mRNA_L-elsbetiae_contig9008.18030.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 3.270e-23 Identity = 55/106 (51.89%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 109 EHKNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPGSD--------------RVPVVRALHLTWAISTGRLFQGAA 384 E R DA + + QACEGG K W+ ST ELQL SL+ C ACRS PTL VRV P SLWSPP RVPVVRAL LTWA S L Q AA Sbjct: 4 EGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAA 109
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 100 bits (248), Expect = 5.360e-22 Identity = 54/106 (50.94%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 109 EHKNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSP------PG--------SDRVPVVRALHLTWAISTGRLFQGAA 384 E + RC+DA + + QACEGG K W+ STLELQL SL+ C ACR+ L V V+D PRSLWS P S RVPVVRAL LTWA+S L + AA Sbjct: 6 EWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAA 111
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.710e-20 Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 115 KNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPGS--------------DRVPVVRALHLTWAISTGRLFQGAA 384 ++ C+ A V ++Q C G K W+ STLELQLVSLEFC ACR VPTL VRV+ PRSLWSP S +RVP V+A LTWA+ L Q +A Sbjct: 14 RSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSA 117
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 5.890e-20 Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 118 NRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPG--------------SDRVPVVRALHLTWAISTGRLFQGAA 384 ++C+DA V ++QAC+G K W+VSTLELQLVSLE C ACR V TL VRV+ P SLW P S RVPVV+A LTWA+ G L Q +A Sbjct: 7 SKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSA 109
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-19 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 115 KNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSP 300 +++C+DA V ++Q C+G K W+ STLELQLVSLEFC ACR VPTL VRV+ PRSLWSP Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSP 99
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 8.560e-17 Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 127 VDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPGS--------------DRVPVVRALHLTWAISTGRLFQGAA 384 +D L V ++QAC+G K W+VSTLELQLVSLE C ACRS L V V + P +LWS S +RVP V+AL TWA+ RL Q AA Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAA 189
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5JHB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 8.790e-16 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 118 NRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPP--GSDRVPVVRALHLTW 348 +RC+DA + + QA G W+ STL+LQ V L CSACRSVPT VR++D P SLW P S RVPVV L LTW Sbjct: 141 SRCLDAFAITLHQAYGGRRGHWYKSTLQLQCVCLALCSACRSVPTWHVRIDDQTPHSLWDPNVRTSSRVPVVLGLRLTW 219
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 4.050e-15 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 115 KNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPGSDRVPVVRALHLTWAISTGRLFQGAA 384 + CVDA V +++ C+GG + W+ STLELQ VSLEFC ACR VPT S L S G R PVVRA LTWA+S L Q A Sbjct: 16 RGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH---STSTVGRLVS--GVSRAPVVRAYSLTWALSMDVLLQSCA 100
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5JJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW8_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.360e-14 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 166 GGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPP--GSDRVPVVRALHLTW 348 GGG W+ STL+LQ VSL CSACRSVPTL VR++ P SLW P S RVPVV AL LTW Sbjct: 128 GGGGHWYKSTLQLQCVSLALCSACRSVPTLHVRIDGQAPHSLWDPNVRTSSRVPVVLALRLTW 190
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.400e-14 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 94 HRSMGEHKNRCVDALFVVMDQACEGGGKCWFVSTLELQLVSLEFCSACRSVPTLRVRVEDSLPRSLWSPPGS--------------DRVPVVRALHLTWAI 354 H+ +G ++ C+DA V + QA +G K W+VSTLELQLVSLEFC ACRS + V++ P SLWSP S RVP V+A WA+ Sbjct: 21 HQGLG--RSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWAL 119 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9008.18030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9008.18030.1 >prot_L-elsbetiae_contig9008.18030.1 ID=prot_L-elsbetiae_contig9008.18030.1|Name=mRNA_L-elsbetiae_contig9008.18030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MLRATSQWHTDIPTRPVRASGAETEILLRGVHRSMGEHKNRCVDALFVVMback to top mRNA from alignment at L-elsbetiae_contig9008:852..2216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9008.18030.1 ID=mRNA_L-elsbetiae_contig9008.18030.1|Name=mRNA_L-elsbetiae_contig9008.18030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1365bp|location=Sequence derived from alignment at L-elsbetiae_contig9008:852..2216- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9008:852..2216- >mRNA_L-elsbetiae_contig9008.18030.1 ID=mRNA_L-elsbetiae_contig9008.18030.1|Name=mRNA_L-elsbetiae_contig9008.18030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig9008:852..2216- (Laminarionema elsbetiae ELsaHSoW15)back to top |