mRNA_L-elsbetiae_contig9770.18728.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9770.18728.1
Unique NamemRNA_L-elsbetiae_contig9770.18728.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A6H5K335_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K335_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 1.970e-160
Identity = 235/287 (81.88%), Postives = 257/287 (89.55%), Query Frame = 1
Query:    1 QFEAPDDLGADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLP-----GKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGGFR 846
            ++EAP+DLG DKLSDDF+PAK+S A GEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPL GAGAV KAP GAGDWEFETGVQCLGGG KLGRFV+RLQLA LP     GKEK+KWEKVG+LESDLCVHDMVS+GDG+Q ++FPAEQ+KLLESL+AQFPERR FFRAFF QA+KE  GGS+AYYLLKLFASRP RWLDRVVV      PAMAHVEIAKRSVSEM+ AM+KTQP+G+DD   AQAALCA+FRSENL P+RVSCAALMGQTSSAWGGLYHPRGGFR
Sbjct:  171 EYEAPEDLGVDKLSDDFEPAKVSTAPGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLAGAGAVVKAPAGAGDWEFETGVQCLGGGDKLGRFVERLQLAFLPADEGSGKEKLKWEKVGRLESDLCVHDMVSVGDGKQTILFPAEQEKLLESLMAQFPERRPFFRAFFGQAQKEKEGGSLAYYLLKLFASRPARWLDRVVVGLLATAPAMAHVEIAKRSVSEMMKAMLKTQPEGNDDLEAAQAALCAMFRSENLAPSRVSCAALMGQTSSAWGGLYHPRGGFR 457          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: W7U1I8_9STRA (Amino_oxidase domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1I8_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.280e-18
Identity = 84/283 (29.68%), Postives = 137/283 (48.41%), Query Frame = 1
Query:   25 GADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFET-GVQCLGG---GGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-----ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGGFR 846
            GA  LS+D    +      ++ DH+V+GSD+GGL+ AALL+R G RVLVLE G  VG            +   E  GV+C  G    G +  + + L+   L G  ++KW ++G  E+D    D+V I +G   V++ A +  L++  +   P     ER G F +      +E +    A+++ +LF+ +   W+  ++           +  +  R+  ++L     T PD           L  +FR+ENL P+ +S AA +  T+ A  GL +P+GGFR
Sbjct:  255 GAPGLSEDARDIRTLLTLPQDVDHIVLGSDVGGLYAAALLARVGHRVLVLEGGETVG------------NCTSELKGVECDWGLLNAGMVHVYDELLKAGALEGAPEVKWSRIGT-EADGHSFDVVKI-EGLGDVVYRAGKQALVDDQVTSAPGPENRERVGTFVSRLQAVAREQS----AFFIGRLFSQQTAGWITTLL--------GQQYGGVGARTAEQVLGV---TLPDYRQLD-----LLRGMFRTENLQPSELSFAAYVSATNHALEGLSYPQGGFR 503          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2D421_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D421_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.290e-17
Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWL 585
            ++ D+VV+GS +GGL+CAALL+R GRRV+VLEQ  +  AG      E  G +EF+TG+  +G   ++ ++   L L    G+  ++WEK+G+ ES   V+D V +G       F + +   +E L+A+FP+ R     +    +K      + Y+  KLFA +P +WL
Sbjct:   72 KDIDYVVIGSGMGGLYCAALLARTGRRVVVLEQHYV--AGGCTHTFEDKG-YEFDTGLHYVG---RIEKYKNLLDLVSGGGRS-VEWEKMGEAESGH-VYDEVKLGS-DPGHKFRSGEKSYVEDLVAKFPDEREGIEEYVRLCKKANKAADL-YFFAKLFA-KPIQWL 228          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2V6Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Y3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.690e-16
Identity = 86/304 (28.29%), Postives = 128/304 (42.11%), Query Frame = 1
Query:   31 DKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLP-----------------------------GKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKR-SVSEMLNA----MMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840
            D L++ F  AK  A AG   DH+V+GSDL GL+ AALLSR G+RV+VLE GPLVG G + K       W  E GVQ +G   K    +  +Q + LP                                 ++W  +G +E+     D+V +G     ++  A      E L+  FP+ R       AQ E  +   S  Y+L ++       +    V  ++ A      + +  R S ++ L A     ++ Q  GS  +GGA            L P+ VS AA +        G ++P+GG
Sbjct:  185 DLLAERFSLAK--AEAGGLIDHIVIGSDLEGLYTAALLSRLGQRVVVLESGPLVGGGRLVKQRHNNVVWTAECGVQTVGAVEKTIGMLAAVQASELPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXSDLDLQWFPLGTMENGFAF-DLVDLGPEHATLVCRAGTAAQTEDLITLFPDDRKNILGAIAQVES-LHEESALYFLTRMLPKETAEYSKSFVAPSWQAAATQPAMNMLSRVSTNQGLYAALWSQLRQQTGGSASAGGA------------LLPSDVSFAAYVACMCKRQHGQWYPKGG 472          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2R6Z0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.520e-15
Identity = 82/259 (31.66%), Postives = 123/259 (47.49%), Query Frame = 1
Query:   82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAK--RSVSEMLNAMMKTQPDGSDDSGGAQAALC----ALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840
            E  D VV+GSDLG LF AA L RCG+RVLVLE G     G+V +     G  EF TG QCL G  K+  +   L+ A  P ++ + W +VG+ ES   VH  VS+ DG   +++    D  LE ++++  +R     AF   A++  AG  M +++                       P      IAK  R  ++   A   + P   +        LC    +L++ ENL+PA ++ AAL+   ++   G ++P GG
Sbjct:  214 EGLDFVVLGSDLGALFTAAALGRCGKRVLVLEPGEAA-TGSVVRV----GTTEFVTGDQCLSG--KVESYFNMLK-ALTPPEQAVDWARVGKAESGF-VHSAVSV-DGMDPLLWRTGVDAFLEDMVSKGADRT-MAGAFLLSAQRVAAG--MRWWMCSKL-------------------PEADQAAIAKNLRGQNDQYLAAWAS-PARVESLARHDPLLCFLLFSLWQKENLSPAAINHAALVQSIATIVEGKWYPVGG 439          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A9UNR2_MONBE (Amino_oxidase domain-containing protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UNR2_MONBE)

HSP 1 Score: 76.6 bits (187), Expect = 4.640e-12
Identity = 67/206 (32.52%), Postives = 108/206 (52.43%), Query Frame = 1
Query:   82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLC-VHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWL----DRVVVAAFVATPAMAHVEIAKRSVS--EMLNAM 678
            ++ D ++VGS +G L CAA+LSR G+R LVLEQ  + G    A   +G   +EF+TG+  +G         KR +   L  +  ++W+++G+L  D+   +D + IGD  ++    A  D  +E+L   FPE R   R + A+   E +  S+ ++ LK+  +RP RWL    +R+    F        +E+AK   S  E+L AM
Sbjct:   71 KDIDVILVGSGIGSLSCAAMLSRAGKRCLVLEQHHIAGGATHAFTSKG---FEFDTGIHYIG------NIHKRQKYFDLMTETPLEWDRMGRLPWDIEEAYDELRIGD--KSYFLSAGIDNYVEALAKHFPEERDTIRRW-AECCIEASNKSL-FFGLKI--ARP-RWLARLLNRLTGQTFFKNTQRTAMEVAKEFTSNPELLAAM 260          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: F2ULW0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2ULW0_SALR5)

HSP 1 Score: 73.6 bits (179), Expect = 5.030e-11
Identity = 73/258 (28.29%), Postives = 114/258 (44.19%), Query Frame = 1
Query:   82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLC-VHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVV----AAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840
            ++ D +++GS +  L    LLSRCGRRVLVLEQ  + G         G   +EF+TGV  +G         +R  +  L  + KI+W+ +G+   D+  V+D ++IGD    +  PA +   +++L  +FP  R     +        A     Y+ LK+   RP  WL R+++     AF     M  +E A+ SV+               D+   QA L   F      P++ S        +    G Y+PRGG
Sbjct:   78 KDIDVIIIGSGISALTLGGLLSRCGRRVLVLEQHYIAGGATHMFEERG---YEFDTGVHYIG------NVSRRQPILDLVSEGKIEWDLMGETPQDIPKVYDEIAIGDHVYGL--PAGRQAFIDTLAKRFPSERAGIEKWVQMCRH--ASRQDQYFTLKVV--RPA-WLARLLLRFMGGAFYKVFNMTALEAAQ-SVT---------------DNKELQAVLLGQFGDHGQTPSKASFFMHASVVNHYIRGGYYPRGG 303          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2S3F8_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S3F8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.420e-11
Identity = 68/238 (28.57%), Postives = 108/238 (45.38%), Query Frame = 1
Query:   67 SAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVS 777
            S    +++D VV+GS +GGL CAA LSR G++VLVLEQ  + G G      +G  D+ F++G+        + +  + LQLAC    + ++++K+G  ESD C  D V +GD +   +        L  L   FP ER       F +    +   +  + L K+F     +W  ++    F+ T      E +KR+  E+ N ++              A LC L+      P R S
Sbjct:   79 SKVTSQDFDVVVIGSGMGGLCCAASLSRFGKKVLVLEQHDVAGGGTHTFVVDGKSDYNFDSGLHYT-----VPQSGELLQLACGTRDKPVEFDKLG--ESDGCF-DKVVLGDLKDDGLRVKHGQAHLSKLREMFPSERDQKDLDEFLRVANMVNDRAPVWMLSKVF----PKWARQLWKKLFLGT----FTEYSKRTGEEVTNELVSNPK--------LAALLCGLWMDAGSPPYRAS 292          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2S4B8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S4B8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.250e-10
Identity = 68/238 (28.57%), Postives = 108/238 (45.38%), Query Frame = 1
Query:   67 SAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVS 777
            S    +++D VV+GS +GGL CAA LSR G++VLVLEQ  + G G      +G  D+ F++G+        + +  + LQLAC    + ++++K+G  ESD C  D V +GD +   +        L  L   FP ER       F +    +   +  + L K+F     +W  ++    F+ T      E +KR+  E+ N ++              A LC L+      P R S
Sbjct:   79 SKVTSQDFDVVVIGSGMGGLCCAASLSRFGKKVLVLEQHDVAGGGTHTFVVDGKSDYNFDSGLHYT-----VPQSGELLQLACGTRDKPVEFDKLG--ESDGCF-DKVVLGDLKDDGLRVKHGQAHLSKLREMFPSERDQKDLDEFLRVANMVNDRAPVWMLSKVF----PKWARQLWKKLFLGT----FTEYSKRTGEEVTNELVSNPK--------LAALLCGLWMDAGSPPYRAS 292          
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: F0Y7V0_AURAN (GMC_OxRdtase_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7V0_AURAN)

HSP 1 Score: 70.5 bits (171), Expect = 5.310e-10
Identity = 71/252 (28.17%), Postives = 111/252 (44.05%), Query Frame = 1
Query:   85 EYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840
            + D+VVVGS + GL+ AALLSRCG  V+VLEQ  L G G + +  +G   + F+TGV  +G   K G+ +  + L     + ++ W ++G  E D   +D + +GD     +  A +D+ +  L  ++P   G  R + A  +         Y+  KLF     R++ ++V               A  +V E++        D   D     A L     +  L P+  S     G  S   GG Y P GG
Sbjct:   38 DADYVVVGSGVSGLYLAALLSRCGYVVVVLEQHYLAG-GCMHEFADGG--FTFDTGVHYVGRAEKYGKLMDMVSLP----RRRVAWARLGS-ECDGFAYDCLRVGDLPPHAL-RAGEDRFVADLAKRWPAYEGRIRRYVALCKTSNKEADN-YFFGKLF----PRFIQKLVAPRLC----RKFYGFASATVDEVIRG------DCGIDDDDLVATLTGYAGNYGLAPSEASFFVHAGVASHYMGGAYVPVGG 265          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K335_9PHAE1.970e-16081.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7U1I8_9STRA7.280e-1829.68Amino_oxidase domain-containing protein n=3 Tax=Na... [more]
A0A7S2D421_9STRA7.290e-1735.71Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2V6Y3_9STRA8.690e-1628.29Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2R6Z0_9STRA9.520e-1531.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A9UNR2_MONBE4.640e-1232.52Amino_oxidase domain-containing protein n=1 Tax=Mo... [more]
F2ULW0_SALR55.030e-1128.29Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7S2S3F8_9STRA8.420e-1128.57Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S2S4B8_9STRA1.250e-1028.57Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
F0Y7V0_AURAN5.310e-1028.17GMC_OxRdtase_N domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9770contigL-elsbetiae_contig9770:365..7241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score76.3
Seed ortholog evalue2.6e-11
Seed eggNOG ortholog81824.XP_001742506.1
Preferred nameRETSAT
KEGG rclassRC01835
KEGG koko:K09516
KEGG ReactionR07163
KEGG Pathwayko00830,map00830
Hectar predicted targeting categoryother localisation
GOsGO:0001523,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005640,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0009987,GO:0010817,GO:0012505,GO:0016020,GO:0016101,GO:0016491,GO:0016627,GO:0019867,GO:0031090,GO:0031965,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0034308,GO:0034754,GO:0042175,GO:0042445,GO:0042572,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0051786,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0098588,GO:0098805,GO:0098827,GO:1901615
EggNOG free text desc.all-trans-retinol 13,14-reductase activity
EggNOG OGs38GIP@33154,COG1233@1,KOG4254@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_004310.1
EC1.3.99.23
COG Functional cat.H
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size849
Cds size849
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9770.18728.1prot_L-elsbetiae_contig9770.18728.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9770 365..7241 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817039.2910242-CDS-L-elsbetiae_contig9770:364..4421622817039.2910242-CDS-L-elsbetiae_contig9770:364..442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 365..442 -
1691684001.4354575-CDS-L-elsbetiae_contig9770:364..4421691684001.4354575-CDS-L-elsbetiae_contig9770:364..442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 365..442 -
1622817039.304679-CDS-L-elsbetiae_contig9770:1503..16211622817039.304679-CDS-L-elsbetiae_contig9770:1503..1621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 1504..1621 -
1691684001.4477637-CDS-L-elsbetiae_contig9770:1503..16211691684001.4477637-CDS-L-elsbetiae_contig9770:1503..1621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 1504..1621 -
1622817039.3161314-CDS-L-elsbetiae_contig9770:3021..32091622817039.3161314-CDS-L-elsbetiae_contig9770:3021..3209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 3022..3209 -
1691684001.45712-CDS-L-elsbetiae_contig9770:3021..32091691684001.45712-CDS-L-elsbetiae_contig9770:3021..3209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 3022..3209 -
1622817039.328431-CDS-L-elsbetiae_contig9770:4406..45431622817039.328431-CDS-L-elsbetiae_contig9770:4406..4543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 4407..4543 -
1691684001.4659445-CDS-L-elsbetiae_contig9770:4406..45431691684001.4659445-CDS-L-elsbetiae_contig9770:4406..4543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 4407..4543 -
1622817039.3388233-CDS-L-elsbetiae_contig9770:6212..64191622817039.3388233-CDS-L-elsbetiae_contig9770:6212..6419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 6213..6419 -
1691684001.4745162-CDS-L-elsbetiae_contig9770:6212..64191691684001.4745162-CDS-L-elsbetiae_contig9770:6212..6419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 6213..6419 -
1622817039.3487902-CDS-L-elsbetiae_contig9770:7120..72411622817039.3487902-CDS-L-elsbetiae_contig9770:7120..7241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 7121..7241 -
1691684001.4831965-CDS-L-elsbetiae_contig9770:7120..72411691684001.4831965-CDS-L-elsbetiae_contig9770:7120..7241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9770 7121..7241 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9770.18728.1

>prot_L-elsbetiae_contig9770.18728.1 ID=prot_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp
QFEAPDDLGADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSR
CGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKR
LQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLE
SLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVV
AAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRS
ENLNPARVSCAALMGQTSSAWGGLYHPRGGFR*
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mRNA from alignment at L-elsbetiae_contig9770:365..7241-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9770.18728.1 ID=mRNA_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6877bp|location=Sequence derived from alignment at L-elsbetiae_contig9770:365..7241- (Laminarionema elsbetiae ELsaHSoW15)
CAGTTCGAGGCGCCGGATGACCTCGGGGCGGACAAGCTCTCCGACGACTT CGACCCCGCCAAGTTGTCCGCGGCTGCTGGCGAGGAGTACGACCACGTCG TTGTGGGGTCCGACCTTGGAGGTGAGTAGAGCAACTTCTTTCGGCGATTT GTATGTGTGTGTGTGTGTTTTTTTCGGTTACAGATCCTCCCTTTGCTCGG GGTCCCCCAACCAAGGCCTGCCTCGAGTTATGTATGTGGCACAAGTCCAG TTCCTTGAGTAGATTGCGGTAGAGGTTGCGATGCCGCGAGCTGACGACTT TCTCCGACAAACCTTCCGATTTATCGCGTGCATCCCTCGCCCGCCCTCGT GCCTGCTTGTCAGACACAGATAAATCAAAAAGACGAAAAATTGCATTCGC GGTATTCGCGGTATTCGACGTGTACCTTGCCTACATACATACACGCATCG ACCTTTCCGCAGCAAGGGGCAGCAGCACACCCGCATTCCGCTGGAGTTGC GTTCATTACCGTATGTAGGTGACACAAGGTACCACACCCCCTGGATCGAA CTTTAGAGCTCCATTACTCCGTAACGAAGAGGGTGCTGGCACCAAACAAC ATATTTTCGGACAGCTTTCGACTAAATCTTTGCAACGCCACCCCTTTCGG CACTGGCACTCTTCTTGCTGGGGAGGAATCGGGCCTCGAAAATCTTTCCA GGGGGTGTGGTGTCTTGTGTCACCTACGGTATATGTACATACATACGGCA CATGTATACCCCATGCTTTCGGGCTCATCCTGTGCTCTCCGTGTTCTCTT CCCCTCGGCTGTGTGTACCCAGGTCTCTTTTGTGCAGCCTTGCTGTCTCG GTGCGGACGGCGGGTGCTGGTGCTGGAGCAGGGCCCGCTCGTCGGGGCGG GGGCGGTGGCCAAAGCGCCCGAGGGAGCCGGCGACTGGGAGTTTGAGACC GGGGTGCAGTGCCTGGGCGGGGGGGGGAAGCTGGGACGGTTCGTGAAGAG GCTGCAGTTGGCCTGCTTGCCGGGCAAAGGTCAGGGAGATTATTTTGTCG GCAGGGGTGAGGGCGAGAGCGAGAGCGACTAGGGTTTTATCGGGAGAATG TAGTGCGGATGATAGGCTGGTAGGGGCCGCGGAAGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGAAAAACCTTGGGGGCGGGGGCGGGTGCGTGGTG TGGCGGGGGCTGCGGCTGGGTCTGNNNNNNNNGCGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTCAGT GTGGGCGGGTAAAAACCTTGGGCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAC ACCGCAGCAGCCGTTTTTTTGTGTATCTTACCGTAGGTGACACAAGATAC CACACCCCCTGGACAGATTTTCAAAGCTCGATTCCTCTCCAGCAAGAAAA GTGTCGATGCCGAAAGGGGGTGCGTTAGAAAGATCTAGGCGAGGGCTGCC CGAAAATGTGCCGTTTGATGCTGGCACCTTCTTCGTTACGTACTAATGGA GCTCTAAAATTCGGCCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAT TTTCCCGGGATGCGTTTTGTGTAGGTCATGTTTGTTGTACATATGTGTTG GCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCAGCAGCGTTTTTTCTT TTTTTTTGTGCGTCTTCTTTTCCGGGGATCGTTTTGTATTCGAGGGTCAC AAGAGAACCCGTCCGGATCCTTTGCTCTCTCGTGTATAGGCCGGCCGTTC GGGATCTCAGAGCGAACAAAACGTCGAAGCAACCCCCCCCCCCCCCCCCC CCCGGCCGTTCCCACGATTTTGAGAACTCCGCAGCACGCGCCGCGCTGCC ACCAAACTGCCCTTTTCCCTAGATGCACGCACGAGAGAAACTAAGAAAAA GAGGCCAATACGTACGTACACTACACAACCGAGTGCGACAGATAGATATT TAGATGATAAGCAGGGCTTGTTGATACCTGTGTACCTCGTGGCGGAGGTG GCTCTCTCCCCTTTTTTTTTCTGGCTTGCAGCAGAAGGCTGCTTGCTCGC TCGAACGATCGATCGATCTATCGGTCTATCGATGGGTGGATCCATGATCG GGCCAGTGAGACTGTTATCCCGGCTCGCTTGCCTCGCGGACCCATTCGCG GCTTTTCGTGTGCACGCGCGCCGGCAGTACTGTGAAAGCGCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCNNNNNNNNNNCCTTTCCCCCCGCCCCCCTGCCACA CGAACAAAAACGCGGCTTTCCGGGTGCACGCCCCCCGGCAGAACGGGGGA ACCCCCCCCCCCCCCCCCCCCCTCCCTCCCTACCTCCCTCCCTCCCTCCC CGCCGCAGCTGCACGTGCTGGTTGTTTATCTCGGGGGGCCCACCGATCGC GCAATATATATATATATATACATGTTTTTATTTTACCATTTGTAGGCCTC GCTGCAAAGAATGGCAAAAAAAACAGCTCTAGAGGAACGCGTTTTTGTAT GTATGTTAATGTAATTTTTAATACTTGCCATTCATTATTTTAAATCAGAG AAAATCAAGTGGGAGAAGGTGGGCCAGCTGGAGTCGGACCTCTGCGTCCA CGACATGGTGTCCATCGGGGACGGGCAGCAGGCGGTCATGTTCCCAGCGG AGCAGGACAAGCTATTGGAGTCGCTCCTCGCTCAGGTGACGTCCGTTTTG TTGATTGAGTCTTGCCGGCCGCAGCCGGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGCTCGTCCCATTTATTCGGGCGCCTGCCACA CGTTTCGGTGTGTGTACGACATGCACGTTGCGGTGCTGCTTCTTTGTACC GCATGACGCATCCGCCGGGGTCACACAGGAGGGGGTGTGGTATCTTGTGC CACCTATTGTACGGTAGGTACGCAGAGGAGACCGATTGTAGGTAGGTAGG TACAAAGGGGAGATGTGGTGGACCTGTGTGCTCGCCGGAGCCTCTGGCGG GTGGTTCTGGTGGGGTTGGCGCGAACGGCACGATTCGTGCGCGCGTCGGC GCTTTTCCTGCTGCGTGTGGCCTGCTGTATTTTTTGTTTTTGGGCTCCGC CGGTTTGCGAAGTATTTAGTATTTAGCTGTGCCAGCCAGGGTTGGCGTTG CCTGTGTTTGCTGCAAAAAACAAAAACAAAATCGTGTGTCGACCTTTATC GGCAAAAAAACGAAAACAGTTGCCTAATTAGTTGTACAGGGTGCAACATT TGGATGTTTTTTTTTAAGTTTCATGACTACGTATCTAGGCCTTTCGCCGC AGGGTAGGATAGAGCTGGTCCCTGCTGTGTACGCTAAGCTTGTCCTCGAT TTCGTCGGGTTTTGCGGTGGCTGTGCTGCCAAGGGAGGAGCCACACGCGC GCGCGCGCCCTGGTGATATTTTTGCTCGAACGCCGTGGACAAAACGACAG CACGATTTCGGCTCTCGTTTTGTGGTTTCTCCTTTTTCCGGATGTCGCCG TCGCTGTTGACCTGCCTCCCCCCAACCAAAGAGTCCATCCGAATAGAAGT ACTACTTTTCAAGTCCTCCCGGAATGATGATGTACTGCGTGCGGACACCG CAAACTCTCTTGTAGAGGCACCGATACCAACAAAACTGGTGCAACATCAA AGAGGGACGCGTTTGTTCCCTACGTTTATCCAGTGGTTCCGATCCCGTGA GGAGAGCGCTCGCTCTCTCATCTCCTGTCCCCTCTCCCTCACCTTCTTCC CATGCCCCCCCCCCCTCCACACCAACACCAACAACTGTGCCCCGTCGCGC CCGCGCTGGCCCCCCACCAACGCCCTCGTCTGGCGGTGCCGCGCGAAAAC CGCTCACGCCCATGCATCAAAACGGCGGACAGTTTCCCGAGAGGCGAGGG TTCTTCCGAGCCTTTTTCGCACAGGCCGAGAAGGAGATGGCCGGGGGGTC CATGGCGTACTACCTGCTGAAGCTCTTCGCCTCGAGGCCGACGAGGTGGC TCGACAGGGTCGTCGTCGCCGCTTTCGTGGCGACGCCGGCTATGGCCCAC GTGGAAATCGCGAAGCGCAGGTGGGGCGGAGTGTCCAAAAGGCCCTTGCA GATATAGGCCGTGGCGGAGTTCAAGAATGGCTGTTGTTGCTTAGTGGTTC CGTGTACGGAGAAGAGGGCGGGCTTGGTGGTGGTTTTGCTGTCGGTAGAG GGGGCCGAAATTCGGAAGGGTGTATAGCGAGGGGGGGGGGGTTGAACCGC CTTGGCGAAGAATTCCTGCCTATATACAATACCATAGGAAATAATAGACA GGGGTTCCGTAACCCTAACCCTAGCCCTAACCCCAAACCGACCTCCCATT GTAGCCGTTTCCATACTTTATCCGGTATGGATTCTTCCAGTAAAACCTGC GAAGGCCTACTGGGATTTTTCGTCGGTAGGGACGGTGTTATCTTGTTGCA TCCAGCTCCTTTTTTCGTGTGCCTGGCTGGCGTGCGTGGTTATTCATGTT GTAGTGTAGCTGTTTGCCAGGCAAACTTCGACCTCACCGTCGACGAGGGA AAGGGACGGCTGAACCCTTCCTTCTCGCGCCAAAAACCTTAAGGGGGGCA AGCACCGCAGAAGGGGGGAAACGGGGGCCGGCCTCGGGGAAAAAAGAACC CTTCTGTGTGACCATGGTTCAGTACTCAGGCGGGGTGCCGTCGTGGCAGG GAGCCCATCGAGCACTGGAAATAAATGTGAAAACTTAAGAATAAAAAATG AGGCGTTTTTCCTCTCGGCCGGGCCAATTTACATCACCTACTACACTACT GCTGTATGGAATCGTTACTTCACCACAGAGACCGTGGTTTATTGCGTGGG GAGGTTCCTTCTTTGGGTCTCTGTTTTCTTTTCAACAATCACAACAACAA GGCGCCCGCGGGTTTTCCGGGCTGTTCCTCGAACAGATGCATAAACCCAA AAGCAAGGGAAAATATCAGATGGCCGAGCCCGACGGGCGGTGGTGGGTCT CGCTAGCTAGGCCTTGACTTTTTTCGCTTGCGATTTAGTACAAGTAGGCT ACACCTTTTTCTTCTCTGCACTTAAACTCAGTATAAAAAAAAATTGTGTT CCTCCGCAATTCCACCAATAGCCAACGTTCCTAGGTGGGTTTGCCTTGTT GGACCTTTTCCTGATGGTCTCTTCGCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCTCCCCCTCCCCCCCCCCCCCCCCCCCACCCC CAAGCGGCCCCGGGCGCCTCTCACGAAAACACCGGCCGCCGATTTGTTTT CTTTNNNNNNNNNNCCCCCCAATTCCACCAAACCCCCCTCTCCTCGGGGG GGTTTGCTTTTTTGTCCTTTTTCCTTTTGGTCTCTTCCCCCCCCCCCCCC CCCCCCCGCTGCCCCTTCTCTCTTCTCCCCCCCCCCCCACCTCCCCTTCT GTTCCTGGACGGGTGAATAGCGTGTCGGAAATGCTCAACGCGATGATGAA AACGCAGCCGGATGGGAGCGACGACTCCGGGGGCGCGCAGGCCGCCCTCT GCGCATTATTCAGGAGCGAAAACCTGAACCCTGCCAGGGTACGTATGTGG TTGCGTCCTTCTGTCTGTTGCCCCCCCCCCCCCTCCCCCTCGGCCCGAAA CAAAAATACCACAAGCCTTGCTTGGAGCCCGATAATAACGCTCTGTGCGG TGTGTATCTGGCGGCGCCGCCCCCACACGTGTGTATCCGTTTTTCTACCG CGATTCTCTTTGTGTTGTGTAAGTAGTAATATTATATATAGCGTCGGTTC TCTTGCCGCCATGTGTACTTGTAATACCTCTGCCGTGTTTGGTGCGCCGT GTGTTTTGCATTGGTTGCTGTTTTTACCGGTTTTTTTTTTTCACATTTAT TTCCAGTGCTCGATGGGCTCCCTATATCACGAGGACATCTTGCCAGAGTA CTGAACCGTGGTCTCACAGAAGGGTTCCTTTTTTCCAAGGCCCCCGATCC CCCCCCCCGTCTGCGGTGCTTGCCTAAGATTTTTGTGGCGAGAAGGAAGG GTTCAGCCGCCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTGAAGTTT GTGTACACACAATATCTAAGCGCTATCCACTGACAGGATGGATATTATAA GTAAGGTGCCCATATCTTTGTGTCTACATACACACCTGTCGGCCCTCGGC CCTTTTTTTGTCTGTGTTTCGTGTGCTTGGGGCGCCGTGCTGTGCTGTCG TGGCGCGGCTGGCTGGCCGTGCTCTCAAGTCCACGGCGTTTTCTGTGCAA GTTGCAGAACTAACTCCCCTCGCGCGCACGTGCCGAATCGTCGACTTCCA GCTCGTGGTATTATGTGTATTTGGGCCCTCCCGTGATGCATGGGCCCGTC GTCGCTGATATTTAGCGCTCGCGACTTTTTCCGGCGGCGGCGGGGGGTCT GGCCGCGTCTTCTCAATGTCAACTCGTTTTTCGGTTGTGCGTCATGCTGC TGCTGTGGGTGTTTTGCTTGTGTAGATGGCCGTGTGGGGGGCTTGCCTTG GCTTCCTTCCGCCTGGCTCTCGAGCCGCTGCCTCTTTCGCCCGCCCTCAA ATCCCCCCCCCGCCCCCCCCCTCTTTTTGGGGGGTTTCTCGCATCGCAGG TATCGTGCGCGGCGCTGATGGGGCAGACGAGCTCTGCCTGGGGAGGGCTG TACCACCCGCGAGGGGGATTCAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9770:365..7241-

>mRNA_L-elsbetiae_contig9770.18728.1 ID=mRNA_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig9770:365..7241- (Laminarionema elsbetiae ELsaHSoW15)
CAGTTCGAGGCGCCGGATGACCTCGGGGCGGACAAGCTCTCCGACGACTT
CGACCCCGCCAAGTTGTCCGCGGCTGCTGGCGAGGAGTACGACCACGTCG
TTGTGGGGTCCGACCTTGGAGCAGTTCGAGGCGCCGGATGACCTCGGGGC
GGACAAGCTCTCCGACGACTTCGACCCCGCCAAGTTGTCCGCGGCTGCTG
GCGAGGAGTACGACCACGTCGTTGTGGGGTCCGACCTTGGAGGTCTCTTT
TGTGCAGCCTTGCTGTCTCGGTGCGGACGGCGGGTGCTGGTGCTGGAGCA
GGGCCCGCTCGTCGGGGCGGGGGCGGTGGCCAAAGCGCCCGAGGGAGCCG
GCGACTGGGAGTTTGAGACCGGGGTGCAGTGCCTGGGCGGGGGGGGGAAG
CTGGGACGGTTCGTGAAGAGGCTGCAGTTGGCCTGCTTGCCGGGCAAAGG
TCTCTTTTGTGCAGCCTTGCTGTCTCGGTGCGGACGGCGGGTGCTGGTGC
TGGAGCAGGGCCCGCTCGTCGGGGCGGGGGCGGTGGCCAAAGCGCCCGAG
GGAGCCGGCGACTGGGAGTTTGAGACCGGGGTGCAGTGCCTGGGCGGGGG
GGGGAAGCTGGGACGGTTCGTGAAGAGGCTGCAGTTGGCCTGCTTGCCGG
GCAAAGAGAAAATCAAGTGGGAGAAGGTGGGCCAGCTGGAGTCGGACCTC
TGCGTCCACGACATGGTGTCCATCGGGGACGGGCAGCAGGCGGTCATGTT
CCCAGCGGAGCAGGACAAGCTATTGGAGTCGCTCCTCGCTCAGAGAAAAT
CAAGTGGGAGAAGGTGGGCCAGCTGGAGTCGGACCTCTGCGTCCACGACA
TGGTGTCCATCGGGGACGGGCAGCAGGCGGTCATGTTCCCAGCGGAGCAG
GACAAGCTATTGGAGTCGCTCCTCGCTCAGTTTCCCGAGAGGCGAGGGTT
CTTCCGAGCCTTTTTCGCACAGGCCGAGAAGGAGATGGCCGGGGGGTCCA
TGGCGTACTACCTGCTGAAGCTCTTCGCCTCGAGGCCGACGAGGTGGCTC
GACAGGGTCGTCGTCGCCGCTTTCGTGGCGACGCCGGCTATGGCCCACGT
GGAAATCGCGAAGCGCAGTTTCCCGAGAGGCGAGGGTTCTTCCGAGCCTT
TTTCGCACAGGCCGAGAAGGAGATGGCCGGGGGGTCCATGGCGTACTACC
TGCTGAAGCTCTTCGCCTCGAGGCCGACGAGGTGGCTCGACAGGGTCGTC
GTCGCCGCTTTCGTGGCGACGCCGGCTATGGCCCACGTGGAAATCGCGAA
GCGCAGCGTGTCGGAAATGCTCAACGCGATGATGAAAACGCAGCCGGATG
GGAGCGACGACTCCGGGGGCGCGCAGGCCGCCCTCTGCGCATTATTCAGG
AGCGAAAACCTGAACCCTGCCAGGCGTGTCGGAAATGCTCAACGCGATGA
TGAAAACGCAGCCGGATGGGAGCGACGACTCCGGGGGCGCGCAGGCCGCC
CTCTGCGCATTATTCAGGAGCGAAAACCTGAACCCTGCCAGGGTATCGTG
CGCGGCGCTGATGGGGCAGACGAGCTCTGCCTGGGGAGGGCTGTACCACC
CGCGAGGGGGATTCAGGTGAGTATCGTGCGCGGCGCTGATGGGGCAGACG
AGCTCTGCCTGGGGAGGGCTGTACCACCCGCGAGGGGGATTCAGGTGA
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