mRNA_L-elsbetiae_contig965.18629.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 131 bits (329), Expect = 9.710e-35 Identity = 73/122 (59.84%), Postives = 86/122 (70.49%), Query Frame = -2 Query: 42 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVD-NPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSD---DHGAGNEGGGFKVARSENIAGV 395 H C R+EGLEAA D+LLRWGADET L+ G PA L + + NPA Q+EI+RTRLLL+ APADRAW RRGWLVMLRSR SKA+ G+C S DHG G E GG ++ARSE +AG Sbjct: 23 HETCWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSGGYDHGDGGEVGGSEMARSEGMAGA 144
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.690e-22 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 84 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSDDHGAGNEG 395 H AC+ +++GLEA DLLLRWGADETAL++ G PA LLD + E+ ++ EI R R+LL APADRAW RR WLVMLRS A+ + T+D+ G +EG Sbjct: 344 HVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSF---ARTAKATTDETGDAHEG 444
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 101 bits (251), Expect = 8.450e-22 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = -2 Query: 84 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSDDHGAGNEG 395 H AC+ + G+EA DLLLRWGADETALD+D PA LLD ++ E+ ++ EIE+ RLL+ APA+RAW RR WLVMLRS AK R T++ G +EG Sbjct: 262 HWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSY---AKTARATTEATGDADEG 362
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.320e-21 Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 84 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSDDHGAGNEG 395 H AC+ ++ GLEA DLLLRWGADETAL++DG PA LLD + E+ ++ EIER RLLL APAD+A RR WLVMLRS A+ R T+D+ G +EG Sbjct: 558 HLACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADLLDEHDNENDRTTCSEAEIERVRLLLARAPADQARRRRCWLVMLRSF---ARTTRATTDETGDAHEG 658
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.880e-19 Identity = 61/142 (42.96%), Postives = 75/142 (52.82%), Query Frame = -2 Query: 144 AIDALIKAGANVELKEGDGRTPLATAALNSRCKAIXXXXXXXXXXXXXXXXXXXXX-HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNP-ATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSR 563 A+ L+KA A+ ELK G TPL AA + R + H AC + EGL A+ DLLLRWGADETA + G P +L DNP + +E++R RLLL AP DR W RRGWLV+LRSR Sbjct: 290 AVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATR---TDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSR 428
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 2.780e-18 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = -2 Query: 84 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSDDHGAGNEG 395 H AC+ ++ G+EA DLLL+WGADETA+ +DG+ PA L +E + + EI R RLLL APA+RAW RR WLVMLRS AK R T+D G +EG Sbjct: 285 HRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWL-VENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSC---AKTARATTDKTGDADEG 384
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 1.160e-17 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = -2 Query: 129 QAGAIDALIKAGANVELKEGDGRTPLATAA-LNSRCKAIXXXXXXXXXXXXXXXXXXXXXHSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAK 572 QAGA+D L+ AGA+++ K TPL A + +A+ H AC G +A DLLLRWG E LD G+ PAALL + E + E+ER +LL APADRAW RR WLVMLR+R + + Sbjct: 281 QAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTML--HLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAE---GSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 6.760e-16 Identity = 56/167 (33.53%), Postives = 80/167 (47.90%), Query Frame = -2 Query: 129 AIDALIKAGANVELKEGD---GRTPLATAALNSRCKAIXXXXXXXXXXXXXXXXXXXXXHSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEE------DVDNPATQ-------------NEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAK 563 A+D L+ AGA+V K G TPL+ +++ C+A+ H C + G++ DLLLRWGA ETA++ +G P+ +L + E D AT+ EI+R R+LL APADR W RR WLVMLR+R + + Sbjct: 288 AVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGR 454
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: A0A6H5J7H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H5_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.490e-15 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = -2 Query: 105 HSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKVGRCTSDD 395 H AC+ +++GLEA LLLR GADETA++S + PA LL +++D ++ EIER RLLL AP +RAW R WLVMLRS AK GR ++D+ Sbjct: 114 HRACYWQHKGLEATVGLLLRSGADETAVNSADETPADLLGYLDDDDGKR-YSEAEIERVRLLLARAPTNRAWLGRCWLVMLRSC---AKTGRASTDE 206
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 5.450e-15 Identity = 52/153 (33.99%), Postives = 75/153 (49.02%), Query Frame = -2 Query: 126 QAGAIDALIKAGANVELKEGDGR----TPLATAALNSRCKAIXXXXXXXXXXXXXXXXXXXXXHSACHGRNEGLEAAADLLLRWGADETALDSDGDRPAALLDMEEEEDVDNPATQNEIERTRLLLTGAPADRAWHRRGWLVMLRSRYSKAKV 572 QA A++ L++AGA+ +++ G TPL AA + +A+ H A H + G+ DLLLRWGA ETA++ G+ PA + + P E +LL APADRAW RRGW+VMLR+R ++ Sbjct: 214 QAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLA---IHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERI 363 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig965.18629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig965.18629.1 >prot_L-elsbetiae_contig965.18629.1 ID=prot_L-elsbetiae_contig965.18629.1|Name=mRNA_L-elsbetiae_contig965.18629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp MTSQPRRCHALSAGAPVSSRRVRSISFCVAGLSTSSSSSISSSAAGRSPSback to top mRNA from alignment at L-elsbetiae_contig965:9758..10330+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig965.18629.1 ID=mRNA_L-elsbetiae_contig965.18629.1|Name=mRNA_L-elsbetiae_contig965.18629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=573bp|location=Sequence derived from alignment at L-elsbetiae_contig965:9758..10330+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig965:9758..10330+ >mRNA_L-elsbetiae_contig965.18629.1 ID=mRNA_L-elsbetiae_contig965.18629.1|Name=mRNA_L-elsbetiae_contig965.18629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig965:9758..10330+ (Laminarionema elsbetiae ELsaHSoW15)back to top |