mRNA_L-elsbetiae_contig984.18788.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig984.18788.1
Unique NamemRNA_L-elsbetiae_contig984.18788.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: D7FIZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 6.970e-151
Identity = 211/249 (84.74%), Postives = 230/249 (92.37%), Query Frame = 2
Query:  608 RVASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEVI 1354
            ++ASS+GVKQFVVPGSTV+DSRG+LELA++KPNVVF TAGVHPYHV+GCG LEDAMA IATLAA E+ RCVGECGLDYSEGFP+AELQLPWFERQVELACKLKKPLFLHERAAF DF+EVLRRYDA HGLPPCLVHCFTG E+EL  Y+DMGFF+SVAGGICREKSGAALR AVKR+PLDRLMVETDAPYLGF+GCRKGH KPKKQ PN PSALPAVVRVLAECL LPFE+VAQAT +NSR FFGM  +
Sbjct:   97 QIASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVLAECLGLPFEEVAQATLQNSRQFFGMATL 345          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A835Z870_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA)

HSP 1 Score: 291 bits (745), Expect = 3.880e-91
Identity = 142/246 (57.72%), Postives = 182/246 (73.98%), Query Frame = 2
Query:  611 VASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALH-GLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGM 1345
            +A  +GV+Q VVPGS + DS+ AL+LA++ P +++PTAG+HPY V+ CG LE AM+ +A L A     CVGECGLD+SEGFP  ELQLP+FERQV+LA + +KPLFLHER A   F +VLR  +A   GLPPCLVHCFTG   EL+ Y+ MGF+I V G + ++  G  LR  +++VPLDRLMVETDAPYLGF GCRKGHS+PK+Q PN PSALP VV+ +A+ + +   DVA  +  N+R FFGM
Sbjct:   72 MARDVGVRQMVVPGSDLADSKAALDLARKYPGILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLRGCLQQVPLDRLMVETDAPYLGFPGCRKGHSQPKRQYPNVPSALPLVVQAVADAMGVSALDVAAHSTRNARKFFGM 317          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A5D6YB90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB90_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.050e-73
Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCR-KGHSKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351
            A++ GV + +VPG+T+D+SR AL L++  P+ +F TAGVHPY+        + + ++  LA L + R VGECGLDYS GFP AE Q  WF  Q+ELAC+L++PLFLHER A  DF   +    A  G   PP +VHCFTG E+EL  YV  GF+I V G +CR++ GA LRE ++ VPL RL++ETDAPY+GF  CR +  + PKKQ PN PSALP V   +A  L L  ++VA AT  N+R F  + V
Sbjct:   95 AAAAGVSEMLVPGATLDESRAALTLSRDHPHTLFATAGVHPYNAHAAPETHE-LEELEALAVLPECRAVGECGLDYSPGFPPAEPQREWFRAQLELACRLRQPLFLHERLAHDDFVATVASCQARFGDAFPPAVVHCFTGTERELRAYVARGFYIGVTGFVCRKELGAPLREMLRLVPLQRLVIETDAPYMGFPKCRGREPTDPKKQYPNVPSALPLVAETVAAALGLTAQEVATATRANARRFLRLSV 342          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: K3WCX9_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD)

HSP 1 Score: 242 bits (618), Expect = 1.230e-72
Identity = 118/248 (47.58%), Postives = 169/248 (68.15%), Query Frame = 2
Query:  617 SSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGH-SKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351
            ++ GV + +VPG+T+++S+ A++L ++ P  +FPTAGVHPYH       E+ +A ++ LA LE+ R VGECGLDYS  FP A+LQ  WF+ Q++LAC+L+KPLFLHER A  DF  ++++         PP +VHCFTG+E+EL  YV  GF+I + G IC+++ GA+LR  V+ +PL +L++ETDAPY+GF  CR+   S PKKQ PN PSALP VV  +A  L    +++A  T  N+R F  + V
Sbjct:   43 AAAGVTEMLVPGATLEESQAAIDLCRKYPTQLFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMVQHIPLQKLVIETDAPYMGFPKCRRYEPSHPKKQYPNVPSALPQVVEAIATALGKTPQEIALITKANARRFLRLSV 289          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A662WGG9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA)

HSP 1 Score: 241 bits (616), Expect = 9.730e-72
Identity = 124/248 (50.00%), Postives = 170/248 (68.55%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVL----RRYDALHGLPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKP-KKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336
            A+S+GV + +VPGST+++S+ A+EL +Q P  +FPTAGVHPYH       E+ +A +  L  L +VR VGECGLDYS GFP+ ELQ  WF  Q+ LAC+L+KPLFLHER A  DF +++    +++D     PP +VHCFTG+E+EL  Y+  G  ++I V G IC+++ GAALRE V+ VPLDRL++ETDAPY+GF  CR+      KKQ PN PSALP VV+ +A  L    +++ + T  N+R F
Sbjct:   87 AASVGVTEMLVPGSTLEESQRAIELCRQYPTQLFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALREMVRHVPLDRLVLETDAPYMGFPKCRRDEPNDRKKQYPNVPSALPQVVQAVAAALGRSPQEIGKITKANARRF 331          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A075LYL0_PHYCP (TatD related DNase n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A075LYL0_PHYCP)

HSP 1 Score: 238 bits (608), Expect = 1.080e-71
Identity = 124/246 (50.41%), Postives = 165/246 (67.07%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSK-PKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336
            A+ +GVK+ +VPG+T+++S+ A+EL +Q P  +FPTAGVHPY+       E+ +  +  L  ++QVR VGECGLDYS  FP AE Q  WF  Q+ +AC LKKPLFLHER A  DF +++       G   PP +VHCFTG+E+EL TY+  G  ++I V G I + K GAAL+E VK VPL+RL++ETDAPY+GF  CR+  S  PKKQ PN PSA+P V + +A  L    EDVA+ T  N+R F
Sbjct:    4 AAKVGVKEMLVPGATIEESQRAIELCRQHPTKLFPTAGVHPYNARSMPT-EEELNKLQGLMEIDQVRAVGECGLDYSPSFPDAEFQKKWFADQLTMACALKKPLFLHERLAHKDFIQLIDEAKEKAGGYFPPSVVHCFTGNEEELKTYIARGDDWYIGVTGFILK-KQGAALKEMVKHVPLERLVLETDAPYMGFPKCRRVESSDPKKQYPNVPSAMPLVAQAVANALGRSAEDVAKITRANARRF 247          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A075LY60_PHYSO (TatD related DNase n=1 Tax=Phytophthora sojae TaxID=67593 RepID=A0A075LY60_PHYSO)

HSP 1 Score: 239 bits (611), Expect = 4.330e-71
Identity = 125/246 (50.81%), Postives = 165/246 (67.07%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMG--FFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGH-SKPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336
            A ++GVK+ +VPG+T+D+S+ A+EL +Q P  +FPTAGVHPY+       ++ +  +  L  L +VR VGECGLDYS  FP  E Q  WF  Q+ LAC+LKKPLFLHER A  DF +++    A  G   PP +VHCFTG+E+EL  YV  G  ++I V G IC+ K GAAL+E VK VPL+RLM+ETDAPY+GF  CR+   S PKKQ PN PSA+P V + +A  L    ++VA+ T  N+R F
Sbjct:   81 AEAVGVKEMLVPGATIDESQRAVELCRQHPTKLFPTAGVHPYNARAMPTQQE-LTTLKGLMELPEVRAVGECGLDYSPSFPEPEFQKKWFAEQLLLACELKKPLFLHERLAHQDFIQLIDEATAKAGGYFPPAVVHCFTGNEEELKAYVARGDDWYIGVTGFICK-KQGAALQEMVKHVPLERLMLETDAPYMGFPKCRRAEKSDPKKQYPNVPSAMPLVAQAVATALGRSPQEVAKITRANARRF 324          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A6G0WS64_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS64_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.470e-70
Identity = 129/260 (49.62%), Postives = 166/260 (63.85%), Query Frame = 2
Query:  566 IQFSATAKKATEGPRVASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKR--VPLDRLMVETDAPYLGFTGCRKGHSKP-KKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336
            ++F   A    E  R    + V Q +VPG+T+++S+  LELA++ P  VFPTAG+HPY+        D  +++A LAA      VGECGLDYS+GFP AE QL WF  Q+ELAC L+KPLFLHER A   F + L+ + A   LPP  VHCFTG   E   Y++MGF+I + G IC+   GAAL+  +K   VPLDRL+VETDAPY+GF  CR   SK  K+Q PN P++LP VV V+A CL +   DVA AT  N+R F
Sbjct:   45 LEFEGQADALIESAR---RLRVTQMLVPGATIEESKQCLELARKYPESVFPTAGLHPYNATK-PFDTDMFSELAALAADSSTVAVGECGLDYSDGFPPAEHQLEWFGPQLELACSLQKPLFLHERLAHEPFLQALKAHKAT--LPPACVHCFTGTADEAKVYLEMGFYIGITGFICKPH-GAALQSMLKEGVVPLDRLVVETDAPYMGFPNCRAFESKAAKRQFPNVPTSLPLVVEVIASCLNMSPVDVALATTHNARRF 297          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A8K1FN21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN21_PYTOL)

HSP 1 Score: 236 bits (602), Expect = 2.260e-70
Identity = 124/250 (49.60%), Postives = 162/250 (64.80%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMAD-IATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRYDALHG--LPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKK-QTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEV 1351
            A+S+GV + +VPG+T+D+S   + L +Q P  +FPTAGVHPYH E   L  DA  + +  +AA + V  VGECGLDYS  FP A+ Q  WF  Q+ELAC+L+KPLFLHER A  DF  ++    A      PP +VHCFTG E EL  YV   F+I V G IC++  GAALR+ ++ VPL++L++ETDAPY+GF  CR   S  KK Q PN PSALP V  V+A+ L    +D+AQ T  N+R F  + V
Sbjct:   34 AASVGVTEMLVPGATLDESEATIALCRQHPTNLFPTAGVHPYHAEA--LPTDAELERLRGMAAQQDVLAVGECGLDYSPSFPDAKWQKAWFTVQLELACELQKPLFLHERLAHADFLALISECQAKFNGYFPPAVVHCFTGTEDELLEYVRRDFYIGVTGYICKKDRGAALRDMLRHVPLNKLVIETDAPYMGFPKCRSVESADKKKQYPNVPSALPQVCEVVAQVLGKTPQDIAQITRANARRFLRLGV 281          
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Match: A0A024GTS9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTS9_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.160e-70
Identity = 120/244 (49.18%), Postives = 160/244 (65.57%), Query Frame = 2
Query:  614 ASSMGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDAMADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKPLFLHERAAFGDFAEVLRRY-DALHGLPPCLVHCFTGDEKELATYVDMGFFISVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHS--KPKKQTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAF 1336
            A S+GV   +VPG+T+D S+ A+EL +Q P  VFPTAGVHP+H +     ED +  +  L++  QV  VGECGLDYSEGFPS ELQ  W E Q+ +AC ++KPLF+HER AF DF E++ +    +   P   VHCFTG E EL  Y+   F+I + G IC+ K GA+LR+ V ++P +RL++ETDAPY+GF  CR+  +  + KKQ PN PSALP V   +A  LE+    VAQ T  N+R F
Sbjct:   28 AQSVGVTSMLVPGTTLDTSKDAIELGRQYPEYVFPTAGVHPFHADTAPS-EDELNQLRELSS--QVCAVGECGLDYSEGFPSPELQKAWLEAQIRIACAIQKPLFMHERRAFVDFMEIITKVRKEVSEFPNVAVHCFTGTEVELQAYIKSDFYIGITGFICK-KHGASLRDLVTQIPKERLLIETDAPYMGFKQCRRNETDYRAKKQYPNVPSALPLVAETVAVMLEMSVAQVAQLTVRNARRF 267          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig984.18788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ5_ECTSI6.970e-15184.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z870_9STRA3.880e-9157.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6YB90_9STRA1.050e-7349.80Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WCX9_GLOUD1.230e-7247.58Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
A0A662WGG9_9STRA9.730e-7250.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A075LYL0_PHYCP1.080e-7150.41TatD related DNase n=1 Tax=Phytophthora capsici Ta... [more]
A0A075LY60_PHYSO4.330e-7150.81TatD related DNase n=1 Tax=Phytophthora sojae TaxI... [more]
A0A6G0WS64_9STRA1.470e-7049.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1FN21_PYTOL2.260e-7049.60Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GTS9_9STRA3.160e-7049.18Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig984contigL-elsbetiae_contig984:24026..28023 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.7
Seed ortholog evalue4.6e-121
Seed eggNOG ortholog2880.D7FIZ5
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0084@1,KOG3020@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionTatD family
Ec32 orthologEc-07_005020.1
Exons9
Model size1636
Cds size735
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817045.1995711-UTR-L-elsbetiae_contig984:24025..243041622817045.1995711-UTR-L-elsbetiae_contig984:24025..24304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 24026..24304 -
1691684005.8182073-UTR-L-elsbetiae_contig984:24025..243041691684005.8182073-UTR-L-elsbetiae_contig984:24025..24304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 24026..24304 -
1622817045.30362-UTR-L-elsbetiae_contig984:27264..272761622817045.30362-UTR-L-elsbetiae_contig984:27264..27276Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 27265..27276 -
1691684005.9416687-UTR-L-elsbetiae_contig984:27264..272761691684005.9416687-UTR-L-elsbetiae_contig984:27264..27276Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 27265..27276 -
1622817045.3152769-UTR-L-elsbetiae_contig984:27413..280231622817045.3152769-UTR-L-elsbetiae_contig984:27413..28023Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 27414..28023 -
1691684005.9523113-UTR-L-elsbetiae_contig984:27413..280231691684005.9523113-UTR-L-elsbetiae_contig984:27413..28023Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig984 27414..28023 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817045.211386-CDS-L-elsbetiae_contig984:24304..244361622817045.211386-CDS-L-elsbetiae_contig984:24304..24436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 24305..24436 -
1691684005.8355045-CDS-L-elsbetiae_contig984:24304..244361691684005.8355045-CDS-L-elsbetiae_contig984:24304..24436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 24305..24436 -
1622817045.2214613-CDS-L-elsbetiae_contig984:24788..248871622817045.2214613-CDS-L-elsbetiae_contig984:24788..24887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 24789..24887 -
1691684005.8477058-CDS-L-elsbetiae_contig984:24788..248871691684005.8477058-CDS-L-elsbetiae_contig984:24788..24887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 24789..24887 -
1622817045.2334495-CDS-L-elsbetiae_contig984:25134..252241622817045.2334495-CDS-L-elsbetiae_contig984:25134..25224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25135..25224 -
1691684005.860223-CDS-L-elsbetiae_contig984:25134..252241691684005.860223-CDS-L-elsbetiae_contig984:25134..25224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25135..25224 -
1622817045.2457159-CDS-L-elsbetiae_contig984:25373..254451622817045.2457159-CDS-L-elsbetiae_contig984:25373..25445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25374..25445 -
1691684005.8722806-CDS-L-elsbetiae_contig984:25373..254451691684005.8722806-CDS-L-elsbetiae_contig984:25373..25445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25374..25445 -
1622817045.2578907-CDS-L-elsbetiae_contig984:25671..257251622817045.2578907-CDS-L-elsbetiae_contig984:25671..25725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25672..25725 -
1691684005.8814964-CDS-L-elsbetiae_contig984:25671..257251691684005.8814964-CDS-L-elsbetiae_contig984:25671..25725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25672..25725 -
1622817045.26883-CDS-L-elsbetiae_contig984:25936..260371622817045.26883-CDS-L-elsbetiae_contig984:25936..26037Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25937..26037 -
1691684005.9019535-CDS-L-elsbetiae_contig984:25936..260371691684005.9019535-CDS-L-elsbetiae_contig984:25936..26037Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 25937..26037 -
1622817045.2790005-CDS-L-elsbetiae_contig984:26698..268011622817045.2790005-CDS-L-elsbetiae_contig984:26698..26801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 26699..26801 -
1691684005.915685-CDS-L-elsbetiae_contig984:26698..268011691684005.915685-CDS-L-elsbetiae_contig984:26698..26801Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 26699..26801 -
1622817045.2912414-CDS-L-elsbetiae_contig984:27180..272641622817045.2912414-CDS-L-elsbetiae_contig984:27180..27264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 27181..27264 -
1691684005.9286063-CDS-L-elsbetiae_contig984:27180..272641691684005.9286063-CDS-L-elsbetiae_contig984:27180..27264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig984 27181..27264 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig984.18788.1prot_L-elsbetiae_contig984.18788.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig984 24305..27264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig984.18788.1

>prot_L-elsbetiae_contig984.18788.1 ID=prot_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
MGVKQFVVPGSTVDDSRGALELAQQKPNVVFPTAGVHPYHVEGCGLLEDA
MADIATLAALEQVRCVGECGLDYSEGFPSAELQLPWFERQVELACKLKKP
LFLHERAAFGDFAEVLRRYDALHGLPPCLVHCFTGDEKELATYVDMGFFI
SVAGGICREKSGAALREAVKRVPLDRLMVETDAPYLGFTGCRKGHSKPKK
QTPNCPSALPAVVRVLAECLELPFEDVAQATGENSRAFFGMEVI*
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mRNA from alignment at L-elsbetiae_contig984:24026..28023-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig984.18788.1 ID=mRNA_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3998bp|location=Sequence derived from alignment at L-elsbetiae_contig984:24026..28023- (Laminarionema elsbetiae ELsaHSoW15)
CCTACATACATACATACATGTGAGTGTACTTGGGTCTCAGGACAAGTCGC CCGATTAATCCACAGACCTTCTCTGTGGGCTGCTCTTCCTACAAAAAAAA TGCCTTCTTGCTCTGTCAACTCAGCTAACATCTCTAGCTGTCATTTCTCC GCTGGAGATGGGCAGGAGCAATCGATCAAGAGGACCTTCGCACGTCGAAG GCTATGGGGGCGTAAACAAACTCTCGTTTTCACGAGCGCCCTTAAATATG CCTCTTTCCCAGCCCAAAATACTCGAAGCGAGCTCGGTACGTTTTATTTA GCCCCCGAAGTGTTGACAACGGCGTTTTTGGCCGAACGACACGACGGGCG GCTGGCTCCCAAAGCCAATCCACACAGCTGCCGGCCGATCTGCGAAGGGC ATCCGGTTGGCGGTCGAGGTGGTCAATGTCCTTGGAACAAAAGCAGCAAC GAAGGAGGGAGAGTGCTGTGGTTCACGGGAGTTGAAGTGATAGAACTGAC CTTCTCGCACAAGCACCAACCAAGGCGGGGCAGACCACCTACGCGCTGAG AACGAGCGGCTGCGGATTCAGTTCAGCGCAACCGCAAAAAAAGCCACCGA GGGGCCGCGGGTGAGGGGGGACGGGGGCAGCTTGTATAGCAGGAGAGGTA TGCTTTATATTTCGCCCTCTCTCCTTATTTATTTTGTGAGCGATGCGTTG ACAAATTAGCACATGATCCCCAATGTCATTGTTTGTTTGCCACACAGGTG GCCTCTTCTATGGGAGTGAAGCAGTTTGTGGTACCTGGCAGTACTGTCGA CGACAGCCGTGGTGCTTTGGAACTGGCACAACAAAAGCCGAACGTAAGTG CGGCCTCAAGCGGCAAAATGACTACAGGCAGTGTACGACATAAAACCACG TGTAGTTATGTTAGACTTGCGATGCCTGCCTGTTGGTGTCTACACCTATA TAGATCGGCGAGGAAGTTGTCATCGTTCTGTTCTTTCGACAGATATTCGA TGCGCACTTTTGTTGTTCTTGTTGCGGCGAAATGCTATTATGTAAGCCTT CAGGAGATTAGAAGGGCCTGTTCCGTTGTTGCATGCGTGCATCCAGCGGC TAGTGTCATTTGCGCTGTTGCCATGCATATGCAGTACAGAGTCAACAAGC GTATTTATCGCGCCACCTTGAACCATTGTAATCCCGGCATGTGTTCCTTG CTCGTCGAACGGTTTGCCAAAGGTTGTGTTCCCCACTGCTGGTGTTCACC CGTATCACGTGGAGGGATGCGGCTTGCTTGAGGATGCAATGGCGGATATA GCTACTCTTGCAGCTTTGGAGCAAGGTGATCAACGCTTGCGAATCAAGAA GCGTTTTTCTCATGCACTCACCCTTTGGGATTGTTTTGGATCGCTTAGTT TGGCGGTCTCGTCCGTTGTTTTAGGGCCAGCTTTTACCCTACGCACATAC GGCCCAAGAGAAGGAAGACACGGTTACTTCTACCACCATGACGCAGATAG AGCATTCGTCTGTGCGCAACCGCTCATCGCACACCATTTCACTCCTTTAT TTTCTGCCGGAAACACCACTAAATTTGATTTTTTGAGGTTGCCTCTGGAG ATGAGAAAACCCCTGCCCGCGCTTTGTTTCCCGTGGATCTTTACTGGCTC TGCGTGTTCTCCGGGGGGTAATGTGTGTATTTTGGCATCGTTCTGTACTG TGTTGATGCCCATGGAGCCCACGTGTGCGGGAAGATCAATGTTGCTATAA TACCGTAATTTGTGTGTGCTTGCGTTTGTGGGGGATACGTATGAGCTCAG CGTTTTCTTTGGCCTTCCCGGGGGGGGTATATCCTTCCGAGCCGATTGTC GTTTTTTTTCTGCACACGCCTCCTCTCTTTCGCAAGTTGACGTGACAGCA CATGGATCATCCTTGCATCTTCCACACTCCCTGACGCAGCCTCTCGACGC GACCTGATCCGCTTACACCTCACGTTTCATAAATAGTCCGCTGCGTGGGA GAATGCGGATTGGATTACTCAGAGGGATTTCCTTCGGCTGAATTGCAGCT CCCGTGGTTTGAGAGACAAGTCGAGCTTGCGTGCAAGGTGAGCGACGATA CAAAGCGGATGCGTAGAGCGTTTGCAACCTTCTTCGAACTTACGCGCGTG ACATACTTAGGCATAATTTTTTATGTTTGTCCCTTGCGCCAGTAGGAAGA CTGCTGGCTTCTGGCCAGTTTTTCCACCACTATTTTGTTGCAGCTGACGA TTTTGCAGCAGTTAATGCCCTTTTTCTTTTCACGACCGTCGATTCCAGCT GAAGAAGCCCCTGTTCCTTCACGAGCGTGCGGCATTCGGTGACTTTGCTG AGGTAAGCGAGTCGTCTCAACCACCGCCACGATAGTGTTGCATCTTTATG GGGTATCTACTAGCTGTCAGATTCTATACACCATTTCGATATGAACATCC GACTTGGAGGACGAAATCAGATGAGGTGCCCGGGGTCGCATCCAGTTGCT CGCAACCAACCCGCGGCTGAGAATCGTTCATTGCGTTACATTGTGCTGAC GGACCTTAACCTGGGATTCCCGCGACAGGTCTTACGGCGATACGACGCCT TGCACGGTTTGCCTCCGTGCTTGGTGCATTGTTTTACAGGAGACGAAAAG GTGAGGAGATGAGTAAACAAACTTCCGGGTAGCCATCAGCCTGCACCCCC CCCCCACGGCAGCTGCATGTGTTGATTCTCTTTTTGGTTGGCTCGCTAAC TGACTCGTTGTTGACATCCGTTCTTCACCAAACCGCGCCACTCTGAAAGG AGCTGGCTACATACGTTGATATGGGTTTCTTCATAAGCGTTGCCGGGGGC ATCTGCCGGGAAAAGAGCGGCGCGGCACTAAGAGAAGCGGTGAGCTAACT CCGTGGAACATCACTCTATCGATTCCCCGCGGCACCTTTTTTTCGCATTA CGCTTTGCTGGGTTGCGAAACTGCATTGCGTCGAGTTTACGTTGGTTTTC ATGCTTCGTGTTTCACATTAAACACAACAGTTGGGTTGCCAACGGATTTC CTTTGTTTGCACCACGTGCCTCTCTACATCTCTTGGGGTTGTATCGCTCG TCATAAATAGCTTGGCTTATTCCGCGCGAACTGCAGGTGAAACGCGTTCC ATTGGACAGGCTCATGGTAGAAACGGATGCACCATACCTTGGCTTCACCG GATGCCGAAAAGGACACAGCAAACCTAAAAAACAGGTATGGGTGTGCGAA GTACGGTTGTGCGCGGATCGTAACCCTACATGACTTGGATAGATGCGTGA ACATGTCGAGTTCCCGCGATTGGTGAAAACCTTCCCGTGCTCTCCATACT TTTTCAATGTTCTCTGTCCGAGCTTTTTTCAATGTTCTCTGTCCGTGCCA TGGGATACACACACCGTCGACTTGAGTCGGCGCCGGATGGGTGTGGGTAG GCGTCGCGATGACAACCAGCGAGAAGACACAAATGGAATCATGAGGTGTT CCATTCGCAAAAGCGCTGGGTACCAAATTAACCCCTGCCAATTTTTGCTG TTTTATTTGTGTGCCCTGTTCTTCTCTTCCGCCGCAGACCCCGAATTGCC CGTCGGCGCTGCCAGCGGTGGTCAGAGTTCTGGCGGAATGCCTTGAGTTG CCGTTTGAAGATGTCGCACAGGCAACGGGCGAGAACTCTCGAGCATTTTT CGGGATGGAAGTAATTTAGACCGCAAGGGCAACGGGGAGGACTAGCGAGG TGTATTGGGGCGTTATTTGGTCCCCCTATCTAGCTAAGAGGAATTGGGGA CGCTGAAGAAACGTCGCGTTCGCTCGCACCGGCGATGTAACTGACCTTTT TGCGTAGCGGTGAATGACCGCGGCGTTTTGGACTGGTCGTGCAACGTCTG CTCGACATTTTGTCATTTACAGTTAGTTGTATATGCTGGCCAAGGAATTA AGTGTAACTGACGAAACGGACCGGACCGGAATAGAACACAAGCCGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig984:24026..28023-

>mRNA_L-elsbetiae_contig984.18788.1 ID=mRNA_L-elsbetiae_contig984.18788.1|Name=mRNA_L-elsbetiae_contig984.18788.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig984:24026..28023- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGAGTGAAGCAGTTTGTGGTACCTGGCAGTACTGTCGACGACAGCCG
TGGTGCTTTGGAACTGGCACAACAAAAGCCGAACATGGGAGTGAAGCAGT
TTGTGGTACCTGGCAGTACTGTCGACGACAGCCGTGGTGCTTTGGAACTG
GCACAACAAAAGCCGAACGTTGTGTTCCCCACTGCTGGTGTTCACCCGTA
TCACGTGGAGGGATGCGGCTTGCTTGAGGATGCAATGGCGGATATAGCTA
CTCTTGCAGCTTTGGAGCAAGGTTGTGTTCCCCACTGCTGGTGTTCACCC
GTATCACGTGGAGGGATGCGGCTTGCTTGAGGATGCAATGGCGGATATAG
CTACTCTTGCAGCTTTGGAGCAAGTCCGCTGCGTGGGAGAATGCGGATTG
GATTACTCAGAGGGATTTCCTTCGGCTGAATTGCAGCTCCCGTGGTTTGA
GAGACAAGTCGAGCTTGCGTGCAAGTCCGCTGCGTGGGAGAATGCGGATT
GGATTACTCAGAGGGATTTCCTTCGGCTGAATTGCAGCTCCCGTGGTTTG
AGAGACAAGTCGAGCTTGCGTGCAAGCTGAAGAAGCCCCTGTTCCTTCAC
GAGCGTGCGGCATTCGGTGACTTTGCTGAGCTGAAGAAGCCCCTGTTCCT
TCACGAGCGTGCGGCATTCGGTGACTTTGCTGAGGTCTTACGGCGATACG
ACGCCTTGCACGGTTTGCCTCCGTGCTTGGTGCATTGTTTTACAGGAGAC
GAAAAGGTCTTACGGCGATACGACGCCTTGCACGGTTTGCCTCCGTGCTT
GGTGCATTGTTTTACAGGAGACGAAAAGGAGCTGGCTACATACGTTGATA
TGGGTTTCTTCATAAGCGTTGCCGGGGGCATCTGCCGGGAAAAGAGCGGC
GCGGCACTAAGAGAAGCGGAGCTGGCTACATACGTTGATATGGGTTTCTT
CATAAGCGTTGCCGGGGGCATCTGCCGGGAAAAGAGCGGCGCGGCACTAA
GAGAAGCGGTGAAACGCGTTCCATTGGACAGGCTCATGGTAGAAACGGAT
GCACCATACCTTGGCTTCACCGGATGCCGAAAAGGACACAGCAAACCTAA
AAAACAGGTGAAACGCGTTCCATTGGACAGGCTCATGGTAGAAACGGATG
CACCATACCTTGGCTTCACCGGATGCCGAAAAGGACACAGCAAACCTAAA
AAACAGACCCCGAATTGCCCGTCGGCGCTGCCAGCGGTGGTCAGAGTTCT
GGCGGAATGCCTTGAGTTGCCGTTTGAAGATGTCGCACAGGCAACGGGCG
AGAACTCTCGAGCATTTTTCGGGATGGAAGTAATTTAGACCCCGAATTGC
CCGTCGGCGCTGCCAGCGGTGGTCAGAGTTCTGGCGGAATGCCTTGAGTT
GCCGTTTGAAGATGTCGCACAGGCAACGGGCGAGAACTCTCGAGCATTTT
TCGGGATGGAAGTAATTTAG
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