mRNA_L-elsbetiae_contig90.18014.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE) HSP 1 Score: 172 bits (437), Expect = 6.830e-51 Identity = 110/203 (54.19%), Postives = 137/203 (67.49%), Query Frame = 1 Query: 1 MQRLGWSAKRCGRRNLT-HTLS--RLSSSSTGSEHDDFWTEAQTEAKTTPAYQQAA-RASSDTP-SRFVDGDQWAAPGNFGPGRMPMGQAYGPSTS----GDRNNSGPPPFTPSTNTLDPHQRHL--PEPPFDMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREIEQ 576 MQR G SA+R G +L H+ S +LSS S+G EHDDFWT A+TEA+ TPAYQQAA A++ TP + GD+WA PG PG MPMG+AY PS+S G R++S S+NT + P P FDM SS HLSPV+QVDVR+FKG LVDIRQYF+ +G+ TKKG ALT+PQWRRLQ AM DID ++ +E+ Sbjct: 1 MQRFGVSARRRGFPSLLIHSSSSRKLSSFSSGPEHDDFWTAAKTEAQATPAYQQAAANATAPTPWTPTATGDRWAQPGGPSPGTMPMGEAYKPSSSSKMYGGRSSSS---NGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEE 200
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.160e-22 Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 367 MLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREIEQ 576 M SSMHLSPV+Q DVR FKG LVDIRQYF+ +G+ + TKKG ALT+PQWRRLQ AM DID ++ +E+ Sbjct: 1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEE 70
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE) HSP 1 Score: 64.7 bits (156), Expect = 3.030e-10 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 385 LSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKL 561 LS + V+VRTFKG +++DIR+Y+ NDDG KKG +L+V QW +L+ AM ID ++ Sbjct: 51 LSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A7M7G0M9_STRPU (PC4 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7G0M9_STRPU) HSP 1 Score: 63.9 bits (154), Expect = 6.380e-10 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 364 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 D LS + V+VR F+G VL+DIR+Y++ + G + KKG +LTV QWR+L + + DIDS++ E+ Sbjct: 46 DTSEMFSLSRQRFVNVREFRGKVLIDIREYYEKEVGDLLPGKKGISLTVDQWRKLVSQVDDIDSRIEEM 114
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: UPI001455409E (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455409E) HSP 1 Score: 63.5 bits (153), Expect = 1.070e-9 Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 382 HLSPVKQ---VDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 H+ P+ + V+VR F+G VL+DIR+Y+ ++ G + KKG +LTV QW +L+ AM D++ +RE+ Sbjct: 57 HMYPLARQRFVNVREFRGKVLIDIREYYTDNSGELKPGKKGISLTVEQWEKLKDAMEDVNDSVREL 122
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A1B6KUG9_9HEMI (PC4 domain-containing protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KUG9_9HEMI) HSP 1 Score: 62.0 bits (149), Expect = 2.570e-9 Identity = 26/69 (37.68%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 364 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 D + S H+ +K + VRTFKG V +DIR+Y++ + G + KKG +LT PQW+++ + D++ L+++ Sbjct: 36 DDIESFHIEGMKYLKVRTFKGKVFIDIREYYEAN-GDLKPGKKGISLTAPQWKKVVGLVDDVEEALKKV 103
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A8C5L2B5_JACJA (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5L2B5_JACJA) HSP 1 Score: 62.4 bits (150), Expect = 3.210e-9 Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 394 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 +K V VR FKG VL+DIR+Y+ N DG + +KG AL+ QW +L+ + DID +R++ Sbjct: 69 MKYVSVREFKGNVLIDIREYWMNQDGEMKPGRKGIALSPEQWSQLKEQISDIDDAVRKL 127
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: UPI001BB2BB0F (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2BB0F) HSP 1 Score: 61.6 bits (148), Expect = 4.360e-9 Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 364 DMLSSMHLSPVKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 D + LS + V+VR F+G VL+DIR+Y++ + G + KKG +LTV QWR+L + DID+++ E+ Sbjct: 42 DTSNMFSLSRQRFVNVREFRGKVLIDIREYYEPEVGDLRPGKKGISLTVDQWRKLVNQIDDIDARIEEM 110
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: A0A4Z2EKN8_9TELE (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2EKN8_9TELE) HSP 1 Score: 61.6 bits (148), Expect = 6.130e-9 Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 394 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 ++ V VR FKG VLVDIR+Y+ N DG + KKG +L QW +L+ M DID ++ I Sbjct: 68 MRYVSVREFKGKVLVDIREYWMNQDGEMKPGKKGISLNPEQWTQLKDQMSDIDEAMKRI 126
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Match: G3NII5_GASAC (Activated RNA polymerase II transcriptional coactivator p15 n=3 Tax=Gasterosteidae TaxID=69291 RepID=G3NII5_GASAC) HSP 1 Score: 61.6 bits (148), Expect = 7.150e-9 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 394 VKQVDVRTFKGTVLVDIRQYFKNDDGRISATKKGAALTVPQWRRLQAAMGDIDSKLREI 570 ++ V VR FKG VL+DIR+Y+ N DG + KKG +L QW +L+ M DID ++ I Sbjct: 75 MRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQMSDIDDAMKRI 133 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig90.18014.1 >prot_L-elsbetiae_contig90.18014.1 ID=prot_L-elsbetiae_contig90.18014.1|Name=mRNA_L-elsbetiae_contig90.18014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp MQRLGWSAKRCGRRNLTHTLSRLSSSSTGSEHDDFWTEAQTEAKTTPAYQback to top mRNA from alignment at L-elsbetiae_contig90:42404..42979- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig90.18014.1 ID=mRNA_L-elsbetiae_contig90.18014.1|Name=mRNA_L-elsbetiae_contig90.18014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig90:42404..42979- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig90:42404..42979- >mRNA_L-elsbetiae_contig90.18014.1 ID=mRNA_L-elsbetiae_contig90.18014.1|Name=mRNA_L-elsbetiae_contig90.18014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig90:42404..42979- (Laminarionema elsbetiae ELsaHSoW15)back to top |