mRNA_L-elsbetiae_contig9332.18333.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: Q8QNB7_ESV1K (EsV-1-168 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB7_ESV1K) HSP 1 Score: 158 bits (400), Expect = 5.170e-47 Identity = 78/132 (59.09%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 10 QADLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKVGW 405 + +LTY+ CEPFLPL+DGD YDGDS L W D S R+ RLLGVDTPE+RGSS EKALALRAK RL + G+ VTIR PG EKYGR L +L+ D VS YM+ D +IC PYDGGKKV W Sbjct: 34 EEELTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDRSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVISGEFVTIRKPGNEKYGRALCDLQTDTLASVSEYMIADPDICRPYDGGKKVSW 165
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: D8LPI6_ECTSI (EsV-1-168 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI6_ECTSI) HSP 1 Score: 145 bits (366), Expect = 6.430e-42 Identity = 72/130 (55.38%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 16 DLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKVGW 405 +L Y+ CEPFLPL+DGD YDGDS L W D R+ RL GVDTPE+ GSS EK LALRAK RL + G+ VTIR+PG EKYGR L +L+ VS YML D EIC PYDGG+K+ W Sbjct: 31 ELAYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWIDGLGCKSRIMGRLAGVDTPEMNGSSDKEKVLALRAKQRLSDVIAGEFVTIRTPGNEKYGRALCDLQTAKLASVSDYMLADPEICRPYDGGRKLSW 160
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: B5LWN7_9PHYC (Putative nuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN7_9PHYC) HSP 1 Score: 132 bits (331), Expect = 8.600e-37 Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 19 LTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKVGWMS 411 L ++ C +LP+ +GD V +VYDGD+ TL W D + VR +CR+ +DTPE+RG S E+ +A AK+RL+S +L K VT+ P +KYGRILA+L + VS YMLE +IC Y GGKK W+S Sbjct: 11 LCFRECVRYLPVHEGDIVFVCRVYDGDTCTLAWVDHAGRSVRSSCRIRDIDTPEMRGKSPEERKMASLAKERLQSAILEKFVTVWRPSSDKYGRILADLSTESIRSVSTYMLEMPDICKSYTGGKKTPWLS 141
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A835Z7E9_9STRA (FirrV-1-P2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E9_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.600e-36 Identity = 63/129 (48.84%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 19 LTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKVGW 405 LTY++C+ FL L++GD+ K++KVYDGD++T + + V+ CRL G+DTPEL S HEKALA++A+D L + L K+VT++SP EKYGRIL +LEVDG M+ ++C+ YDGG K W Sbjct: 7 LTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIP-VKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKS-ACDEMMALHDVCYAYDGGSKKQW 133
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: Q6XM34_9PHYC (FirrV-1-B2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM34_9PHYC) HSP 1 Score: 121 bits (304), Expect = 8.410e-33 Identity = 56/127 (44.09%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 1 MDDQADLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPY 381 M DQ L +++C P +PL+DG++A V KVYDGD+ TL W D VR++CR+ +DTPE+R + E+ A++AK++L VL + VT+++PGK+KYGR+LA++ D V+ YML ++C P+ Sbjct: 1 MTDQ--LKFEDCVPCMPLEDGEKAYVCKVYDGDTCTLAWIDHKGRKVRISCRIRDIDTPEMRSKATEERTRAVQAKEKLADVVLYREVTVKNPGKDKYGRLLADIATDKLESVAEYMLTFTDLCKPF 125
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A835YYA9_9STRA (Putative nuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA9_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.670e-31 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 19 LTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDG-DIDVSGYMLEDAEICHPYDGGKKVGWMS 411 +TY C+ +LP DGD AKV++V DGD++ L S+ R+ CRL G+D EL HEKAL +AK L + K+VT+ + G EKYGR+LA+L V+G ++ +S ML+ ++CH YDGGKK W++ Sbjct: 21 VTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLAL-KSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPWLN 151
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A6C0IR71_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IR71_9ZZZZ) HSP 1 Score: 94.0 bits (232), Expect = 1.000e-21 Identity = 48/128 (37.50%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 19 LTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHV-RLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKV 399 +TY+ PF+P + KV+KVYDGD++T+ + V R + RL G+D+PE++G + EK A++++D L+ + G+IV ++ EKYGR+LA + +++++ +MLE+ + PYDGGKK+ Sbjct: 24 VTYEKSTPFIPPVT--KGKVVKVYDGDTITVASRIMNSKKVYRFSVRLNGIDSPEIKGKTVEEKTAAIKSRDALKDIIFGQIVVLKDVKTEKYGRLLATV-YHNNVNMNNWMLEN-NLAIPYDGGKKI 147
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A6C0FAZ2_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAZ2_9ZZZZ) HSP 1 Score: 93.2 bits (230), Expect = 2.100e-21 Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 16 DLTYKNCEPFLP-LKDGDRAKVLKVYDGDSLTLGWGDSSENH--VRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKK---VGWM 408 D + NCEPF P +K G KV+KVYDGDS+T+ EN+ R + RL G+DTPELR S+ +EKA A A+D L K+ KIV +++ EKYGR+LA++ + GD +++ +++ YDGG K WM Sbjct: 23 DSCWDNCEPFSPHVKIG---KVIKVYDGDSITIA-AKPYENYPIYRFSVRLNGIDTPELRTSNENEKAHAKIARDALHDKIYDKIVELKNVESEKYGRLLADIYL-GDENINEWLINQ-NFAVKYDGGTKEKPASWM 153
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A6C0HI73_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HI73_9ZZZZ) HSP 1 Score: 93.2 bits (230), Expect = 2.450e-21 Identity = 52/134 (38.81%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 4 DDQADLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLG--WGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKKV 399 DD +++Y N PF+P KV+KVYDGD++T+ S R+A RL G+DTPE++G + EK LA + +D L++K++ KIV +++ EKYGR+LA++ +DG + ++ +M+E Y GG K+ Sbjct: 28 DDFTNISYDNTVPFVPPVT--YGKVIKVYDGDTITIAARLPYSKSAIYRIAVRLNGIDTPEIKGQTQKEKDLAKKIRDTLQTKLMNKIVQLKNTSSEKYGRLLADVYLDG-VCINEWMVEQGYAVR-YHGGTKI 157
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Match: A0A6C0LVU8_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LVU8_9ZZZZ) HSP 1 Score: 89.4 bits (220), Expect = 8.320e-20 Identity = 50/131 (38.17%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 16 DLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLG----WGDSSENHVRLACRLLGVDTPELRGSSAHEKALALRAKDRLESKVLGKIVTIRSPGKEKYGRILANLEVDGDIDVSGYMLEDAEICHPYDGGKK 396 ++ YK PF+P G KV+KVYDGD++T+ W +S + R + R+ G+D PE++G + +EK A+ A++ ++ V GKIV + + EKYGRILA++ ++G +++ +LE + YDGGKK Sbjct: 29 EIKYKETIPFIPPVTG--GKVIKVYDGDTITIASKMPWDNSP--YYRFSVRINGIDCPEIKGKTENEKQCAILAREHVDHLVNGKIVHLENVSLEKYGRILADVFIEG-VNIGQSLLEK-RLAVSYDGGKK 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9332.18333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9332.18333.1 >prot_L-elsbetiae_contig9332.18333.1 ID=prot_L-elsbetiae_contig9332.18333.1|Name=mRNA_L-elsbetiae_contig9332.18333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp MDDQADLTYKNCEPFLPLKDGDRAKVLKVYDGDSLTLGWGDSSENHVRLAback to top mRNA from alignment at L-elsbetiae_contig9332:3244..3660+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9332.18333.1 ID=mRNA_L-elsbetiae_contig9332.18333.1|Name=mRNA_L-elsbetiae_contig9332.18333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=417bp|location=Sequence derived from alignment at L-elsbetiae_contig9332:3244..3660+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9332:3244..3660+ >mRNA_L-elsbetiae_contig9332.18333.1 ID=mRNA_L-elsbetiae_contig9332.18333.1|Name=mRNA_L-elsbetiae_contig9332.18333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig9332:3244..3660+ (Laminarionema elsbetiae ELsaHSoW15)back to top |