mRNA_L-elsbetiae_contig9277.18284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 7.950e-14 Identity = 45/114 (39.47%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 88 NALHAAIQGGHEGVVSSLVDNGASLLLLEGAGKDALDIGGYA-PIYMAALYGHVAAALALMTGGADVSLRCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALHI 426 +ALHAA++ G+ VV++L+++GA + + + G L + P++ A L+GH+ +A ALM GA++++RCG K +VL AA + VDI+RA ++ GAD+ AV + ALH+ Sbjct: 3 SALHAAVRYGYAEVVTNLLEHGACVSIKDARGSTPLQVAAECTPLFGALLFGHLTSARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHV 116
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 2.060e-12 Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 1 Query: 1 AQLLKAPLQRAARQSNRGLA----QKLTRAGAKNALHAAIQGGHEGVVSSLVDNGAS--LLLLEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGGADVSLRCGEYKGSVLLAAAVRR-YVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQAR 495 A+ L+ PL+ AA N L +KL RAG A+ + + LV + S LLL +GA D LD G PI+++A G ++A AL+ G D SLR G+ + L A R +V++++A I G D+DA ++ TALH A + GAI+ L+EAGANI A+ Sbjct: 48 AEWLRTPLEHAAGAGNLDLVTKSYRKLRRAGTTTAIPLS-------TLLPLVASAISCPLLLRDGAEVDVLDTKGRTPIHLSAKRGSLSAVQALLAAGGDSSLRYGKGEAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIETLMEAGANIDAQ 212
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 4.880e-11 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 94 LHAAIQGGHEGVVSSLVDNGASLLLLEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGGADVSLRCGEYKGS--VLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDK--WGPHTSSLCCPLCASLAALLVPLRHGAHVNA 594 LH A G EG V++L+ GA K+ LD G P+++A GH++ AL+ D S+R + S VL AA + ++RA ++ G D++ R T+LH+A L N+ AIDVLVEAGA+++ D P + C C A L +HG+++ A Sbjct: 42 LHVAASQGQEGRVATLLAGGAK--------KNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDA-CINHCHEAALALY--KHGSNIEA 200
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 9.320e-11 Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 163 LLLEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGGADVSL--RCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDKWGPHTSSLCCPLCASLAALLVPLRHGAHVNA 594 LL EGA K+ LD G P+++A GH++ AL+ D S+ R SVL AA + ++RA ++ G D++ R T+LH+A L N+ AIDVLVEAGA+++ D C AAL + +HGA++ A Sbjct: 106 LLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALAL-FKHGANIEA 249
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5KSG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG6_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 3.160e-10 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 274 GADVSLRCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDK 501 GAD+SLR G+ S L AA+ VD++RA + G D++A + TALH N+AGAID LVEAGA++ AR + Sbjct: 58 GADLSLRSGDNNESALETAAINGDVDVVRAMVRHGVDVNARDSQGLTALHAVAESNQAGAIDALVEAGAHVNARGR 133
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.790e-9 Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 1 Query: 94 LHAAIQGGHEGVVSSLVDNGASLLLLEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGGADVSLRC--GEYKGSVLLAAAVRR-YVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDKWGPH--TSSLCCPLCASLAALLVPLRHGAHVN 591 LH A G+ VVS+L+ N + + DALD G +P+ +A+ GH + AL+ GAD++LR G + G + AV + +V +I A +E G ++ A TALH A A A+DVL++AGA++ A+ H T C + S A++ L+ G +VN Sbjct: 176 LHLAAASGNNRVVSTLLGNAMTDV-------DALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHA---RGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVN 336
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 2.130e-7 Identity = 69/211 (32.70%), Postives = 94/211 (44.55%), Query Frame = 1 Query: 19 PLQRAARQSNRGLAQKLTRAGA----------KNALHAAIQGGHEGVVSSLVDNGASLLLLEGAGKDALDIG--------GYAPIYMAALYGHVAAALALMTGGADVSLRCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDKWGP--HTSSLCCPLCASLAALLVPLRHGAHVN 591 PLQ AA + N Q L AGA +AL A+ G+ VV +++ + + + GK AL G P+++ A+ G AAA AL+ GADV+LR S G D++A + TAL +A +KA AIDVL EAGANI+A+ H +S L A +A L RHGA V Sbjct: 410 PLQMAAGEGNVAATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALL----RHGASVG 616
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A1F2VK43_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22 TaxID=1797188 RepID=A0A1F2VK43_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 9.560e-7 Identity = 40/118 (33.90%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 205 GYAPIYMAALYGHVAAALALMTGGADVSLRCGEYKGSVLLAAAVRR-----------YVDIIRAAIERGADMDAVRASQTTALHIAVLENKAGAIDVLVEAGANIQARDKWGPHTSSL 525 G P +AA G +L+ GAD L + +++LAA V R ++ ++ A+E GAD++A S TTALH A I +LVE G+ ++ARDKWG S+ Sbjct: 101 GATPFLLAAASGDAGTMRSLVQAGADPLLMTEDRTTALMLAAGVGRDDDRMKEEEEGALEAVKLALELGADLNATNRSGTTALHGAAFIGADSIIQLLVEKGSRLEARDKWGQTALSI 218
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 4.610e-6 Identity = 53/166 (31.93%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 1 AQLLKAPLQRAARQSNRGLAQKLTRAGAK--NALHAAIQGGHEGVVSSLVDNGASLLLLEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGG-------------------------ADVSLRCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTA 417 A++L+ PL+ AA Q N L QKL RAGA +ALHAA++ GH VV++L+++GA + + + G L + ADV++RCG K +VL AA + +VDI+RA ++ GAD+ AV + TA Sbjct: 47 AEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVDNDRDTA 212
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Match: A0A6H5I8Z6_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I8Z6_9HYME) HSP 1 Score: 56.6 bits (135), Expect = 4.890e-6 Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 169 LEGAGKDALDIGGYAPIYMAALYGHVAAALALMTGGADVSLRCGEYKGSVLLAAAVRRYVDIIRAAIERGADMDAVRASQTTALH----IAVLENKAGA------------IDVLVEAGANIQARDKWGPHT-SSLCCPLCASLAALLVPLRHGAHVNAL 597 LE A K+ D GY ++ A + G+ AA L+ GADV C YK S L AAA ++ D++ +E GAD + +T LH + + E ++ + +LVEAGA+I+AR++ G + L LA +L L+HGA +++L Sbjct: 130 LESARKNHCDEQGYTYLHAACVAGNATAARKLLRRGADVD--CDSYKYSALQAAAWYKHEDVVEVLLEAGADPNRPDVEGSTPLHSLSWLCLCECESSRRYCDKRKPVERIVRMLVEAGADIEARNRHGDTALQASVSRLDVELARVL--LKHGASLSSL 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9277.18284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9277.18284.1 >prot_L-elsbetiae_contig9277.18284.1 ID=prot_L-elsbetiae_contig9277.18284.1|Name=mRNA_L-elsbetiae_contig9277.18284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=199bp AQLLKAPLQRAARQSNRGLAQKLTRAGAKNALHAAIQGGHEGVVSSLVDNback to top mRNA from alignment at L-elsbetiae_contig9277:1199..1880+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9277.18284.1 ID=mRNA_L-elsbetiae_contig9277.18284.1|Name=mRNA_L-elsbetiae_contig9277.18284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=682bp|location=Sequence derived from alignment at L-elsbetiae_contig9277:1199..1880+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9277:1199..1880+ >mRNA_L-elsbetiae_contig9277.18284.1 ID=mRNA_L-elsbetiae_contig9277.18284.1|Name=mRNA_L-elsbetiae_contig9277.18284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1194bp|location=Sequence derived from alignment at L-elsbetiae_contig9277:1199..1880+ (Laminarionema elsbetiae ELsaHSoW15)back to top |