Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | mitochondrion |
Exons | 1 |
Model size | 720 |
Cds size | 360 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817034.879289-CDS-L-elsbetiae_contig9702:567..927 | 1622817034.879289-CDS-L-elsbetiae_contig9702:567..927 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9702 568..927 + |
1691683998.18222-CDS-L-elsbetiae_contig9702:567..927 | 1691683998.18222-CDS-L-elsbetiae_contig9702:567..927 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9702 568..927 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817034.8942356-UTR-L-elsbetiae_contig9702:927..1285 | 1622817034.8942356-UTR-L-elsbetiae_contig9702:927..1285 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9702 928..1285 + |
1691683998.1918194-UTR-L-elsbetiae_contig9702:927..1285 | 1691683998.1918194-UTR-L-elsbetiae_contig9702:927..1285 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9702 928..1285 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9702.18677.1 >prot_L-elsbetiae_contig9702.18677.1 ID=prot_L-elsbetiae_contig9702.18677.1|Name=mRNA_L-elsbetiae_contig9702.18677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
PIVITARRGRSPGRAATAVAGRSSALAAVVAAAVAAEVGSARGWGFLVGG SSFVLPFPSPLPAAAAAARAAAAAAATNPLTFALISLGGGTAVLARGQGA TEGRAMASRMRRRFEDLEE* back to topmRNA from alignment at L-elsbetiae_contig9702:568..1285+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9702.18677.1 ID=mRNA_L-elsbetiae_contig9702.18677.1|Name=mRNA_L-elsbetiae_contig9702.18677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=718bp|location=Sequence derived from alignment at L-elsbetiae_contig9702:568..1285+ (Laminarionema elsbetiae ELsaHSoW15) CCCATCGTCATCACCGCGCGGCGAGGAAGATCGCCGGGGCGAGCCGCTAC
GGCGGTGGCCGGTCGCTCCTCTGCTCTCGCTGCTGTTGTCGCTGCCGCTG
TCGCTGCTGAAGTAGGTTCGGCGCGGGGGTGGGGTTTCCTTGTCGGTGGA
AGCAGCTTCGTCCTTCCGTTCCCTTCTCCTCTTCCTGCCGCCGCTGCCGC
CGCTCGGGCTGCTGCTGCTGCTGCTGCTACTAACCCCCTTACCTTTGCCC
TTATTAGCCTGGGCGGCGGAACCGCCGTTCTTGCTCGCGGGCAGGGGGCT
ACTGAGGGTCGTGCTATGGCTAGTCGAATGAGAAGGCGGTTTGAAGACCT
TGAAGAATGAGGCGTCGCTCACGCAGTCGTCGCCGCCGTTGCCCGCAGCT
ACAGCTGCCGGTGGCGGCGCCATGGTAGAGCTAGCAGGGGGGGGTGTTGG
CCCATCCTCGTCGTCCTCCGCAAAGATCGAAGCGAATTCAAACTCCGGCG
AGGACGTCATTTGAGGAACGGCCGCGGTGCCGATAGCGCTGGTCCTGGTG
GAAGAGGTGCATGGCCGTGTTGCTCCCGATGTTGCAGTTGACAGTGCAGT
GCCAGCGGGTTGTGCGATACTGATGTTTGAGAAAAAGGGACGTGCTGCTC
GGTTTTCTCCAGAATTCAAGTCAAACGACGGGGCCAGCCGTAATGATTCC
ATCGGCTCTCGCTGGGCT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9702:568..1285+ >mRNA_L-elsbetiae_contig9702.18677.1 ID=mRNA_L-elsbetiae_contig9702.18677.1|Name=mRNA_L-elsbetiae_contig9702.18677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig9702:568..1285+ (Laminarionema elsbetiae ELsaHSoW15) CCCATCGTCATCACCGCGCGGCGAGGAAGATCGCCGGGGCGAGCCGCTAC GGCGGTGGCCGGTCGCTCCTCTGCTCTCGCTGCTGTTGTCGCTGCCGCTG TCGCTGCTGAAGTAGGTTCGGCGCGGGGGTGGGGTTTCCTTGTCGGTGGA AGCAGCTTCGTCCTTCCGTTCCCTTCTCCTCTTCCTGCCGCCGCTGCCGC CGCTCGGGCTGCTGCTGCTGCTGCTGCTACTAACCCCCTTACCTTTGCCC TTATTAGCCTGGGCGGCGGAACCGCCGTTCTTGCTCGCGGGCAGGGGGCT ACTGAGGGTCGTGCTATGGCTAGTCGAATGAGAAGGCGGTTTGAAGACCT TGAAGAATGACCCATCGTCATCACCGCGCGGCGAGGAAGATCGCCGGGGC GAGCCGCTACGGCGGTGGCCGGTCGCTCCTCTGCTCTCGCTGCTGTTGTC GCTGCCGCTGTCGCTGCTGAAGTAGGTTCGGCGCGGGGGTGGGGTTTCCT TGTCGGTGGAAGCAGCTTCGTCCTTCCGTTCCCTTCTCCTCTTCCTGCCG CCGCTGCCGCCGCTCGGGCTGCTGCTGCTGCTGCTGCTACTAACCCCCTT ACCTTTGCCCTTATTAGCCTGGGCGGCGGAACCGCCGTTCTTGCTCGCGG GCAGGGGGCTACTGAGGGTCGTGCTATGGCTAGTCGAATGAGAAGGCGGT TTGAAGACCTTGAAGAATGA back to top
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