mRNA_L-elsbetiae_contig980.18751.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: D7FPR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR7_ECTSI) HSP 1 Score: 125 bits (315), Expect = 6.690e-35 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 1 Query: 4 SGSDGERKKDGVEGSDNEVGEEADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 SGSD KK+G + + GEE DDMLTPAQRRFR+KQLERE +KIRGMV+QTHRERIENFNALLASMTEHNDIPRCSAAGNG Sbjct: 95 SGSDDGAKKEGAGEGNEQAGEEVDDMLTPAQRRFRKKQLEREGKKIRGMVEQTHRERIENFNALLASMTEHNDIPRCSAAGNG 177
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A836CFW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW3_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 6.890e-18 Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 73 DDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 D+ LTPAQ+R++Q++ ++ ++I+ +VK THR+RIE FN+ LASMTEHNDIPR SAAGNG Sbjct: 71 DEFLTPAQKRYKQQKASQDEKRIKAIVKMTHRDRIEEFNSTLASMTEHNDIPRISAAGNG 130
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A835YYZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.230e-16 Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 67 EADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 + D LTPAQ+RF++ QL RE + +R +VK+THR+R+E FN +A +TEHNDIPR SAAGNG Sbjct: 69 DVDSGLTPAQKRFKEAQLARERQVMRELVKKTHRQRVEEFNQKIAKLTEHNDIPRISAAGNG 130
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A7R9VT13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VT13_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.680e-15 Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 13 DGERKKDGVEGSDNEVGEEADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 D E K+ + SD+E +DD +T A+RR + +LERE + + + +Q+HRER+ENF+ L S+TEHNDIPR SAAGNG Sbjct: 39 DEETKRTELPSSDHENAGSSDDDMTEAERRAMKVKLERERKDLEKIARQSHRERVENFSEKLGSLTEHNDIPRVSAAGNG 118
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A2R5GLX7_9STRA (Protein FAM32A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLX7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.370e-13 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 82 LTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 LTPAQRRF KQ ERE +I+ M + THRER++ FN L+ ++EH+DIP+ SAAGNG Sbjct: 307 LTPAQRRFELKQREREAERIKEMTRMTHRERVDAFNEKLSKLSEHHDIPKVSAAGNG 363
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A482S2J5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J5_9ARCH) HSP 1 Score: 68.2 bits (165), Expect = 6.830e-13 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 4 SGSDGERKKDGVEGSDNEVGEEADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 SG + +K +E S + + +D LT AQRRF+++Q E+E +KI+ ++ R+R+E FN L+ +TEHNDIPR SAAGNG Sbjct: 35 SGESSKARKRTIEESADTDSKPSDAHLTEAQRRFKRRQQEKEEKKIKVEASKSFRDRVEEFNYKLSKLTEHNDIPRVSAAGNG 117
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: W7TTM0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTM0_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-12 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 67 EADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 E DD LT QRR K ERE + I+ +V ++HRERI+ FN L+ +TEHNDIPR SAAGNG Sbjct: 59 EKDDGLTETQRRHIAKLKERERQNIKKLVSKSHRERIDEFNQYLSVLTEHNDIPRVSAAGNG 120
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A7S1D8Y5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y5_CYCTE) HSP 1 Score: 67.4 bits (163), Expect = 1.240e-12 Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 19 ERKKDGV--EGSDNEVGEEADD-MLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 E K+DG EG E+ EADD +T A+RR + + +RE++++ +++HR+R+E FN L+ +TEHNDIPR SAAGNG Sbjct: 33 EAKRDGAVKEGKTTEIVAEADDDEMTDAERRALKFKEDRELQELEAAAQKSHRDRVEEFNEKLSKLTEHNDIPRVSAAGNG 113
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: A0A7S2WV15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV15_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.340e-12 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 64 EEADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 E+ + +LT A++R R+K ERE R + +THR+++E FN L+S++EHNDIPR SAAGNG Sbjct: 69 EDPEALLTEAEKRHRKKMRERETEMARSLTAKTHRQKVEEFNDRLSSLSEHNDIPRVSAAGNG 131
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Match: H3HAY7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAY7_PHYRM) HSP 1 Score: 67.4 bits (163), Expect = 1.900e-12 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 22 RKKDGVEGSDNEVGEEADDMLTPAQRRFRQKQLEREVRKIRGMVKQTHRERIENFNALLASMTEHNDIPRCSAAGNG 252 R++D + + +V E DD LTPAQRR + Q +RE +I + +T+RERIE N L S+TEH+D+PR SAAGNG Sbjct: 56 RREDDTKQQNGDVELELDD-LTPAQRRHAEHQKKREQEEIEKVASKTYRERIEELNQYLGSLTEHHDVPRVSAAGNG 131 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig980.18751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig980.18751.1 >prot_L-elsbetiae_contig980.18751.1 ID=prot_L-elsbetiae_contig980.18751.1|Name=mRNA_L-elsbetiae_contig980.18751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp MSGSDGERKKDGVEGSDNEVGEEADDMLTPAQRRFRQKQLEREVRKIRGMback to top mRNA from alignment at L-elsbetiae_contig980:1144..1667+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig980.18751.1 ID=mRNA_L-elsbetiae_contig980.18751.1|Name=mRNA_L-elsbetiae_contig980.18751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=524bp|location=Sequence derived from alignment at L-elsbetiae_contig980:1144..1667+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig980:1144..1667+ >mRNA_L-elsbetiae_contig980.18751.1 ID=mRNA_L-elsbetiae_contig980.18751.1|Name=mRNA_L-elsbetiae_contig980.18751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig980:1144..1667+ (Laminarionema elsbetiae ELsaHSoW15)back to top |