mRNA_L-elsbetiae_contig963.18610.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE) HSP 1 Score: 254 bits (648), Expect = 6.010e-78 Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 1 Query: 40 PWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 P S+T ARPGGRAARLL DEPIRIYVPM MR W+M ACH++A CHLG+ARTL++LERFYWW+GMSV T++WVR C +CQARKSSR T RWP + +PLPSGPG+++SVDYFGPLP TPRG +YILLFTDRFSRRADMYAVT A+FTAEGTA++LVN Sbjct: 301 PPSST-TARPGGRAARLLNDEPIRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKSSRQTPRWPTLCLPLPSGPGVSVSVDYFGPLPLTPRGNTYILLFTDRFSRRADMYAVTAAEFTAEGTADVLVN 455
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KFR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR4_9PHAE) HSP 1 Score: 243 bits (621), Expect = 6.460e-77 Identity = 116/164 (70.73%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 16 SLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 S ++ TP S T RPGGRAARLL DEPIRIYVP+ MR W+M CH++A CHLG+ARTL++LERFYWWIGMSV T++WVR C +CQARKSSR T RWP +S+PLPSGPG+++SVD+FGPLP TPRG +YILLFTDRFSR ADMYAVT +F AEGTA ILVN Sbjct: 235 SGDRAAATPSSMT--TRPGGRAARLLNDEPIRIYVPILMRPWMMQVCHADASCHLGAARTLSMLERFYWWIGMSVCTKWWVRHCLRCQARKSSRQTPRWPTMSLPLPSGPGVSVSVDHFGPLPLTPRGNTYILLFTDRFSRHADMYAVTAEEFIAEGTAEILVN 396
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 251 bits (640), Expect = 4.500e-74 Identity = 117/165 (70.91%), Postives = 138/165 (83.64%), Query Frame = 1 Query: 13 LSLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 L + K T P S RPGGRAARLL DEPIRIYVPM MR W+M ACH++A CHLG+ARTL++LERFYWW+GMSV T++WVR C +CQARK+S T RWP + +PLPSGPG+++SVDYFGPLP TPRG +YILLFTDRFSRRADMYAVT A+FTAEGTA++LVN Sbjct: 814 LLVRKQTTPPLS--AATRPGGRAARLLNDEPIRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKASHQTPRWPTLCLPLPSGPGVSVSVDYFGPLPLTPRGNTYILLFTDRFSRRADMYAVTAAEFTAEGTADVLVN 976
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5JTW9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW9_9PHAE) HSP 1 Score: 207 bits (527), Expect = 3.270e-64 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIG+ S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN Sbjct: 59 VGRSGGRTTRLPNTGVPRVYVPMLMRRWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTSRWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 208
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KGR2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR2_9PHAE) HSP 1 Score: 207 bits (527), Expect = 7.540e-63 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIG+ S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN Sbjct: 59 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTSRWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 208
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KKB3_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB3_9PHAE) HSP 1 Score: 208 bits (529), Expect = 2.690e-62 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIG+ S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN Sbjct: 301 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 450
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KK47_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK47_9PHAE) HSP 1 Score: 196 bits (497), Expect = 3.290e-60 Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = 1 Query: 109 RIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 R+YVPM MR WV+ ACH+ A HLG RT LLERFYWWIG+ S R+W+RAC CQARK+SR T RWP+I++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA GTA+I VN Sbjct: 15 RVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLPVTAKGNSYILLFTDRFSRRADMFAVTAAEFTARGTAHIFVN 147
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5K119_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K119_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.670e-60 Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIG+ S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+ TANI VN Sbjct: 428 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKRTANIFVN 577
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5K2S7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2S7_9PHAE) HSP 1 Score: 206 bits (523), Expect = 8.750e-60 Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL + R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIGM S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+ V A+FTA+GTANI VN Sbjct: 59 VGRSGGRTTRLPNNGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGMDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFHVIAAEFTAKGTANIFVN 208
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5J9W8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W8_9PHAE) HSP 1 Score: 208 bits (529), Expect = 3.620e-59 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 58 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 507 V R GGR RL R+YVPM MR WV+ ACH++A HLG RT LLERFYWWIG+ S R+W+R+C CQARK+SR T RWPII++PLP GPG + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN Sbjct: 534 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 683 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig963.18610.1 >prot_L-elsbetiae_contig963.18610.1 ID=prot_L-elsbetiae_contig963.18610.1|Name=mRNA_L-elsbetiae_contig963.18610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp TVCDLSLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFback to top mRNA from alignment at L-elsbetiae_contig963:29315..29821+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig963.18610.1 ID=mRNA_L-elsbetiae_contig963.18610.1|Name=mRNA_L-elsbetiae_contig963.18610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=507bp|location=Sequence derived from alignment at L-elsbetiae_contig963:29315..29821+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig963:29315..29821+ >mRNA_L-elsbetiae_contig963.18610.1 ID=mRNA_L-elsbetiae_contig963.18610.1|Name=mRNA_L-elsbetiae_contig963.18610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig963:29315..29821+ (Laminarionema elsbetiae ELsaHSoW15)back to top |