mRNA_L-elsbetiae_contig996.18889.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig996.18889.1
Unique NamemRNA_L-elsbetiae_contig996.18889.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 7.240e-158
Identity = 239/316 (75.63%), Postives = 257/316 (81.33%), Query Frame = 2
Query:   62 RQRRALSVLASVDCCAASEACKLKLAERGY--VKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGRRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDTFL 1003
            +QRR  SV+  VD      A    LAERGY  VKGL VLD  TVA LR RLPLLF GEFDTGVYPDEMHWREGISR DAPREIVNAWKADRTVA+VVLSE L RLAASLAGW SAR+AQDDVVWKPPG GPV +HQDSAYISRQF PRANNSVT+WIALDDCDRE    + ++               S SS PSFHGA+A NYRAPAEAAALSLGRRVEF+AVAV PG CVVHAQDCWHGSAPN+SA+RHRRALVVHF+RGDARFIDGHS+Q TGGP+YIYSRYK LDS  LPEEAFP+TFS+DGYRT WIDTFL
Sbjct:   11 QQRRTFSVV--VD-----GAASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREGSAADSST---------------SRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP)

HSP 1 Score: 251 bits (641), Expect = 5.740e-75
Identity = 134/290 (46.21%), Postives = 171/290 (58.97%), Query Frame = 2
Query:  113 SEACKLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR---RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDG 973
            S+  K     +G+++   VL+   V   RAR+  LF GEFDTG+YPDE HWR+GIS   A REI N WK+DR +A++VL E  GR A  L GW SAR+AQD V+WKP G G V++HQDS YISRQF P  +NS+T W ALDD D E G IEYA+ +   +P     P         FHG    +Y+ P   AA S G+   +VE   + VP G  VVH Q+ WHGS  N S +R RRAL +H +RGD +F++         P YIY RYK  D+  L +  FP  +  DG
Sbjct:   56 SDEAKRSFWSKGFLQLGQVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYAAGSHEWQPRRELEP--------QFHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL)

HSP 1 Score: 249 bits (636), Expect = 5.840e-73
Identity = 135/272 (49.63%), Postives = 172/272 (63.24%), Query Frame = 2
Query:  194 LRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGS-ARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG---RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDT 997
            +R R   LF G+F+TGVYPDE HWREG+S   A REIVN WK DR VA++ LSE LG LA+ L GW   AR+AQDDV+WKPPG   + +HQDSAYIS QF+P  NNSVT+WIALD+   E G +EYA  +   R + +E    S     SFH  +  ++RA   AAA ++G     V+F+  +VP GGC++H  D WHGS PN S + HRRAL VH +R D +F      +G   P YIY RY    ST + E  FPV ++ DGYR+  + T
Sbjct:  159 IRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYALGSHKWRAQATETATDS-----SFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC)

HSP 1 Score: 239 bits (610), Expect = 5.050e-71
Identity = 127/290 (43.79%), Postives = 164/290 (56.55%), Query Frame = 2
Query:  113 SEACKLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR---RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDG 973
            S+  +      G+V+   VL    V   R+R+  LF G+FDTG+YPDE HWR+GIS   A REI N WK+D+T+A++VL E  GR A  L GW SAR+AQD ++WKP G G V++HQDS YIS+QF+P  NNS+T W ALDD D E G IEYAS +     +            P FH A   +Y+     AA S G+   +V    + VP G  V H Q+ WHGS  N S  R RRAL VH +RGD +F++         P YIY RYK  +   L +  FP  +   G
Sbjct:    6 SKEARTSFRREGFVQLGEVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYASGSHEWEADRE--------LAPEFHAAR--DYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.780e-70
Identity = 135/276 (48.91%), Postives = 175/276 (63.41%), Query Frame = 2
Query:  146 GYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGW-GSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGRR-VEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAF-PVTFS 964
            G++   +++D  TV  L+AR   LF G+F+TG+YPDE HWREGISR DA REIVN WKAD  V +VV S+ +G++A++L GW   +RV QDD++WKPP  G VAFHQD+AYIS QF P  NNSVT+WIALDD D E G +EY   +        E+ PSS  S+ +FH  +   Y  P   AA   G++  E   VAVP GG + H QD WHGSA N+S  RHRRAL +H ++ D  +      +    P YIY RY  L  +  PE++F PVT+S
Sbjct:   40 GFLLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEYCPGSHLW----DESGPSSAVSS-AFHSPSE-GYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYV-LPGSHTPEDSFFPVTYS 302          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA)

HSP 1 Score: 237 bits (605), Expect = 4.990e-70
Identity = 135/290 (46.55%), Postives = 169/290 (58.28%), Query Frame = 2
Query:  146 GYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGS-ARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG-RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYK-GLDSTVLPEEAFPVTFSQDGYRTKWIDTFLA 1006
            G+V    V+       LR     LF G+F  GVYPDE HWREGIS+ DA REIVN WKA   VA V LSE +GRLAA L GW + AR+ QDD++WKP G G VAFH D+AYIS  F P  +NSVT+WIALDD D E G + YA  +    P  ++   +S +   +FHG      R PA  AA + G    +F+ + VP GG V H QD WHGS PN+S +R RRAL +H++R DA F +         P YIY RY  G   T + E  FP+ ++  GYR+   D   A
Sbjct:   14 GFVARPGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAETGVVAYAPGSHAW-PSAADKEKASVTDA-AFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSPVCDIACA 295          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.630e-69
Identity = 143/316 (45.25%), Postives = 178/316 (56.33%), Query Frame = 2
Query:  131 KLAERGYVKGLH-VLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPG--------------------CGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRP---------EESENPPSSPSSTPSFHGANALNYRAPAEAAA--LSLGRRVE-FDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGT------GGPTYIYSRYKGLDSTVLPEEAFPVTF 961
            +L+ RG+    H +L   T A +R RLP LF GEFDTG YPDE HWREGIS++ A REI NAWK+DRT+A+VVL+E LGRL A +  W S R+AQDD+VWKPP                        V FHQDSAYIS QF P  +NSVT+W+AL+D D+E G +EYA  +   RP          E E    S S   SFH A+  +YR     AA     G   E  +AV V  G  + H QD +HGS PN+S  RHRRALV H+IRGD  F+   S   +      G  +YIY RY+  +S  +    FPV +
Sbjct:   25 RLSARGFAPTNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA)

HSP 1 Score: 239 bits (610), Expect = 7.180e-69
Identity = 149/359 (41.50%), Postives = 187/359 (52.09%), Query Frame = 2
Query:  140 ERGYVKGL-HVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGP----------------VAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRP------------------EESENPPSSP------SSTPSFHGANALNYRAPAEAAALSLG------------RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGT-------------GGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGY-----RTKWIDTFL 1003
            +RGY K    +L       +R R+PL+F G FDTGVYPDE HWREGIS   A REI NAWK+DRTVA+VVL E +G+L A + GW S RVAQDD+VWK P  G                 V FHQDSAYIS+QF P  NNS+T+WI+LDD D E G +EYA  +   RP                   ES   P+        S   SFH + +  YR     AA+S G              V  +A  V  G  + H QD WHGS PN S  RHRRALVVH+++GD  F +  + +G              G  TYIY RYK   S  + E+ FP+ +++D       RT W+D+F+
Sbjct:   92 QRGYAKSKGRILSKDRCLAIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGSLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFI 450          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.220e-68
Identity = 138/282 (48.94%), Postives = 164/282 (58.16%), Query Frame = 2
Query:  131 KLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWG-SARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLG---RRVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFS 964
            KLA  G+V    VL    V   R R   LF G FDTG+YPDE HWREGIS+ DA REIVN WKAD  +A VV S  LG+LA  L GW   AR+AQDDV+WKPP  G VAFHQDSAYIS QF P  NNSVTIWIALDD D++ G +EY   +  L P       ++  S   FHG    ++  P   AA S G     +E   + V  G  +VH QD WHGSA ++S+ RHRRAL VH +R D  + D      T  P YIY RY         +E FP T++
Sbjct:   42 KLARDGFVAVGKVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEYCVGSH-LWPNNKAKETTASGSA--FHGQ--AHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312          
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Match: L8H5R3_ACACA (PhytanoylCoA dioxygenase (PhyH) superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5R3_ACACA)

HSP 1 Score: 227 bits (578), Expect = 9.390e-66
Identity = 130/296 (43.92%), Postives = 171/296 (57.77%), Query Frame = 2
Query:  125 KLKLAERGYVKGLHVLDGATVAGLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAAVVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQFVPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPSFHGANALNYRAPAEAAALSLGR-RVEFDAVAVPPGGCVVHAQDCWHGSAPNISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPEEAFPVTFSQDGYRTKWIDTFLAS 1009
            K +  + G++    ++D +    ++ R PLLF GEFDTGVYPDE HWREG+ R D  REIVN+WK+D T+A+ VLSE LGRLAA LAGW   RV QDD+ WKPPG   V+FHQD+ Y    F+      +T WIALDD  R  GT+EY   +    P+ES+   ++      F    A +YRA  +  A  LG  R E   V VP GG   H+   WHGS PN    R RR+L +HF+   A F      Q TG   YIY RYK   S  + E  FP+T+  DGYR+ ++ ++ ++
Sbjct:   45 KAQFQDDGFLVVDRLIDPSLAEAIKNRFPLLFRGEFDTGVYPDEWHWREGMGRDDVTREIVNSWKSDYTIASAVLSERLGRLAAELAGWMGTRVGQDDIWWKPPGTKAVSFHQDAPYFD--FLNPRRELITCWIALDDTSRTAGTLEYVRGSHKW-PQESKMLQNA------FF--TAQDYRASLDHTAKHLGLPRPEVVPVEVPAGGAAFHSGPTWHGSGPNTDKTRVRRSLAIHFLPSHATF------QPTG-VGYIYGRYKKWGSVEMEETFFPITYRHDGYRSPFLASYCST 322          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig996.18889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W5_ECTSI7.240e-15875.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0E1W7_9CRYP5.740e-7546.21Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4GPA4_9EUGL5.840e-7349.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
L1I9R4_GUITC5.050e-7143.79Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2S8Y4_9STRA2.780e-7048.91Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1XNM5_9STRA4.990e-7046.55Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S0FL38_9STRA1.630e-6945.25Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A6U3ZUB2_9STRA7.180e-6941.50Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A2R5GIF2_9STRA4.220e-6848.94Phytanoyl-CoA dioxygenase domain-containing protei... [more]
L8H5R3_ACACA9.390e-6643.92PhytanoylCoA dioxygenase (PhyH) superfamily protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig996contigL-elsbetiae_contig996:11234..14929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.2
Seed ortholog evalue5.2e-128
Seed eggNOG ortholog2880.D7G6W5
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Phytanoyl-CoA dioxygenase (PhyH)
EggNOG OGs2BUAT@1,2S22Y@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1787
Cds size972
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817054.6473515-UTR-L-elsbetiae_contig996:11233..112731622817054.6473515-UTR-L-elsbetiae_contig996:11233..11273Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig996 11234..11273 +
1691684012.832811-UTR-L-elsbetiae_contig996:11233..112731691684012.832811-UTR-L-elsbetiae_contig996:11233..11273Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig996 11234..11273 +
1622817054.723105-UTR-L-elsbetiae_contig996:14154..149291622817054.723105-UTR-L-elsbetiae_contig996:14154..14929Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig996 14155..14929 +
1691684012.8940551-UTR-L-elsbetiae_contig996:14154..149291691684012.8940551-UTR-L-elsbetiae_contig996:14154..14929Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig996 14155..14929 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817054.6624813-CDS-L-elsbetiae_contig996:11273..115341622817054.6624813-CDS-L-elsbetiae_contig996:11273..11534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 11274..11534 +
1691684012.844582-CDS-L-elsbetiae_contig996:11273..115341691684012.844582-CDS-L-elsbetiae_contig996:11273..11534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 11274..11534 +
1622817054.674848-CDS-L-elsbetiae_contig996:12505..127001622817054.674848-CDS-L-elsbetiae_contig996:12505..12700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 12506..12700 +
1691684012.8570578-CDS-L-elsbetiae_contig996:12505..127001691684012.8570578-CDS-L-elsbetiae_contig996:12505..12700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 12506..12700 +
1622817054.6850393-CDS-L-elsbetiae_contig996:13066..131241622817054.6850393-CDS-L-elsbetiae_contig996:13066..13124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 13067..13124 +
1691684012.8659399-CDS-L-elsbetiae_contig996:13066..131241691684012.8659399-CDS-L-elsbetiae_contig996:13066..13124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 13067..13124 +
1622817054.6981533-CDS-L-elsbetiae_contig996:13397..137171622817054.6981533-CDS-L-elsbetiae_contig996:13397..13717Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 13398..13717 +
1691684012.8749688-CDS-L-elsbetiae_contig996:13397..137171691684012.8749688-CDS-L-elsbetiae_contig996:13397..13717Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 13398..13717 +
1622817054.7125971-CDS-L-elsbetiae_contig996:14016..141541622817054.7125971-CDS-L-elsbetiae_contig996:14016..14154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 14017..14154 +
1691684012.8839345-CDS-L-elsbetiae_contig996:14016..141541691684012.8839345-CDS-L-elsbetiae_contig996:14016..14154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig996 14017..14154 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig996.18889.1prot_L-elsbetiae_contig996.18889.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig996 11274..14154 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig996.18889.1

>prot_L-elsbetiae_contig996.18889.1 ID=prot_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MLMSFRARQRRALSVLASVDCCAASEACKLKLAERGYVKGLHVLDGATVA
GLRARLPLLFCGEFDTGVYPDEMHWREGISRQDAPREIVNAWKADRTVAA
VVLSEGLGRLAASLAGWGSARVAQDDVVWKPPGCGPVAFHQDSAYISRQF
VPRANNSVTIWIALDDCDREVGTIEYASMTEPLRPEESENPPSSPSSTPS
FHGANALNYRAPAEAAALSLGRRVEFDAVAVPPGGCVVHAQDCWHGSAPN
ISAKRHRRALVVHFIRGDARFIDGHSIQGTGGPTYIYSRYKGLDSTVLPE
EAFPVTFSQDGYRTKWIDTFLAS*
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mRNA from alignment at L-elsbetiae_contig996:11234..14929+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig996.18889.1 ID=mRNA_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3696bp|location=Sequence derived from alignment at L-elsbetiae_contig996:11234..14929+ (Laminarionema elsbetiae ELsaHSoW15)
ACTGCTGTGTACGTAGCAGGTTGTGGCGGTGTTACATAGAATGCTGATGT CCTTTAGAGCCAGGCAGCGACGTGCTCTCTCGGTCCTTGCAAGTGTTGAT TGCTGTGCAGCTTCAGAGGCTTGCAAGCTCAAGTTAGCCGAACGAGGGTA TGTGAAAGGGCTGCATGTGCTAGATGGAGCAACGGTAGCAGGGCTTCGTG CAAGGCTACCCCTTCTCTTCTGTGGCGAGTTCGACACTGGCGTCTACCCG GATGAGATGCACTGGCGGGAAGGAATATCGAGGCAAGATGCACCGCGCGA GGTGTGTGTAGTCTATGCGTGTATGTATGCGCGCTTCGATCATTTTACAA CAGTCTCGCGGGTGCTACAAACAAATGCGTATGTAGGATATCGCAAAAAA AAAAGGGAGCGAAACCCACCTGCTTATATACACACAGAAAAGCGGCAAAC CGACCGTAGACTAGAGCAGACTTCCGGCCGACACGCACACTGTGGGGGAA AGGAGTCTTGTATCCCTTCTGAGCTTGGAGGTTCGTCAAGGTTCGTCAAG GTTTGAAGATCTCTTTGTTGGTTGACTCTTTTCTAGGCTATCGGACTAAG GGCAACAGGAGAGAAGAAGAGTGAGAGAATGCGCGACCCCACTCTTCCAT TTCTCTTGGTCGTGGCTTCCCCAAATATAACCCGTTACAGACACTTGCTA CAATTGCTAGAATACGCACGTACATACTTTTTTTCATTGGCCTACTAGCT ACCGTTGGGCCCTTGAGAGACACACGCAACCTGAGCCACTAGATAGATCG TATCAAGTTGTAGGTCGGAATCCGTCTCCGCACCTCTACCACACGTCAAC CCTGAGTAGAGGCGTCCATCTCGTAACCGACAGCTCTTACTTCAAGTCAT CAACGGTCATGCAGCAGTTGTCCCGCATCGATGACGTCATTTAGCCATGA CGTCATTCTAGAATCATTGAACATCCACTTTCACCACATCCCCGTGGATC ACGACCGTGAAACGATGCCCCGCGACTCCGGTGTCGTTACCCCGACAGCC GGGAGGGGGGCGGGTAGTCAACATCGTCCGAGCCCACGCACGAAGAGATT TTTGCGCGAGCAGATAATTGGTAGTTTTATTTCGCCCAAGGGTACCAGCA TGTACAGAATGAAGACTATGTGTAGGACAAGCAAGCACTATCTACGTGTT ACACGGGCATGTTTCGGCCTTGCAGATTCTCCCGGCTCAAGCTTGTCGCG TCGCGGTCCGTGCTGTCAATAGATTGTGAACGCATGGAAGGCGGATCGAA CCGTGGCTGCCGTTGTCCTGAGCGAAGGCCTGGGGAGGCTTGCCGCTTCG CTCGCAGGCTGGGGTTCCGCTAGAGTTGCGCAGGATGATGTGGTTTGGAA GCCACCGGGCTGTGGGCCTGTGGCTTTCCATCAAGATTCGGCCTACATCA GCCGCCAGTTCGTCCCGGTGAGTAATCTTTCCTCGACCTCCGGGGTGGAT TGCGGCCATGGTCGCGCGCATCAAATGAGATCGTGTCATCGTGGTGTATG TAAGCTATCGACTTCCAATTAGTATCAACCGACGCGAGATCTACATACGT ACCTACATAAAACAGCCCATCACCCATCCGCCGTGTAACCCCGTCACCGC AAGTTTCACGATTCGAGGCCCTTCAGGCAATGATAGCAATAGCATAGCAT AGGAGAGTAGCATCGGAAGCTTCGCGTAAACAGCCTGACATTTCGACAGG GTCGGGGTACTTCACGGGTGCGGACTGCAACCCCGTCCATCCTGATGCCC CTCCCTGCCCCTGCGTCTTTTGTTTTGAACCAGAGAGCAAACAACTCGGT GACGATATGGATCGCGCTGGATGACTGCGATCGGGAGGTAGGTGAGCACG GTGTTGGGTTCAGAATGGATCGGGCGTTGATTGTCGCGCTACTCGGCATG CCCCCGTCGCTGAAAGGGGGCGCAGTGGATTGCCGGCGCTGCTCTCAGAA GGCAGGAAGGGCCAGCTTTGGCGATCATTCTGGAACGTGCATCTCGCCGG GGGCGAATTCTCCTATAACTAGTTCTTCATGTCTGTGCTTCGGGGTTACG TCTGCGTGCGCGCATGCCGTGCTGCAAAACACTTTTCCATCGCTCCGCAC TCTGTCCGCATCAGGGACGATCGAGTACGCCTCCATGACGGAACCACTCC GACCGGAAGAGTCGGAAAACCCGCCGTCTAGCCCATCCTCCACCCCCTCC TTCCACGGAGCCAATGCGCTCAACTACCGCGCACCGGCAGAGGCGGCTGC TCTGAGCCTCGGGCGCCGGGTGGAATTCGATGCGGTCGCTGTGCCGCCTG GAGGGTGTGTGGTGCACGCGCAGGACTGCTGGCATGGTAGCGCCCCCAAC ATTTCGGCGAAGCGCCACCGTCGAGCTCTGGTGGTGCACTTTATCAGAGG AGATGCGAGATTCATCGATGGCCACTCGATCCAGGTTTGACATTTGTAGA CTAAATAGTTGTTGTGCTGGTATTTTTCAAGGTGGCCTCGAGAAAATGGG GTTGGTTGAGTGAGATGACCCGTCTTGCTGAAAGCTCAGGAACGGAAGCT GACTCTGCCCAGATCAGACAGGGATAGCGAGCGGGGACGCTAAGGTTTAG GTATCGACTGAAGGATCCTCCCTAAACGTGTACTTGTAGAAGTACCCTAC GATAACCCATTGTCTCGTCAATCGGGTGTGCCAACGTCTCTCCACCCTCA CAACATACCAATGTTGCCCCACCCACGTCGCAGGGAACCGGTGGTCCTAC GTATATCTACAGCAGATACAAGGGGCTTGACAGCACCGTGCTTCCCGAGG AGGCGTTTCCCGTCACGTTCTCCCAAGACGGGTACCGCACAAAGTGGATC GACACCTTTCTCGCGTCGTAGATCGATGGCTGGCGTGTTTGATGTTTTCC GAACTCGCCGAGTTGCTTGAGGGCGGAGGCTTGGGTTCTGTCCATCGATA TCAGGACCTTTGTTTTGTGAGGCAAGAAGGATTACGCTCGATAATGTTAA GGATTACGTGACGATGCTCAACATCAAGATCGACTCACGCTCTTCGCCTG GGTATGTCATGGCGACGCCGCTGGATAGGTGCAAGATTGCAAGGCTGTTT AAGAGTCGTAGAACTGAAAAGGAAGTTGCAAGTTGTGCAGTGCACGTTGT TACGTAAATATTTTGAACTTTTGCATGTCGCAGAGCAATGGTCCACTCCA AGACGGTGCTTCCGTTGCAATACAAGCTGGATTGAGCTAGAAGCTCATTT TTGTTCGTTCAGGTCTAGCTCTGCCGTTTTCACGAGTTTAGGCTTGAAAT TTGGTGGCTGCTTCTGTATAATCATGAAGAACGTGCCGGTGCCGGAAATT TTTGAATCCGATTTGATTTAGGAAAAAATAGATCAATTGGCGGCGTGATT GTGAGGTGTCCTATGGTGAAATCGACACAAACAAAAAGTGTCGCGGATCG GCCTGAAAATTGGTGTGCGTGTACCTGGGAGCACCACAAGATGGTGGATA CTGTTTTCAAGGCTCAGTTCATCTCCTGCCAAGAGTTCTGGCCTTGCAAA GATTCCAATACAAAGCATAAGATACTGAGCAAATATAGGAATATCTCGAT TTCTCACGCGGTTTTTACGAATTAGGACCTGATTTTTTGGCACGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig996:11234..14929+

>mRNA_L-elsbetiae_contig996.18889.1 ID=mRNA_L-elsbetiae_contig996.18889.1|Name=mRNA_L-elsbetiae_contig996.18889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1944bp|location=Sequence derived from alignment at L-elsbetiae_contig996:11234..14929+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGATGTCCTTTAGAGCCAGGCAGCGACGTGCTCTCTCGGTCCTTGC
AAGTGTTGATTGCTGTGCAGCTTCAGAGGCTTGCAAGCTCAAGTTAGCCG
AACGAGGGTATGTGAAAGGGCTGCATGTGCTAGATGGAGCAACGGTAGCA
GGGCTTCGTGCAAGGCTACCCCTTCTCTTCTGTGGCGAGTTCGACACTGG
CGTCTACCCGGATGAGATGCACTGGCGGGAAGGAATATCGAGGCAAGATG
CACCGCGCGAGATGCTGATGTCCTTTAGAGCCAGGCAGCGACGTGCTCTC
TCGGTCCTTGCAAGTGTTGATTGCTGTGCAGCTTCAGAGGCTTGCAAGCT
CAAGTTAGCCGAACGAGGGTATGTGAAAGGGCTGCATGTGCTAGATGGAG
CAACGGTAGCAGGGCTTCGTGCAAGGCTACCCCTTCTCTTCTGTGGCGAG
TTCGACACTGGCGTCTACCCGGATGAGATGCACTGGCGGGAAGGAATATC
GAGGCAAGATGCACCGCGCGAGATTGTGAACGCATGGAAGGCGGATCGAA
CCGTGGCTGCCGTTGTCCTGAGCGAAGGCCTGGGGAGGCTTGCCGCTTCG
CTCGCAGGCTGGGGTTCCGCTAGAGTTGCGCAGGATGATGTGGTTTGGAA
GCCACCGGGCTGTGGGCCTGTGGCTTTCCATCAAGATTCGGCCTACATCA
GCCGCCAGTTCGTCCCGATTGTGAACGCATGGAAGGCGGATCGAACCGTG
GCTGCCGTTGTCCTGAGCGAAGGCCTGGGGAGGCTTGCCGCTTCGCTCGC
AGGCTGGGGTTCCGCTAGAGTTGCGCAGGATGATGTGGTTTGGAAGCCAC
CGGGCTGTGGGCCTGTGGCTTTCCATCAAGATTCGGCCTACATCAGCCGC
CAGTTCGTCCCGAGAGCAAACAACTCGGTGACGATATGGATCGCGCTGGA
TGACTGCGATCGGGAGGTAGAGAGCAAACAACTCGGTGACGATATGGATC
GCGCTGGATGACTGCGATCGGGAGGTAGGGACGATCGAGTACGCCTCCAT
GACGGAACCACTCCGACCGGAAGAGTCGGAAAACCCGCCGTCTAGCCCAT
CCTCCACCCCCTCCTTCCACGGAGCCAATGCGCTCAACTACCGCGCACCG
GCAGAGGCGGCTGCTCTGAGCCTCGGGCGCCGGGTGGAATTCGATGCGGT
CGCTGTGCCGCCTGGAGGGTGTGTGGTGCACGCGCAGGACTGCTGGCATG
GTAGCGCCCCCAACATTTCGGCGAAGCGCCACCGTCGAGCTCTGGTGGTG
CACTTTATCAGAGGAGATGCGAGATTCATCGATGGCCACTCGATCCAGGG
ACGATCGAGTACGCCTCCATGACGGAACCACTCCGACCGGAAGAGTCGGA
AAACCCGCCGTCTAGCCCATCCTCCACCCCCTCCTTCCACGGAGCCAATG
CGCTCAACTACCGCGCACCGGCAGAGGCGGCTGCTCTGAGCCTCGGGCGC
CGGGTGGAATTCGATGCGGTCGCTGTGCCGCCTGGAGGGTGTGTGGTGCA
CGCGCAGGACTGCTGGCATGGTAGCGCCCCCAACATTTCGGCGAAGCGCC
ACCGTCGAGCTCTGGTGGTGCACTTTATCAGAGGAGATGCGAGATTCATC
GATGGCCACTCGATCCAGGGAACCGGTGGTCCTACGTATATCTACAGCAG
ATACAAGGGGCTTGACAGCACCGTGCTTCCCGAGGAGGCGTTTCCCGTCA
CGTTCTCCCAAGACGGGTACCGCACAAAGTGGATCGACACCTTTCTCGCG
TCGTAGGGAACCGGTGGTCCTACGTATATCTACAGCAGATACAAGGGGCT
TGACAGCACCGTGCTTCCCGAGGAGGCGTTTCCCGTCACGTTCTCCCAAG
ACGGGTACCGCACAAAGTGGATCGACACCTTTCTCGCGTCGTAG
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