Homology
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A813I3N5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I3N5_POLGL)
HSP 1 Score: 50.1 bits (118), Expect = 1.280e-5
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 31 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 162
AFL ++G T+V L GC+P GVL FLPSY + AV W+ S
Sbjct: 379 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 422
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A813DPK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPK9_POLGL)
HSP 1 Score: 50.1 bits (118), Expect = 1.280e-5
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 31 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 162
AFL ++G T+V L GC+P GVL FLPSY + AV W+ S
Sbjct: 730 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 773
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A813DB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DB55_POLGL)
HSP 1 Score: 50.1 bits (118), Expect = 1.280e-5
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 31 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 162
AFL ++G T+V L GC+P GVL FLPSY + AV W+ S
Sbjct: 1043 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 1086
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A4S4M7J8_9AGAM (ATP-dependent DNA helicase CHL1 n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4M7J8_9AGAM)
HSP 1 Score: 48.9 bits (115), Expect = 3.260e-5
Identity = 19/48 (39.58%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 16 NMRDDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGV 159
N+ + + + E+G ++ LA +P G++VFLPSYR+L +A+ VW+ G+
Sbjct: 542 NLSNQSLIIELGQLLLNLARLVPGGMVVFLPSYRVLNQALSVWKEGGL 589
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A1Y2G4S4_9BASI (ATP-dependent DNA helicase CHL1 n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G4S4_9BASI)
HSP 1 Score: 47.8 bits (112), Expect = 8.400e-5
Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 22 RDDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGV 159
+D+ L+E+G ++V +A +P+G++VF+PSY L + W ASG+
Sbjct: 674 KDEKLLDELGQSIVNIAQVVPKGIVVFVPSYDFLNQVQARWEASGM 719
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match:
A0A316UHP8_9BASI (ATP-dependent DNA helicase CHL1 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UHP8_9BASI)
HSP 1 Score: 47.8 bits (112), Expect = 8.400e-5
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 25 DDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASG 156
D A L+++G + A IP GV+VFLPSY++L E V W+ +G
Sbjct: 698 DTALLDDLGNAIANFAALIPHGVVVFLPSYKLLDELVARWKETG 741
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 6
0 1 Expect = 1.28e-5 / Id = 50.00 Expect = 1.28e-5 / Id = 50.00 Expect = 1.28e-5 / Id = 50.00 Expect = 3.26e-5 / Id = 39.58 Expect = 8.40e-5 / Id = 39.13 Expect = 8.40e-5 / Id = 45.45 Sequence A0A813I3N5_POLGL A0A813DPK9_POLGL A0A813DB55_POLGL A0A4S4M7J8_9AGAM A0A1Y2G4S4_9BASI A0A316UHP8_9BASI
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Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817036.462158-UTR-L-elsbetiae_contig9723:147..165 1622817036.462158-UTR-L-elsbetiae_contig9723:147..165 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig9723 148..165 +
1691683999.2413352-UTR-L-elsbetiae_contig9723:147..165 1691683999.2413352-UTR-L-elsbetiae_contig9723:147..165 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig9723 148..165 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817036.4726968-CDS-L-elsbetiae_contig9723:165..312 1622817036.4726968-CDS-L-elsbetiae_contig9723:165..312 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig9723 166..312 +
1691683999.253697-CDS-L-elsbetiae_contig9723:165..312 1691683999.253697-CDS-L-elsbetiae_contig9723:165..312 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig9723 166..312 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9723.18694.1
>prot_L-elsbetiae_contig9723.18694.1 ID=prot_L-elsbetiae_contig9723.18694.1|Name=mRNA_L-elsbetiae_contig9723.18694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp
MRDDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS* back to top mRNA from alignment at L-elsbetiae_contig9723:148..312+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9723.18694.1 ID=mRNA_L-elsbetiae_contig9723.18694.1|Name=mRNA_L-elsbetiae_contig9723.18694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=165bp|location=Sequence derived from alignment at L-elsbetiae_contig9723:148..312+ (Laminarionema elsbetiae ELsaHSoW15)AGGTGCGTTACGCTCAAC ATGAGGGACGACGCGTTCTTGAACGAGATCGG
GTGCACGGTTGTGGCCCTCGCCGGCTGCATACCCCGCGGAGTCCTCGTGT
TTCTGCCATCGTACCGGATACTTGGCGAGGCCGTGCGGGTCTGGCGTGCT
AGCGGGGTAAGTTGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9723:148..312+
>mRNA_L-elsbetiae_contig9723.18694.1 ID=mRNA_L-elsbetiae_contig9723.18694.1|Name=mRNA_L-elsbetiae_contig9723.18694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=294bp|location=Sequence derived from alignment at L-elsbetiae_contig9723:148..312+ (Laminarionema elsbetiae ELsaHSoW15) ATGAGGGACGACGCGTTCTTGAACGAGATCGGGTGCACGGTTGTGGCCCT CGCCGGCTGCATACCCCGCGGAGTCCTCGTGTTTCTGCCATCGTACCGGA TACTTGGCGAGGCCGTGCGGGTCTGGCGTGCTAGCGGGGTAAGTTGAATG AGGGACGACGCGTTCTTGAACGAGATCGGGTGCACGGTTGTGGCCCTCGC CGGCTGCATACCCCGCGGAGTCCTCGTGTTTCTGCCATCGTACCGGATAC TTGGCGAGGCCGTGCGGGTCTGGCGTGCTAGCGGGGTAAGTTGA back to top