mRNA_L-elsbetiae_contig9319.18321.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: D7FZ40_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ40_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.980e-94 Identity = 141/168 (83.93%), Postives = 153/168 (91.07%), Query Frame = 2 Query: 2 TLGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQ 505 TLGNADLAYKFHYWDGAVLPMGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYTDVAQAS+GL+GLL +AWML NR HP PSIGFPGYLYP+D CE Y+ Sbjct: 38 TLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYTDVAQASLGLLGLLTTSAWMLSNRSPDHPSPSIGFPGYLYPDDATCEAYE 205
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE) HSP 1 Score: 295 bits (755), Expect = 1.500e-92 Identity = 141/168 (83.93%), Postives = 153/168 (91.07%), Query Frame = 2 Query: 2 TLGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQ 505 TLGNADLAYKFHYWDGAVLPMGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYTDVAQAS+GL+GLL +AWML NR HP PSIGFPGYLYP+D CE Y+ Sbjct: 84 TLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYTDVAQASLGLIGLLTTSAWMLSNRSPDHPGPSIGFPGYLYPDDATCEAYE 251
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: D7FZ36_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ36_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.890e-68 Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 2 Query: 2 TLGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYT 358 TLGNADLAYKFHYWDGAVLPMGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYT Sbjct: 84 TLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYT 202
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT) HSP 1 Score: 205 bits (521), Expect = 6.060e-58 Identity = 99/178 (55.62%), Postives = 134/178 (75.28%), Query Frame = 2 Query: 5 LGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQVRLCMS-ALLC 535 LGNADL+YKFH+WDGAVLP+GLGLSLIING+F+AR I++ VLTLP+ Y + +GP VE+ VS + C SFI LLAGNL G++ ++ +L G T+VF++G V VYT +GGL SVA+TDV Q++IG++G L+ A W + N PPPSIGFPGY+YP++ C++Y+ C + A LC Sbjct: 123 LGNADLSYKFHFWDGAVLPIGLGLSLIINGVFLARFIHRENVLTLPEIYARYYGPVVEVCVSFVCCASFISLLAGNLVGMAAVLGYLGGIDQTTAVFVSGTVLFVYTVSGGLFSVAFTDVVQSTIGIIGALVTAFWFIQNAPAA-PPPSIGFPGYVYPDEATCKLYEGVPCSADADLC 299
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: C1E525_MICCC (Solute:Sodium symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E525_MICCC) HSP 1 Score: 196 bits (497), Expect = 2.500e-54 Identity = 96/185 (51.89%), Postives = 129/185 (69.73%), Query Frame = 2 Query: 5 LGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPG-------------------YLYPNDDICEMY 502 LGNADL+YK+H++DGAVLP+GLGLSLI+NG+F+A +N+ VLTLPD YGK +G AVEI+ S+ TC SF+CLLAGNL G+SVI+ ++F + +VF++G + + YT GGL SVAYTDV QA+IG++G L VA W+++N + PPPSIG P Y+YP+D MY Sbjct: 128 LGNADLSYKYHFYDGAVLPIGLGLSLILNGIFLAHKVNEELVLTLPDIYGKKYGKAVEIVTSICTCCSFLCLLAGNLVGMSVILAYIFDISEVGAVFLSGIICLAYTACGGLFSVAYTDVVQAAIGMIGCLSVAYWLINNAKEEAPPPSIGMPKTAAYTTVTSGTVANQDIGFYVYPDDATAAMY 312
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.630e-54 Identity = 95/168 (56.55%), Postives = 122/168 (72.62%), Query Frame = 2 Query: 2 TLGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTS-VFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMY 502 TLGNADLAYKF ++DGA LP+GLG+SLI+NGL +ARH+N A LTLPDFY + +G E+LVSL+ C SFI LLAGNL GL I++F FGG V++A + YT GGL+SV Y DV QA G+ GL++ +A+ML N +PP S+GFPGY+YP+ +CEMY Sbjct: 98 TLGNADLAYKFAWFDGAALPIGLGVSLILNGLLLARHVNNACCLTLPDFYARKYGKLFEVLVSLVLCTSFISLLAGNLVGLGRILQFCFGGISKAGGVWVAAALCASYTIGGGLVSVVYADVVQALTGVTGLIVFSAYMLSNYSQQYPPASVGFPGYIYPDQQVCEMY 265
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: K8FEG1_9CHLO (Solute:Sodium symporter family n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEG1_9CHLO) HSP 1 Score: 193 bits (491), Expect = 1.730e-53 Identity = 91/166 (54.82%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 5 LGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMY 502 LGNADL+YKF ++DGAVLP+GLGLSLI+N LF A+ +N VLTLPD YGK +G A EI+ SL+ C SF+CLLAGNL G++ I+ +LF + VF++G + +VYT GGL SVAYTDV Q+++G+ G L W++ N E PPPSIGFP Y+YP++ ++Y Sbjct: 147 LGNADLSYKFAFFDGAVLPIGLGLSLILNALFFAKKMNAEGVLTLPDVYGKRYGVATEIIASLVLCCSFLCLLAGNLVGMAKILAYLFDLDITDGVFLSGIIILVYTACGGLFSVAYTDVIQSAVGMTGCLAAVYWIIKNAEFEAPPPSIGFPDYVYPDEATAKLY 312
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A7S2VEF1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEF1_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.530e-51 Identity = 94/176 (53.41%), Postives = 123/176 (69.89%), Query Frame = 2 Query: 5 LGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPND----DICEMYQVRLCM 520 LGNADL+YK+H++DGAV+P+GLG+SL+ING+F+A HIN VLTLPD + K +G VE+LVSL T SFI LLAGNL G I +L+ + +++IA V +YT GGL SVAYTDV Q IG G +++A W + N ET PPPSIGFPGY+YP++ C+MY C+ Sbjct: 124 LGNADLSYKYHFYDGAVIPIGLGMSLLINGIFLAHHINNEEVLTLPDIFAKRYGKTVEVLVSLCTVCSFIMLLAGNLVGFGAITSYLWDISEEAAIWIAAIVIWMYTATGGLFSVAYTDVVQGVIGWSGCVVMAFWFIAN-ETEAPPPSIGFPGYIYPDNIGDGGTCDMYNGTACV 298
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A7S3K6Q6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6Q6_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.110e-50 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 2 Query: 2 TLGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPN---DDICEMY 502 LGNADL+YK+H+WDGA LP+GLGLSLI+NGLF+ARH+N+A +LTLPD + + +G A E++ + VSF LLAGNL G I+ FLFG +L + I+G + +YT GG+LSVAY+D+AQ+++G+ GL VA W N PP SIGFPGY+YP+ D +C Y Sbjct: 124 VLGNADLSYKYHFWDGACLPLGLGLSLILNGLFLARHMNRAGLLTLPDLWARKYGKAAEVIGGSVCIVSFCALLAGNLVGCGTILAFLFGVSLKEGILISGILMFLYTVCGGILSVAYSDIAQSTLGISGLA-VAGWWCFNHGHKAPPDSIGFPGYIYPDSFGDRVCSKY 292
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: B7GCN8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCN8_PHATC) HSP 1 Score: 184 bits (466), Expect = 8.340e-50 Identity = 92/187 (49.20%), Postives = 128/187 (68.45%), Query Frame = 2 Query: 5 LGNADLAYKFHYWDGAVLPMGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPND----DICEMYQ-VRLCMSALLCARRVK 550 LGNADL+YKF ++DGAV+P+GLGLSLI+NG+F+A H+N VLTLPD + K +G VEILVSL T SF+ LLAGNL G I +++G + +++IA + VYT +GGL SVAYTDV Q +G G +++A W + N E PPPSIG+P Y+YP++ +C+MY V ++A C ++ Sbjct: 142 LGNADLSYKFGFYDGAVIPIGLGLSLILNGIFLAHHVNNDEVLTLPDIFAKRYGKVVEILVSLTTICSFLMLLAGNLVGFGAITSYVWGISDTAAIWIAAGIVWVYTASGGLFSVAYTDVVQGLMGWSGCIVMAFWFIANEEPNAPPPSIGYPLYVYPDNIGDGGVCDMYDGVPCAVTADACCYNIE 328 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9319.18321.1 >prot_L-elsbetiae_contig9319.18321.1 ID=prot_L-elsbetiae_contig9319.18321.1|Name=mRNA_L-elsbetiae_contig9319.18321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFback to top mRNA from alignment at L-elsbetiae_contig9319:4287..6587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9319.18321.1 ID=mRNA_L-elsbetiae_contig9319.18321.1|Name=mRNA_L-elsbetiae_contig9319.18321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2301bp|location=Sequence derived from alignment at L-elsbetiae_contig9319:4287..6587+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9319:4287..6587+ >mRNA_L-elsbetiae_contig9319.18321.1 ID=mRNA_L-elsbetiae_contig9319.18321.1|Name=mRNA_L-elsbetiae_contig9319.18321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig9319:4287..6587+ (Laminarionema elsbetiae ELsaHSoW15)back to top |