mRNA_L-elsbetiae_contig9770.18728.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A6H5K335_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K335_9PHAE) HSP 1 Score: 476 bits (1224), Expect = 1.970e-160 Identity = 235/287 (81.88%), Postives = 257/287 (89.55%), Query Frame = 1 Query: 1 QFEAPDDLGADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLP-----GKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGGFR 846 ++EAP+DLG DKLSDDF+PAK+S A GEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPL GAGAV KAP GAGDWEFETGVQCLGGG KLGRFV+RLQLA LP GKEK+KWEKVG+LESDLCVHDMVS+GDG+Q ++FPAEQ+KLLESL+AQFPERR FFRAFF QA+KE GGS+AYYLLKLFASRP RWLDRVVV PAMAHVEIAKRSVSEM+ AM+KTQP+G+DD AQAALCA+FRSENL P+RVSCAALMGQTSSAWGGLYHPRGGFR Sbjct: 171 EYEAPEDLGVDKLSDDFEPAKVSTAPGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLAGAGAVVKAPAGAGDWEFETGVQCLGGGDKLGRFVERLQLAFLPADEGSGKEKLKWEKVGRLESDLCVHDMVSVGDGKQTILFPAEQEKLLESLMAQFPERRPFFRAFFGQAQKEKEGGSLAYYLLKLFASRPARWLDRVVVGLLATAPAMAHVEIAKRSVSEMMKAMLKTQPEGNDDLEAAQAALCAMFRSENLAPSRVSCAALMGQTSSAWGGLYHPRGGFR 457
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: W7U1I8_9STRA (Amino_oxidase domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1I8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 7.280e-18 Identity = 84/283 (29.68%), Postives = 137/283 (48.41%), Query Frame = 1 Query: 25 GADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFET-GVQCLGG---GGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-----ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGGFR 846 GA LS+D + ++ DH+V+GSD+GGL+ AALL+R G RVLVLE G VG + E GV+C G G + + + L+ L G ++KW ++G E+D D+V I +G V++ A + L++ + P ER G F + +E + A+++ +LF+ + W+ ++ + + R+ ++L T PD L +FR+ENL P+ +S AA + T+ A GL +P+GGFR Sbjct: 255 GAPGLSEDARDIRTLLTLPQDVDHIVLGSDVGGLYAAALLARVGHRVLVLEGGETVG------------NCTSELKGVECDWGLLNAGMVHVYDELLKAGALEGAPEVKWSRIGT-EADGHSFDVVKI-EGLGDVVYRAGKQALVDDQVTSAPGPENRERVGTFVSRLQAVAREQS----AFFIGRLFSQQTAGWITTLL--------GQQYGGVGARTAEQVLGV---TLPDYRQLD-----LLRGMFRTENLQPSELSFAAYVSATNHALEGLSYPQGGFR 503
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2D421_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D421_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.290e-17 Identity = 60/168 (35.71%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWL 585 ++ D+VV+GS +GGL+CAALL+R GRRV+VLEQ + AG E G +EF+TG+ +G ++ ++ L L G+ ++WEK+G+ ES V+D V +G F + + +E L+A+FP+ R + +K + Y+ KLFA +P +WL Sbjct: 72 KDIDYVVIGSGMGGLYCAALLARTGRRVVVLEQHYV--AGGCTHTFEDKG-YEFDTGLHYVG---RIEKYKNLLDLVSGGGRS-VEWEKMGEAESGH-VYDEVKLGS-DPGHKFRSGEKSYVEDLVAKFPDEREGIEEYVRLCKKANKAADL-YFFAKLFA-KPIQWL 228
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2V6Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Y3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 8.690e-16 Identity = 86/304 (28.29%), Postives = 128/304 (42.11%), Query Frame = 1 Query: 31 DKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLP-----------------------------GKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKR-SVSEMLNA----MMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840 D L++ F AK A AG DH+V+GSDL GL+ AALLSR G+RV+VLE GPLVG G + K W E GVQ +G K + +Q + LP ++W +G +E+ D+V +G ++ A E L+ FP+ R AQ E + S Y+L ++ + V ++ A + + R S ++ L A ++ Q GS +GGA L P+ VS AA + G ++P+GG Sbjct: 185 DLLAERFSLAK--AEAGGLIDHIVIGSDLEGLYTAALLSRLGQRVVVLESGPLVGGGRLVKQRHNNVVWTAECGVQTVGAVEKTIGMLAAVQASELPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXSDLDLQWFPLGTMENGFAF-DLVDLGPEHATLVCRAGTAAQTEDLITLFPDDRKNILGAIAQVES-LHEESALYFLTRMLPKETAEYSKSFVAPSWQAAATQPAMNMLSRVSTNQGLYAALWSQLRQQTGGSASAGGA------------LLPSDVSFAAYVACMCKRQHGQWYPKGG 472
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2R6Z0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.520e-15 Identity = 82/259 (31.66%), Postives = 123/259 (47.49%), Query Frame = 1 Query: 82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAK--RSVSEMLNAMMKTQPDGSDDSGGAQAALC----ALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840 E D VV+GSDLG LF AA L RCG+RVLVLE G G+V + G EF TG QCL G K+ + L+ A P ++ + W +VG+ ES VH VS+ DG +++ D LE ++++ +R AF A++ AG M +++ P IAK R ++ A + P + LC +L++ ENL+PA ++ AAL+ ++ G ++P GG Sbjct: 214 EGLDFVVLGSDLGALFTAAALGRCGKRVLVLEPGEAA-TGSVVRV----GTTEFVTGDQCLSG--KVESYFNMLK-ALTPPEQAVDWARVGKAESGF-VHSAVSV-DGMDPLLWRTGVDAFLEDMVSKGADRT-MAGAFLLSAQRVAAG--MRWWMCSKL-------------------PEADQAAIAKNLRGQNDQYLAAWAS-PARVESLARHDPLLCFLLFSLWQKENLSPAAINHAALVQSIATIVEGKWYPVGG 439
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A9UNR2_MONBE (Amino_oxidase domain-containing protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UNR2_MONBE) HSP 1 Score: 76.6 bits (187), Expect = 4.640e-12 Identity = 67/206 (32.52%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLC-VHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWL----DRVVVAAFVATPAMAHVEIAKRSVS--EMLNAM 678 ++ D ++VGS +G L CAA+LSR G+R LVLEQ + G A +G +EF+TG+ +G KR + L + ++W+++G+L D+ +D + IGD ++ A D +E+L FPE R R + A+ E + S+ ++ LK+ +RP RWL +R+ F +E+AK S E+L AM Sbjct: 71 KDIDVILVGSGIGSLSCAAMLSRAGKRCLVLEQHHIAGGATHAFTSKG---FEFDTGIHYIG------NIHKRQKYFDLMTETPLEWDRMGRLPWDIEEAYDELRIGD--KSYFLSAGIDNYVEALAKHFPEERDTIRRW-AECCIEASNKSL-FFGLKI--ARP-RWLARLLNRLTGQTFFKNTQRTAMEVAKEFTSNPELLAAM 260
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: F2ULW0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2ULW0_SALR5) HSP 1 Score: 73.6 bits (179), Expect = 5.030e-11 Identity = 73/258 (28.29%), Postives = 114/258 (44.19%), Query Frame = 1 Query: 82 EEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLC-VHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVV----AAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840 ++ D +++GS + L LLSRCGRRVLVLEQ + G G +EF+TGV +G +R + L + KI+W+ +G+ D+ V+D ++IGD + PA + +++L +FP R + A Y+ LK+ RP WL R+++ AF M +E A+ SV+ D+ QA L F P++ S + G Y+PRGG Sbjct: 78 KDIDVIIIGSGISALTLGGLLSRCGRRVLVLEQHYIAGGATHMFEERG---YEFDTGVHYIG------NVSRRQPILDLVSEGKIEWDLMGETPQDIPKVYDEIAIGDHVYGL--PAGRQAFIDTLAKRFPSERAGIEKWVQMCRH--ASRQDQYFTLKVV--RPA-WLARLLLRFMGGAFYKVFNMTALEAAQ-SVT---------------DNKELQAVLLGQFGDHGQTPSKASFFMHASVVNHYIRGGYYPRGG 303
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2S3F8_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S3F8_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 8.420e-11 Identity = 68/238 (28.57%), Postives = 108/238 (45.38%), Query Frame = 1 Query: 67 SAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVS 777 S +++D VV+GS +GGL CAA LSR G++VLVLEQ + G G +G D+ F++G+ + + + LQLAC + ++++K+G ESD C D V +GD + + L L FP ER F + + + + L K+F +W ++ F+ T E +KR+ E+ N ++ A LC L+ P R S Sbjct: 79 SKVTSQDFDVVVIGSGMGGLCCAASLSRFGKKVLVLEQHDVAGGGTHTFVVDGKSDYNFDSGLHYT-----VPQSGELLQLACGTRDKPVEFDKLG--ESDGCF-DKVVLGDLKDDGLRVKHGQAHLSKLREMFPSERDQKDLDEFLRVANMVNDRAPVWMLSKVF----PKWARQLWKKLFLGT----FTEYSKRTGEEVTNELVSNPK--------LAALLCGLWMDAGSPPYRAS 292
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: A0A7S2S4B8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S4B8_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.250e-10 Identity = 68/238 (28.57%), Postives = 108/238 (45.38%), Query Frame = 1 Query: 67 SAAAGEEYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFP-ERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVS 777 S +++D VV+GS +GGL CAA LSR G++VLVLEQ + G G +G D+ F++G+ + + + LQLAC + ++++K+G ESD C D V +GD + + L L FP ER F + + + + L K+F +W ++ F+ T E +KR+ E+ N ++ A LC L+ P R S Sbjct: 79 SKVTSQDFDVVVIGSGMGGLCCAASLSRFGKKVLVLEQHDVAGGGTHTFVVDGKSDYNFDSGLHYT-----VPQSGELLQLACGTRDKPVEFDKLG--ESDGCF-DKVVLGDLKDDGLRVKHGQAHLSKLREMFPSERDQKDLDEFLRVANMVNDRAPVWMLSKVF----PKWARQLWKKLFLGT----FTEYSKRTGEEVTNELVSNPK--------LAALLCGLWMDAGSPPYRAS 292
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Match: F0Y7V0_AURAN (GMC_OxRdtase_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7V0_AURAN) HSP 1 Score: 70.5 bits (171), Expect = 5.310e-10 Identity = 71/252 (28.17%), Postives = 111/252 (44.05%), Query Frame = 1 Query: 85 EYDHVVVGSDLGGLFCAALLSRCGRRVLVLEQGPLVGAGAVAKAPEGAGDWEFETGVQCLGGGGKLGRFVKRLQLACLPGKEKIKWEKVGQLESDLCVHDMVSIGDGQQAVMFPAEQDKLLESLLAQFPERRGFFRAFFAQAEKEMAGGSMAYYLLKLFASRPTRWLDRVVVAAFVATPAMAHVEIAKRSVSEMLNAMMKTQPDGSDDSGGAQAALCALFRSENLNPARVSCAALMGQTSSAWGGLYHPRGG 840 + D+VVVGS + GL+ AALLSRCG V+VLEQ L G G + + +G + F+TGV +G K G+ + + L + ++ W ++G E D +D + +GD + A +D+ + L ++P G R + A + Y+ KLF R++ ++V A +V E++ D D A L + L P+ S G S GG Y P GG Sbjct: 38 DADYVVVGSGVSGLYLAALLSRCGYVVVVLEQHYLAG-GCMHEFADGG--FTFDTGVHYVGRAEKYGKLMDMVSLP----RRRVAWARLGS-ECDGFAYDCLRVGDLPPHAL-RAGEDRFVADLAKRWPAYEGRIRRYVALCKTSNKEADN-YFFGKLF----PRFIQKLVAPRLC----RKFYGFASATVDEVIRG------DCGIDDDDLVATLTGYAGNYGLAPSEASFFVHAGVASHYMGGAYVPVGG 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9770.18728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9770.18728.1 >prot_L-elsbetiae_contig9770.18728.1 ID=prot_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp QFEAPDDLGADKLSDDFDPAKLSAAAGEEYDHVVVGSDLGGLFCAALLSRback to top mRNA from alignment at L-elsbetiae_contig9770:365..7241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9770.18728.1 ID=mRNA_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6877bp|location=Sequence derived from alignment at L-elsbetiae_contig9770:365..7241- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9770:365..7241- >mRNA_L-elsbetiae_contig9770.18728.1 ID=mRNA_L-elsbetiae_contig9770.18728.1|Name=mRNA_L-elsbetiae_contig9770.18728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig9770:365..7241- (Laminarionema elsbetiae ELsaHSoW15)back to top |