mRNA_L-elsbetiae_contig9888.18825.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.370e-75 Identity = 127/164 (77.44%), Postives = 141/164 (85.98%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 494 IDFKIKT L+G+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV D+KSFKNV NWMRQIELNA PDVN+TLVGNK DV E+ER VS EQG+ LAAEHG+ VRFFETSARSNVNVTEAFEGLATDVI RLQ QD+A++A V LKLG+ + K +DCC Sbjct: 46 IDFKIKTVFLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEPTKK--SDCC 207
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.890e-71 Identity = 119/154 (77.27%), Postives = 134/154 (87.01%), Query Frame = 3 Query: 33 LGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 494 +G+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV DVKSF+NV NWMRQIELNA PDVN+TLVGNK DV E ER VSFEQG+ LAAEHG+ VRFFETSARSNVNVTEAFEGLATDVI RLQ QD+A++A V LKLG+ ++ + +DCC Sbjct: 1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEESTEK--SDCC 152
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.200e-50 Identity = 100/168 (59.52%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLAD--CC 494 IDFK+KT ++ G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D SF+NV NWMRQI+ +A+P+VN L+GNKCDV+ ERAV+ EQG ALA E+G V+FFETSA+SN+NV EAF +A DV RL D++ +A +KL D S+ A CC Sbjct: 46 IDFKVKTIEVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKL---DEQNSRAASEGCC 208
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC) HSP 1 Score: 182 bits (461), Expect = 2.020e-49 Identity = 97/166 (58.43%), Postives = 122/166 (73.49%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLADCC 494 IDFK+KT D+ G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D SF+NV NWMRQI+ +A+P+VN L+GNKCDV+ ER V+ +QG LAAE+G V+FFETSA+SN+NV EAF +A DV RL D+ +A +KL D + +D C Sbjct: 45 IDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKL---DDHADRTSDGC 205
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: Q019D2_OSTTA (Small GTPase superfamily, Rab type n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q019D2_OSTTA) HSP 1 Score: 179 bits (453), Expect = 3.370e-48 Identity = 95/164 (57.93%), Postives = 120/164 (73.17%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 494 IDFKIKT +L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D +SF+NV WMR IE +A+ +VN L+GNKCDV+ED+R +S +G+ALA E G + FFETSA+S+VNV +AF +A D+ NRL G P + GD +K A CC Sbjct: 56 IDFKIKTVELGGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNKCDVKEDKRVISKARGQALADEFG--IPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSKGL---GAPNA-INLGDRAATKRASCC 213
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A1J3ISU9_NOCCA (Ras-related protein RAB1BV (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ISU9_NOCCA) HSP 1 Score: 175 bits (444), Expect = 9.190e-48 Identity = 94/155 (60.65%), Postives = 116/155 (74.84%), Query Frame = 3 Query: 36 GRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLADCC 494 G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D SF+NV NWMRQI+ +A+P+VN L+GNKCDV+ ERAV+ EQG ALAAE+G V+FFETSA+SN+NV EAF +A DV RL D+ +A +KL + A S+ CC Sbjct: 2 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECDSDRLDVANESRIKLDEQSARPSE--GCC 152
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.140e-47 Identity = 94/164 (57.32%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 494 IDFKIK+ L +K+KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D +SF NV NWMRQIE +A+ VN L+GNKCDV+ +R VS EQGR LA E+ R++FFETSA+ NVNV EAF +A D+ R+ + +G +K+G G P +CC Sbjct: 51 IDFKIKSLPLEDKKLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG-KNVKIGPGVGPAGG-KECC 210
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: C1MMC0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MMC0_MICPC) HSP 1 Score: 175 bits (444), Expect = 4.710e-47 Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 494 IDFKI+T +L G++VKLQIWDTAGQERFR IT+AYYRG+MGILL YDV D SF NV NWMR IE +A+ +VN LVGNKCD+E D+R +S +G+ALA E G + FFETSA++NV V +AF +A D+ NRL+ + A G +KLG G + CC Sbjct: 46 IDFKIRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMRNIEQHASENVNKILVGNKCDME-DKRVISHARGKALADEFG--IPFFETSAKANVKVEDAFFSIARDIKNRLKSDKENAGGG--GIKLGSGKGGSGSKSSCC 204
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A2I4E562_JUGRE (ras-related protein RABE1c-like n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A2I4E562_JUGRE) HSP 1 Score: 174 bits (442), Expect = 1.300e-46 Identity = 91/169 (53.85%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGD-----APKSKLADCC 494 IDFKI+T +L G+++KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D SF N+ NW+R IE +A+ +VN LVGNK D++E +RAV +G+ALA E+G ++FFETSA++N+NV E F +A D+ RL D A +PTLK+ K D ++ + CC Sbjct: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYG--IKFFETSAKTNMNVEEVFFSIARDIKRRLAETDSRA--ELPTLKINKADQTDGGGQAAQKSSCC 214
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A6A2YIZ8_HIBSY (Ras-related protein RABE1e n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YIZ8_HIBSY) HSP 1 Score: 174 bits (441), Expect = 1.590e-46 Identity = 91/166 (54.82%), Postives = 121/166 (72.89%), Query Frame = 3 Query: 3 IDFKIKTADLLGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGD--APKSKLADCC 494 IDFKI+T +L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV D SF N+ NW+R IE +A+ +VN LVGNK D++E +RAV QG+ALA E+G ++FFETSA++N+NV E F +A+D+ RL D A +K+ K D A ++ ++CC Sbjct: 50 IDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSQGQALADEYG--IKFFETSAKTNLNVEEVFFSIASDIKQRLTESDNKAEPAA--IKINKEDPGASSAQKSNCC 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9888.18825.1 >prot_L-elsbetiae_contig9888.18825.1 ID=prot_L-elsbetiae_contig9888.18825.1|Name=mRNA_L-elsbetiae_contig9888.18825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAback to top mRNA from alignment at L-elsbetiae_contig9888:914..7334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9888.18825.1 ID=mRNA_L-elsbetiae_contig9888.18825.1|Name=mRNA_L-elsbetiae_contig9888.18825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6421bp|location=Sequence derived from alignment at L-elsbetiae_contig9888:914..7334- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9888:914..7334- >mRNA_L-elsbetiae_contig9888.18825.1 ID=mRNA_L-elsbetiae_contig9888.18825.1|Name=mRNA_L-elsbetiae_contig9888.18825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig9888:914..7334- (Laminarionema elsbetiae ELsaHSoW15)back to top |