mRNA_L-elsbetiae_contig996.18889.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI) HSP 1 Score: 463 bits (1191), Expect = 7.240e-158 Identity = 239/316 (75.63%), Postives = 257/316 (81.33%), Query Frame = 2 Query: 62 RQRRALSVLASVDCCAASEACKLKLAERGY--VKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGRRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDTFL 1003 +QRR SV+ VD A LAERGY VKGL VLD TVA LR RLPLLF GEFDTGVYPDEMHWREGISR DAPREIVNAWKADRTVA+VVLSE L RLAASLAGW SAR+AQDDVVWKPPG GPV +HQDSAYISRQF PRANNSVT+WIALDDCDRE + ++ S SS PSFHGA+A NYRAPAEAAALSLGRRVEF+AVAV PG CVVHAQDCWHGSAPN+SA+RHRRALVVHF+RGDARFIDGHS+Q TGGP+YIYSRYK LDS LPEEAFP+TFS+DGYRT WIDTFL Sbjct: 11 QQRRTFSVV--VD-----GAASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREGSAADSST---------------SRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP) HSP 1 Score: 251 bits (641), Expect = 5.740e-75 Identity = 134/290 (46.21%), Postives = 171/290 (58.97%), Query Frame = 2 Query: 113 SEACKLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR---RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDG 973 S+ K +G+++ VL+ V RAR+ LF GEFDTG+YPDE HWR+GIS A REI N WK+DR +A++VL E GR A L GW SAR+AQD V+WKP G G V++HQDS YISRQF P +NS+T W ALDD D E G IEYA+ + +P P FHG +Y+ P AA S G+ +VE + VP G VVH Q+ WHGS N S +R RRAL +H +RGD +F++ P YIY RYK D+ L + FP + DG Sbjct: 56 SDEAKRSFWSKGFLQLGQVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYAAGSHEWQPRRELEP--------QFHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL) HSP 1 Score: 249 bits (636), Expect = 5.840e-73 Identity = 135/272 (49.63%), Postives = 172/272 (63.24%), Query Frame = 2 Query: 194 LRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGS-ARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG---RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDT 997 +R R LF G+F+TGVYPDE HWREG+S A REIVN WK DR VA++ LSE LG LA+ L GW AR+AQDDV+WKPPG + +HQDSAYIS QF+P NNSVT+WIALD+ E G +EYA + R + +E S SFH + ++RA AAA ++G V+F+ +VP GGC++H D WHGS PN S + HRRAL VH +R D +F +G P YIY RY ST + E FPV ++ DGYR+ + T Sbjct: 159 IRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYALGSHKWRAQATETATDS-----SFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC) HSP 1 Score: 239 bits (610), Expect = 5.050e-71 Identity = 127/290 (43.79%), Postives = 164/290 (56.55%), Query Frame = 2 Query: 113 SEACKLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR---RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDG 973 S+ + G+V+ VL V R+R+ LF G+FDTG+YPDE HWR+GIS A REI N WK+D+T+A++VL E GR A L GW SAR+AQD ++WKP G G V++HQDS YIS+QF+P NNS+T W ALDD D E G IEYAS + + P FH A +Y+ AA S G+ +V + VP G V H Q+ WHGS N S R RRAL VH +RGD +F++ P YIY RYK + L + FP + G Sbjct: 6 SKEARTSFRREGFVQLGEVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYASGSHEWEADRE--------LAPEFHAAR--DYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.780e-70 Identity = 135/276 (48.91%), Postives = 175/276 (63.41%), Query Frame = 2 Query: 146 GYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGW-GSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGRR-VEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAF-PVTFS 964 G++ +++D TV L+AR LF G+F+TG+YPDE HWREGISR DA REIVN WKAD V +VV S+ +G++A++L GW +RV QDD++WKPP G VAFHQD+AYIS QF P NNSVT+WIALDD D E G +EY + E+ PSS S+ +FH + Y P AA G++ E VAVP GG + H QD WHGSA N+S RHRRAL +H ++ D + + P YIY RY L + PE++F PVT+S Sbjct: 40 GFLLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEYCPGSHLW----DESGPSSAVSS-AFHSPSE-GYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYV-LPGSHTPEDSFFPVTYS 302
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.990e-70 Identity = 135/290 (46.55%), Postives = 169/290 (58.28%), Query Frame = 2 Query: 146 GYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGS-ARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG-RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYK-GLDSTVLPEEAFPVTFSQDGYRTKWIDTFLA 1006 G+V V+ LR LF G+F GVYPDE HWREGIS+ DA REIVN WKA VA V LSE +GRLAA L GW + AR+ QDD++WKP G G VAFH D+AYIS F P +NSVT+WIALDD D E G + YA + P ++ +S + +FHG R PA AA + G +F+ + VP GG V H QD WHGS PN+S +R RRAL +H++R DA F + P YIY RY G T + E FP+ ++ GYR+ D A Sbjct: 14 GFVARPGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAETGVVAYAPGSHAW-PSAADKEKASVTDA-AFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSPVCDIACA 295
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.630e-69 Identity = 143/316 (45.25%), Postives = 178/316 (56.33%), Query Frame = 2 Query: 131 KLAERGYVKGLH-VLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPG--------------------CGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRP---------EESENPPSSPSSTPSFHGANALNYRAPAEAAA--LSLGRRVE-FDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGT------GGPTYIYSRYKGLDSTVLPEEAFPVTF 961 +L+ RG+ H +L T A +R RLP LF GEFDTG YPDE HWREGIS++ A REI NAWK+DRT+A+VVL+E LGRL A + W S R+AQDD+VWKPP V FHQDSAYIS QF P +NSVT+W+AL+D D+E G +EYA + RP E E S S SFH A+ +YR AA G E +AV V G + H QD +HGS PN+S RHRRALV H+IRGD F+ S + G +YIY RY+ +S + FPV + Sbjct: 25 RLSARGFAPTNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA) HSP 1 Score: 239 bits (610), Expect = 7.180e-69 Identity = 149/359 (41.50%), Postives = 187/359 (52.09%), Query Frame = 2 Query: 140 ERGYVKGL-HVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGP----------------VAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRP------------------EESENPPSSP------SSTPSFHGANALNYRAPAEAAALSLG------------RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGT-------------GGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGY-----RTKWIDTFL 1003 +RGY K +L +R R+PL+F G FDTGVYPDE HWREGIS A REI NAWK+DRTVA+VVL E +G+L A + GW S RVAQDD+VWK P G V FHQDSAYIS+QF P NNS+T+WI+LDD D E G +EYA + RP ES P+ S SFH + + YR AA+S G V +A V G + H QD WHGS PN S RHRRALVVH+++GD F + + +G G TYIY RYK S + E+ FP+ +++D RT W+D+F+ Sbjct: 92 QRGYAKSKGRILSKDRCLAIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGSLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFI 450
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA) HSP 1 Score: 233 bits (593), Expect = 4.220e-68 Identity = 138/282 (48.94%), Postives = 164/282 (58.16%), Query Frame = 2 Query: 131 KLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWG-SARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG---RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFS 964 KLA G+V VL V R R LF G FDTG+YPDE HWREGIS+ DA REIVN WKAD +A VV S LG+LA L GW AR+AQDDV+WKPP G VAFHQDSAYIS QF P NNSVTIWIALDD D++ G +EY + L P ++ S FHG ++ P AA S G +E + V G +VH QD WHGSA ++S+ RHRRAL VH +R D + D T P YIY RY +E FP T++ Sbjct: 42 KLARDGFVAVGKVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEYCVGSH-LWPNNKAKETTASGSA--FHGQ--AHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: L8H5R3_ACACA (PhytanoylCoA dioxygenase (PhyH) superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5R3_ACACA) HSP 1 Score: 227 bits (578), Expect = 9.390e-66 Identity = 130/296 (43.92%), Postives = 171/296 (57.77%), Query Frame = 2 Query: 125 KLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR-RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDTFLAS 1009 K + + G++ ++D + ++ R PLLF GEFDTGVYPDE HWREG+ R D REIVN+WK+D T+A+ VLSE LGRLAA LAGW RV QDD+ WKPPG V+FHQD+ Y F+ +T WIALDD R GT+EY + P+ES+ ++ F A +YRA + A LG R E V VP GG H+ WHGS PN R RR+L +HF+ A F Q TG YIY RYK S + E FP+T+ DGYR+ ++ ++ ++ Sbjct: 45 KAQFQDDGFLVVDRLIDPSLAEAIKNRFPLLFRGEFDTGVYPDEWHWREGMGRDDVTREIVNSWKSDYTIASAVLSERLGRLAAELAGWMGTRVGQDDIWWKPPGTKAVSFHQDAPYFD--FLNPRRELITCWIALDDTSRTAGTLEYVRGSHKW-PQESKMLQNA------FF--TAQDYRASLDHTAKHLGLPRPEVVPVEVPAGGAAFHSGPTWHGSGPNTDKTRVRRSLAIHFLPSHATF------QPTG-VGYIYGRYKKWGSVEMEETFFPITYRHDGYRSPFLASYCST 322 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig996.18889.1 >prot_L-elsbetiae_contig996.18889.1 ID=prot_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp MLMSFRARQRRALSVLASVDCCAASEACKLKLAERGYVKGLHVLDGATVAback to top mRNA from alignment at L-elsbetiae_contig996:11234..14929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig996.18889.1 ID=mRNA_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3696bp|location=Sequence derived from alignment at L-elsbetiae_contig996:11234..14929+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig996:11234..14929+ >mRNA_L-elsbetiae_contig996.18889.1 ID=mRNA_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1944bp|location=Sequence derived from alignment at L-elsbetiae_contig996:11234..14929+ (Laminarionema elsbetiae ELsaHSoW15)back to top |