYLSGQIPL +TMEMVSEDFAEQA QVFEN+KAVC+AAGGT NDLVKVNIFL+DL HFATVNEIMS+YF+KPYPARAA+ V+ALPKG+QIEIDGVMELPE Sbjct: 1 MAKSIIQTDNAPQAIGTYSQAVKAGTTVYLSGQIPLNPQTMEMVSEDFAEQATQVFENVKAVCEAAGGTMNDLVKVNIFLLDLSHFATVNEIMSKYFSKPYPARAAIGVAALPKGSQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A1E8FHV6_9ALTE (Reactive intermediate/imine deaminase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1E8FHV6_9ALTE) HSP 1 Score: 217 bits (552), Expect = 7.500e-71 Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 M+KSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLV TME+VS+DFAEQA QVFEN+KAVC+AAGGT NDLVKVNI+L+DL HFATVNEIMS+YF KPYPARAA+ + LPKGAQIEIDGVMELPE Sbjct: 1 MAKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVPATMELVSQDFAEQATQVFENIKAVCEAAGGTPNDLVKVNIYLLDLAHFATVNEIMSKYFAKPYPARAAIGIKELPKGAQIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A2E2CCB9_9ALTE (RidA family protein n=9 Tax=Alteromonadaceae TaxID=72275 RepID=A0A2E2CCB9_9ALTE) HSP 1 Score: 215 bits (548), Expect = 3.050e-70 Identity = 108/128 (84.38%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 MSKSIIQTD APAAIGTYSQAVKAGTTVYLSGQIPLV ETM++VS+DFAEQA QVFEN+KAVC+AAGGTTNDLVKVNI+L+DLG+FATVNEIM++YF KPYPARAA+ + ALPK A IEIDGVMELPE Sbjct: 1 MSKSIIQTDNAPAAIGTYSQAVKAGTTVYLSGQIPLVPETMQLVSDDFAEQATQVFENIKAVCEAAGGTTNDLVKVNIYLLDLGNFATVNEIMAKYFTKPYPARAAIGIKALPKDALIEIDGVMELPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: G4QF24_GLANF (Endoribonuclease L-PSP family protein n=3 Tax=Glaciecola TaxID=89404 RepID=G4QF24_GLANF) HSP 1 Score: 215 bits (547), Expect = 4.340e-70 Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 M KSIIQTD+APAAIGTYSQAVKAGTTVYLSGQIPLV TMEM+S+DFAEQAVQVFENLKAVC AAGG T+ LVKVNIFLIDLGHFATVNEIM+RYF +PYPARAA+ VS LPKGAQIEIDGVM LPE Sbjct: 1 MPKSIIQTDEAPAAIGTYSQAVKAGTTVYLSGQIPLVPSTMEMISDDFAEQAVQVFENLKAVCTAAGGDTSHLVKVNIFLIDLGHFATVNEIMARYFKQPYPARAAIGVSQLPKGAQIEIDGVMVLPE 128
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Match: A0A1E7ZA08_9ALTE (Reactive intermediate/imine deaminase n=4 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1E7ZA08_9ALTE) HSP 1 Score: 211 bits (538), Expect = 1.020e-68 Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 1 Query: 1 MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEQAVQVFENLKAVCDAAGGTTNDLVKVNIFLIDLGHFATVNEIMSRYFNKPYPARAAVQVSALPKGAQIEIDGVMELPE 384 M+KSII TD AP AIGTYSQAVKAGTTVYLSGQIPLV ETME++S+DFAEQA QVFEN+KAVC+AAGGT ND+VKVNIFL DL HFATVNEIM++YFNKPYPARAA+ V LPKG+QIEIDG+MELPE Sbjct: 1 MAKSIIHTDNAPQAIGTYSQAVKAGTTVYLSGQIPLVPETMEIISDDFAEQATQVFENVKAVCEAAGGTINDMVKVNIFLPDLSHFATVNEIMAKYFNKPYPARAAIGVKELPKGSQIEIDGIMELPE 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10769.715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10769.715.1 >prot_L-elsbetiae_contig10769.715.1 ID=prot_L-elsbetiae_contig10769.715.1|Name=mRNA_L-elsbetiae_contig10769.715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp MSKSIIQTDKAPAAIGTYSQAVKAGTTVYLSGQIPLVAETMEMVSEDFAEback to top mRNA from alignment at L-elsbetiae_contig10769:4723..5109- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10769.715.1 ID=mRNA_L-elsbetiae_contig10769.715.1|Name=mRNA_L-elsbetiae_contig10769.715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=387bp|location=Sequence derived from alignment at L-elsbetiae_contig10769:4723..5109- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10769:4723..5109- >mRNA_L-elsbetiae_contig10769.715.1 ID=mRNA_L-elsbetiae_contig10769.715.1|Name=mRNA_L-elsbetiae_contig10769.715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=774bp|location=Sequence derived from alignment at L-elsbetiae_contig10769:4723..5109- (Laminarionema elsbetiae ELsaHSoW15)back to top |