prot_L-elsbetiae_contig10192.240.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10192.240.1
Unique Nameprot_L-elsbetiae_contig10192.240.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length178
Homology
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BLAST of mRNA_L-elsbetiae_contig10192.240.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 7.550e-10
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0 
Query:   15 EGCNASSCLMCLMQRKPCRLCGHVTSTQRLREAVWSMSRFVERWSL-------------------ASSGL-----PPDARSMRLEVARRWVTLITG 86
            EGCNA  CL+C+M+ +PC +CGH  S  R+RE + S + F+E+WS                    AS+G      PP + ++R EVA RW+++  G
Sbjct:  183 EGCNADRCLLCVMRSRPCDMCGHPVSADRVREHMASTTGFIEKWSKFCLGKNSRRREESVAAVAGASAGPSEVHHPPRSIALRAEVAHRWMSVAAG 278
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10192.240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGK6_9PHAE7.550e-1036.46WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10192contigL-elsbetiae_contig10192:4029..6151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10192.240.1mRNA_L-elsbetiae_contig10192.240.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10192 4027..6151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10192.240.1 ID=prot_L-elsbetiae_contig10192.240.1|Name=mRNA_L-elsbetiae_contig10192.240.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp
CLECVKFTEIPAFCEGCNASSCLMCLMQRKPCRLCGHVTSTQRLREAVWS
MSRFVERWSLASSGLPPDARSMRLEVARRWVTLITGPRTVATPPAGGTTS
GGSGVGGGGGGHGADFSAGRTSPAAPPGAPRQQQQPAAAQPPTTGPRPPP
AAAYKLGQYEGAAGQPGARENRGGTQER
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