mRNA_L-elsbetiae_contig984.18788.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: D7FIZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 6.970e-151 Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 2 Query: 608 RVASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEVI 1354 ++ASS+GVKQFVVPGSTV+DSRG+LELA++KPNVVF TAGVHPYHV+GCG LEDAMA IATLAA E+ RCVGECGLDYSEGFP+AELQLPWFERQVELACKLKKPLFLHERAAF DF+EVLRRYDA HGLPPCLVHCFTG E+EL Y+DMGFF+SVAGGICREKSGAALR AVKR+PLDRLMVETDAPYLGF+GCRKGH KPKKQ PN PSALPAVVRVLAECL LPFE+VAQAT +NSR FFGM + Sbjct: 97 QIASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVLAECLGLPFEEVAQATLQNSRQFFGMATL 345
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A835Z870_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA) HSP 1 Score: 291 bits (745), Expect = 3.880e-91 Identity = 142/246 (57.72%), Postives = 182/246 (73.98%), Query Frame = 2 Query: 611 VASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALH-GLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGM 1345 +A +GV+Q VVPGS + DS+ AL+LA++ P +++PTAG+HPY V+ CG LE AM+ +A L A CVGECGLD+SEGFP ELQLP+FERQV+LA + +KPLFLHER A F +VLR +A GLPPCLVHCFTG EL+ Y+ MGF+I V G + ++ G LR +++VPLDRLMVETDAPYLGF GCRKGHS+PK+Q PN PSALP VV+ +A+ + + DVA + N+R FFGM Sbjct: 72 MARDVGVRQMVVPGSDLADSKAALDLARKYPGILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLRGCLQQVPLDRLMVETDAPYLGFPGCRKGHSQPKRQYPNVPSALPLVVQAVADAMGVSALDVAAHSTRNARKFFGM 317
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A5D6YB90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB90_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.050e-73 Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCR-KGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351 A++ GV + +VPG+T+D+SR AL L++ P+ +F TAGVHPY+ + + ++ LA L + R VGECGLDYS GFP AE Q WF Q+ELAC+L++PLFLHER A DF + A G PP +VHCFTG E+EL YV GF+I V G +CR++ GA LRE ++ VPL RL++ETDAPY+GF CR + + PKKQ PN PSALP V +A L L ++VA AT N+R F + V Sbjct: 95 AAAAGVSEMLVPGATLDESRAALTLSRDHPHTLFATAGVHPYNAHAAPETHE-LEELEALAVLPECRAVGECGLDYSPGFPPAEPQREWFRAQLELACRLRQPLFLHERLAHDDFVATVASCQARFGDAFPPAVVHCFTGTERELRAYVARGFYIGVTGFVCRKELGAPLREMLRLVPLQRLVIETDAPYMGFPKCRGREPTDPKKQYPNVPSALPLVAETVAAALGLTAQEVATATRANARRFLRLSV 342
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: K3WCX9_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD) HSP 1 Score: 242 bits (618), Expect = 1.230e-72 Identity = 118/248 (47.58%), Postives = 169/248 (68.15%), Query Frame = 2 Query: 617 SSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGH-SKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351 ++ GV + +VPG+T+++S+ A++L ++ P +FPTAGVHPYH E+ +A ++ LA LE+ R VGECGLDYS FP A+LQ WF+ Q++LAC+L+KPLFLHER A DF ++++ PP +VHCFTG+E+EL YV GF+I + G IC+++ GA+LR V+ +PL +L++ETDAPY+GF CR+ S PKKQ PN PSALP VV +A L +++A T N+R F + V Sbjct: 43 AAAGVTEMLVPGATLEESQAAIDLCRKYPTQLFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMVQHIPLQKLVIETDAPYMGFPKCRRYEPSHPKKQYPNVPSALPQVVEAIATALGKTPQEIALITKANARRFLRLSV 289
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A662WGG9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA) HSP 1 Score: 241 bits (616), Expect = 9.730e-72 Identity = 124/248 (50.00%), Postives = 170/248 (68.55%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVL----RRYDALHGLPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKP-KKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336 A+S+GV + +VPGST+++S+ A+EL +Q P +FPTAGVHPYH E+ +A + L L +VR VGECGLDYS GFP+ ELQ WF Q+ LAC+L+KPLFLHER A DF +++ +++D PP +VHCFTG+E+EL Y+ G ++I V G IC+++ GAALRE V+ VPLDRL++ETDAPY+GF CR+ KKQ PN PSALP VV+ +A L +++ + T N+R F Sbjct: 87 AASVGVTEMLVPGSTLEESQRAIELCRQYPTQLFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALREMVRHVPLDRLVLETDAPYMGFPKCRRDEPNDRKKQYPNVPSALPQVVQAVAAALGRSPQEIGKITKANARRF 331
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A075LYL0_PHYCP (TatD related DNase n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A075LYL0_PHYCP) HSP 1 Score: 238 bits (608), Expect = 1.080e-71 Identity = 124/246 (50.41%), Postives = 165/246 (67.07%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSK-PKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336 A+ +GVK+ +VPG+T+++S+ A+EL +Q P +FPTAGVHPY+ E+ + + L ++QVR VGECGLDYS FP AE Q WF Q+ +AC LKKPLFLHER A DF +++ G PP +VHCFTG+E+EL TY+ G ++I V G I + K GAAL+E VK VPL+RL++ETDAPY+GF CR+ S PKKQ PN PSA+P V + +A L EDVA+ T N+R F Sbjct: 4 AAKVGVKEMLVPGATIEESQRAIELCRQHPTKLFPTAGVHPYNARSMPT-EEELNKLQGLMEIDQVRAVGECGLDYSPSFPDAEFQKKWFADQLTMACALKKPLFLHERLAHKDFIQLIDEAKEKAGGYFPPSVVHCFTGNEEELKTYIARGDDWYIGVTGFILK-KQGAALKEMVKHVPLERLVLETDAPYMGFPKCRRVESSDPKKQYPNVPSAMPLVAQAVANALGRSAEDVAKITRANARRF 247
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A075LY60_PHYSO (TatD related DNase n=1 Tax=Phytophthora sojae TaxID=67593 RepID=A0A075LY60_PHYSO) HSP 1 Score: 239 bits (611), Expect = 4.330e-71 Identity = 125/246 (50.81%), Postives = 165/246 (67.07%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGH-SKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336 A ++GVK+ +VPG+T+D+S+ A+EL +Q P +FPTAGVHPY+ ++ + + L L +VR VGECGLDYS FP E Q WF Q+ LAC+LKKPLFLHER A DF +++ A G PP +VHCFTG+E+EL YV G ++I V G IC+ K GAAL+E VK VPL+RLM+ETDAPY+GF CR+ S PKKQ PN PSA+P V + +A L ++VA+ T N+R F Sbjct: 81 AEAVGVKEMLVPGATIDESQRAVELCRQHPTKLFPTAGVHPYNARAMPTQQE-LTTLKGLMELPEVRAVGECGLDYSPSFPEPEFQKKWFAEQLLLACELKKPLFLHERLAHQDFIQLIDEATAKAGGYFPPAVVHCFTGNEEELKAYVARGDDWYIGVTGFICK-KQGAALQEMVKHVPLERLMLETDAPYMGFPKCRRAEKSDPKKQYPNVPSAMPLVAQAVATALGRSPQEVAKITRANARRF 324
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A6G0WS64_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS64_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.470e-70 Identity = 129/260 (49.62%), Postives = 166/260 (63.85%), Query Frame = 2 Query: 566 IQFSATAKKATEGPRVASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKR--VPLDRLMVETDAPYLGFTGCRKGHSKP-KKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336 ++F A E R + V Q +VPG+T+++S+ LELA++ P VFPTAG+HPY+ D +++A LAA VGECGLDYS+GFP AE QL WF Q+ELAC L+KPLFLHER A F + L+ + A LPP VHCFTG E Y++MGF+I + G IC+ GAAL+ +K VPLDRL+VETDAPY+GF CR SK K+Q PN P++LP VV V+A CL + DVA AT N+R F Sbjct: 45 LEFEGQADALIESAR---RLRVTQMLVPGATIEESKQCLELARKYPESVFPTAGLHPYNATK-PFDTDMFSELAALAADSSTVAVGECGLDYSDGFPPAEHQLEWFGPQLELACSLQKPLFLHERLAHEPFLQALKAHKAT--LPPACVHCFTGTADEAKVYLEMGFYIGITGFICKPH-GAALQSMLKEGVVPLDRLVVETDAPYMGFPNCRAFESKAAKRQFPNVPTSLPLVVEVIASCLNMSPVDVALATTHNARRF 297
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A8K1FN21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN21_PYTOL) HSP 1 Score: 236 bits (602), Expect = 2.260e-70 Identity = 124/250 (49.60%), Postives = 162/250 (64.80%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMAD-IATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKK-QTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351 A+S+GV + +VPG+T+D+S + L +Q P +FPTAGVHPYH E L DA + + +AA + V VGECGLDYS FP A+ Q WF Q+ELAC+L+KPLFLHER A DF ++ A PP +VHCFTG E EL YV F+I V G IC++ GAALR+ ++ VPL++L++ETDAPY+GF CR S KK Q PN PSALP V V+A+ L +D+AQ T N+R F + V Sbjct: 34 AASVGVTEMLVPGATLDESEATIALCRQHPTNLFPTAGVHPYHAEA--LPTDAELERLRGMAAQQDVLAVGECGLDYSPSFPDAKWQKAWFTVQLELACELQKPLFLHERLAHADFLALISECQAKFNGYFPPAVVHCFTGTEDELLEYVRRDFYIGVTGYICKKDRGAALRDMLRHVPLNKLVIETDAPYMGFPKCRSVESADKKKQYPNVPSALPQVCEVVAQVLGKTPQDIAQITRANARRFLRLGV 281
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A024GTS9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTS9_9STRA) HSP 1 Score: 235 bits (600), Expect = 3.160e-70 Identity = 120/244 (49.18%), Postives = 160/244 (65.57%), Query Frame = 2 Query: 614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRY-DALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHS--KPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336 A S+GV +VPG+T+D S+ A+EL +Q P VFPTAGVHP+H + ED + + L++ QV VGECGLDYSEGFPS ELQ W E Q+ +AC ++KPLF+HER AF DF E++ + + P VHCFTG E EL Y+ F+I + G IC+ K GA+LR+ V ++P +RL++ETDAPY+GF CR+ + + KKQ PN PSALP V +A LE+ VAQ T N+R F Sbjct: 28 AQSVGVTSMLVPGTTLDTSKDAIELGRQYPEYVFPTAGVHPFHADTAPS-EDELNQLRELSS--QVCAVGECGLDYSEGFPSPELQKAWLEAQIRIACAIQKPLFMHERRAFVDFMEIITKVRKEVSEFPNVAVHCFTGTEVELQAYIKSDFYIGITGFICK-KHGASLRDLVTQIPKERLLIETDAPYMGFKQCRRNETDYRAKKQYPNVPSALPLVAETVAVMLEMSVAQVAQLTVRNARRF 267 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig984.18788.1 >prot_L-elsbetiae_contig984.18788.1 ID=prot_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp MGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAback to top mRNA from alignment at L-elsbetiae_contig984:24026..28023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig984.18788.1 ID=mRNA_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3998bp|location=Sequence derived from alignment at L-elsbetiae_contig984:24026..28023- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig984:24026..28023- >mRNA_L-elsbetiae_contig984.18788.1 ID=mRNA_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig984:24026..28023- (Laminarionema elsbetiae ELsaHSoW15)back to top |