prot_L-elsbetiae_contig9888.18825.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9888.18825.1
Unique Nameprot_L-elsbetiae_contig9888.18825.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 3.710e-57
Identity = 93/125 (74.40%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGI+LVYDV DVKSF+NV NWMRQIELNA PDVN+TLVGNK DV E ER VSFEQG+ LAAEHG+ VRFFETSARSNVNVTEAFEGLATDVI RLQ QD+A++A V  LKLG+ ++  ++ +DCC
Sbjct:   30 MGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEES--TEKSDCC 152          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.990e-56
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGI+LVYDV D+KSFKNV NWMRQIELNA PDVN+TLVGNK DV E+ER VS EQG+ LAAEHG+ VRFFETSARSNVNVTEAFEGLATDVI RLQ QD+A++A V  LKLG+ +   +K +DCC
Sbjct:   85 MGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEP--TKKSDCC 207          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A1J3ISU9_NOCCA (Ras-related protein RAB1BV (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ISU9_NOCCA)

HSP 1 Score: 125 bits (314), Expect = 2.310e-34
Identity = 71/127 (55.91%), Postives = 89/127 (70.08%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILLVYDV D  SF+NV NWMRQI+ +A+P+VN  L+GNKCDV+  ERAV+ EQG ALAAE+G  V+FFETSA+SN+NV EAF  +A DV  RL     D+  +A    +KL +  A  S+   CC
Sbjct:   30 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECDSDRLDVANESRIKLDEQSARPSE--GCC 152          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.260e-32
Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLAD--CC 125
            MGILLVYDV D  SF+NV NWMRQI+ +A+P+VN  L+GNKCDV+  ERAV+ EQG ALA E+G  V+FFETSA+SN+NV EAF  +A DV  RL     D++ +A    +KL   D   S+ A   CC
Sbjct:   85 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKL---DEQNSRAASEGCC 208          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A6A4ZHT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHT8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.480e-32
Identity = 70/127 (55.12%), Postives = 87/127 (68.50%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQD--QAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILLVYDV D  SF+NV NWMRQI+ +A+P+VN  LV NKCDV+  ER VS EQG ALAAE+G  V+FFETSA+SN++V EAF  +A DV  RL   D  +  +A    LKL   D   ++ +D C
Sbjct:   17 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILVANKCDVDPSERVVSKEQGEALAAEYG--VQFFETSAKSNLHVDEAFRSIAVDVQKRLAESDSDRLDVANQTRLKL---DEQATRSSDGC 138          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 5.430e-31
Identity = 67/127 (52.76%), Postives = 86/127 (67.72%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQW--QDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILLVYDV D  SF+NV NWMRQI+ +A+P+VN  L+GNKCDV+  ER V+ +QG  LAAE+G  V+FFETSA+SN+NV EAF  +A DV  RL     D+  +A    +KL   D    + +D C
Sbjct:   84 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKL---DDHADRTSDGC 205          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.200e-30
Identity = 65/125 (52.00%), Postives = 83/125 (66.40%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILLVYDV D +SF NV NWMRQIE +A+  VN  L+GNKCDV+  +R VS EQGR LA E+  R++FFETSA+ NVNV EAF  +A D+  R+  +     +G   +K+G G  P     +CC
Sbjct:   90 MGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG-KNVKIGPGVGPAGGK-ECC 210          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: A0A7S2FKN1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKN1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.870e-30
Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPT--LKLGKGDAPKSKLADCC 125
            MGILLVYDV++  +F+NV NWMRQIEL+A  +VN  L+GNKCDV ED R VS  +GRALA ++   VRFFETSA++N  VTEAFE +  DV++RL    +  + G P   ++ G+G A  +K   CC
Sbjct:  138 MGILLVYDVSNPNTFQNVKNWMRQIELHAAENVNKVLIGNKCDVPEDVRQVSEAEGRALAEQYP-NVRFFETSAKANKGVTEAFEAITRDVVDRLA--KEGPVGGGPKGGVRPGQGGAAPNKKK-CC 260          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: Q019D2_OSTTA (Small GTPase superfamily, Rab type n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q019D2_OSTTA)

HSP 1 Score: 115 bits (287), Expect = 1.470e-29
Identity = 64/125 (51.20%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILLVYDV+D +SF+NV  WMR IE +A+ +VN  L+GNKCDV+ED+R +S  +G+ALA E G  + FFETSA+S+VNV +AF  +A D+ NRL         G P   +  GD   +K A CC
Sbjct:   95 MGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNKCDVKEDKRVISKARGQALADEFG--IPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSKGL---GAPNA-INLGDRAATKRASCC 213          
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Match: C1MMC0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MMC0_MICPC)

HSP 1 Score: 112 bits (281), Expect = 9.300e-29
Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    1 MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERAVSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQAAIAGVPTLKLGKGDAPKSKLADCC 125
            MGILL YDV D  SF NV NWMR IE +A+ +VN  LVGNKCD+E D+R +S  +G+ALA E G  + FFETSA++NV V +AF  +A D+ NRL+   + A  G   +KLG G       + CC
Sbjct:   85 MGILLTYDVTDETSFNNVRNWMRNIEQHASENVNKILVGNKCDME-DKRVISHARGKALADEFG--IPFFETSAKANVKVEDAFFSIARDIKNRLKSDKENAGGG--GIKLGSGKGGSGSKSSCC 204          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9888.18825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FME1_ECTSI3.710e-5774.40Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KUS8_9PHAE2.990e-5674.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1J3ISU9_NOCCA2.310e-3455.91Ras-related protein RAB1BV (Fragment) n=1 Tax=Nocc... [more]
A0A485LS68_9STRA1.260e-3255.04Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A6A4ZHT8_9STRA1.480e-3255.12Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067CHF2_SAPPC5.430e-3152.76Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
W7U3B0_9STRA1.200e-3052.00Rab8-family small gtpase n=2 Tax=Monodopsidaceae T... [more]
A0A7S2FKN1_9STRA2.870e-3052.76Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
Q019D2_OSTTA1.470e-2951.20Small GTPase superfamily, Rab type n=2 Tax=Ostreoc... [more]
C1MMC0_MICPC9.300e-2950.40Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 31..44
score: 50.09
coord: 69..91
score: 39.64
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..94
e-value: 1.3E-5
score: -28.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..94
e-value: 5.0E-12
score: 40.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..102
e-value: 4.2E-27
score: 96.7
NoneNo IPR availablePANTHERPTHR24073:SF1022coord: 1..106
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..106
NoneNo IPR availablePROSITEPS51419RABcoord: 1..125
score: 17.095
IPR001806Small GTPasePFAMPF00071Rascoord: 2..91
e-value: 1.0E-24
score: 87.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9888contigL-elsbetiae_contig9888:2627..4257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9888.18825.1mRNA_L-elsbetiae_contig9888.18825.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9888 914..7334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9888.18825.1 ID=prot_L-elsbetiae_contig9888.18825.1|Name=mRNA_L-elsbetiae_contig9888.18825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MGILLVYDVADVKSFKNVTNWMRQIELNATPDVNITLVGNKCDVEEDERA
VSFEQGRALAAEHGERVRFFETSARSNVNVTEAFEGLATDVINRLQWQDQ
AAIAGVPTLKLGKGDAPKSKLADCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase