mRNA_L-elsbetiae_contig9130.18159.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI) HSP 1 Score: 310 bits (794), Expect = 8.290e-98 Identity = 209/356 (58.71%), Postives = 238/356 (66.85%), Query Frame = 3 Query: 39 MSNFDDGMFDFGDDDDADSFLTGKLAALGIDEDLELSGGEEENEDPAGGGTSPADLSSAPAAEVVSSP-------APGRVPTEDRGQPPAATEAQGEAP-QPVSPA-------------VRSSAGXXXXXXXXEEGSGEAIEEGELLEMLKKPLQASRGRPQQHGSRDNSRSGRIDGSGGXXXXXXXXXXXXXXXXXSNGRAHGRNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANKRKAEAALAGEDVMTPRDPPRXXXXXXXXXXXXXSARAARDMGTWVGPGA 1043 MS FDD DFG DDD D FLTGKLAALGIDEDLELSGGEEE+++ A AD S+ P V SP A VP R PA + G P + SP R + G G A+E+GEL++M+ +PL+ SRGR Q RS R G GG XXXXXXXX +G+A GRNVTI ECA W+C+RL EPKYYLMCQVVSTIGY K+R LLE VQ+TQ+ GGMPTADGSRKRTAGGVFFTLLK+HMEP++LKELYADE+RVKKE+DRARR+ANKRKAEAALAGEDVMTPR+PPR XXXXXXXXX + RA RDMG W GP A Sbjct: 1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSNKPPGIVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGRGTAVEDGELVQMIDQPLRTSRGREQ--------RSARDSGRGGGXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXXX--ATRAGRDMGKWAGPTA 346
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A835ZKK4_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKK4_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.530e-20 Identity = 49/100 (49.00%), Postives = 72/100 (72.00%), Query Frame = 3 Query: 597 TISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANK 896 T+ + AI +C++LDEPKYYLMCQVV +G+ K+ LL++ Q + GG+ TADG R+R+ GGVF TLL++ + P K+K +YA++ RV+K R R R+ K Sbjct: 165 TVKDAAIRLCEQLDEPKYYLMCQVVWHLGFNKTNRLLKQTVQIERDGGLRTADGKRRRSPGGVFLTLLRDAVTPEKMKAIYAEDKRVQKLRARTVRAMRK 264
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.500e-12 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 633 LDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELY-ADEIRVKKERDRARRSANKRKAEAALAGEDV 932 LDE L+ + + IG K ++ LL+RV +TQ GG+ TADGSRKRT GGVFF LL++ M P K+L AD R K+E + R+ KR E G D Sbjct: 95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRDGGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDA 195
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT) HSP 1 Score: 70.1 bits (170), Expect = 1.830e-9 Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 3 Query: 621 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKE--HMEPAKLKELYADEIRVKKERDRARRSA-NKRK 902 + +RL+E K+ L+ + V IG KK+ L +Q Q GGM T +GSR+RT+GGVF TLLK + ++KE++ D++ +KKE + +++A N+RK Sbjct: 166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLNGGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKEALKRKKAAYNQRK 262
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A9TJL2_PHYPA (Phosphorylated adapter RNA export protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TJL2_PHYPA) HSP 1 Score: 69.7 bits (169), Expect = 3.990e-9 Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 588 RNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRAR 881 + V I + C R++E KY L + V IG + +GLL +V Q GG TADG R+R+AGGV + LL++H+ P KE+ + R E+ +A+ Sbjct: 113 KTVIIERFVVQTCRRIEETKYPLFREAVDRIGIEAMKGLLNQVDAIQKCGGQMTADGLRRRSAGGVLWNLLRDHVGPVLYKEIMKEGNRKHIEQQKAK 210
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-8 Identity = 35/84 (41.67%), Postives = 57/84 (67.86%), Query Frame = 3 Query: 621 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKE--HMEPAKLKELYADEIRVKKE 866 + +RL+E K+ L+ + V IG KK L + ++ Q +GGM T +GSR+RT+GGVFFTLLK + ++KE++ +++ +KKE Sbjct: 146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQLSGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: Q017X4_OSTTA (Phosphorylated adapter RNA export protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q017X4_OSTTA) HSP 1 Score: 65.9 bits (159), Expect = 3.710e-8 Identity = 39/120 (32.50%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 588 RNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANKRKAEAALAGEDVMTPRD 947 R S A + LDEPK L+ + + +G R E TQ GG TA+G RKRT GG+F+++++ ++ E++A+E +KER +ARR+ + A G++ + P D Sbjct: 94 RGADASRSARELAQALDEPKVRLLARAIDALGESTCRAYAEEAVATQRNGGELTANGERKRTTGGIFWSIVRARVDKETYDEIFAEERERQKERVKARRARQR-----AADGKENVPPAD 208
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER) HSP 1 Score: 63.9 bits (154), Expect = 1.230e-7 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 621 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLK 803 + +RL EPK +L+ +VV +G ++R LL + + AGG+ T DGSR+RTAGGVFF LLK Sbjct: 134 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 194
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A293M5C7_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M5C7_ORNER) HSP 1 Score: 63.9 bits (154), Expect = 2.530e-7 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 621 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLK 803 + +RL EPK +L+ +VV +G ++R LL + + AGG+ T DGSR+RTAGGVFF LLK Sbjct: 223 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 283
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A426U3M5_9CHLR (Phosphorylated adapter RNA export protein n=1 Tax=Candidatus Viridilinea halotolerans TaxID=2491704 RepID=A0A426U3M5_9CHLR) HSP 1 Score: 63.5 bits (153), Expect = 3.640e-7 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 576 RAHGRNVTISECAIWMCDRLDEP---KYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHM 812 R HG T A + DRLDE + ++ ++V+ IG K++ +L+ Q + GGMPT DG+R+RT GG+FF L+KE + Sbjct: 119 RRHGSTFTPDFIAAMIADRLDETEGERSLVVWRIVAHIGVKRAWAVLKETLQIEAQGGMPTEDGTRQRTLGGIFFFLIKEQI 200 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9130.18159.1 >prot_L-elsbetiae_contig9130.18159.1 ID=prot_L-elsbetiae_contig9130.18159.1|Name=mRNA_L-elsbetiae_contig9130.18159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=337bp MSNFDDGMFDFGDDDDADSFLTGKLAALGIDEDLELSGGEEENEDPAGGGback to top mRNA from alignment at L-elsbetiae_contig9130:1080..3698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9130.18159.1 ID=mRNA_L-elsbetiae_contig9130.18159.1|Name=mRNA_L-elsbetiae_contig9130.18159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2619bp|location=Sequence derived from alignment at L-elsbetiae_contig9130:1080..3698+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9130:1080..3698+ >mRNA_L-elsbetiae_contig9130.18159.1 ID=mRNA_L-elsbetiae_contig9130.18159.1|Name=mRNA_L-elsbetiae_contig9130.18159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2022bp|location=Sequence derived from alignment at L-elsbetiae_contig9130:1080..3698+ (Laminarionema elsbetiae ELsaHSoW15)back to top |