mRNA_L-elsbetiae_contig803.17017.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: D7FPP2_ECTSI (Ankyrin repeat domain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP2_ECTSI) HSP 1 Score: 132 bits (331), Expect = 5.730e-35 Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 2 Query: 89 HGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGADAHIPDLSAARHTPLEAAVVSGYR 310 HGH VIELLL+HGADV AREAWAGRTPLH ACQ+GSLKAA ALI+KGGAD H+PDLSAARHTPLEAAVVSGYR Sbjct: 120 HGHAEVIELLLRHGADVTAREAWAGRTPLHYACQAGSLKAATALIIKGGADPHVPDLSAARHTPLEAAVVSGYR 193
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A1L7WPQ7_9HELO (Uncharacterized protein n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7WPQ7_9HELO) HSP 1 Score: 60.1 bits (144), Expect = 2.520e-8 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 2 Query: 17 LLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQS 193 LL +G + NE ETPLH+A GHE V+ LLLKH ADV A++ GRTPLH A +S Sbjct: 590 LLSDGFEANENSGSYETPLHRAVIRGHEDVVILLLKHRADVNAKDI-VGRTPLHYAMES 647
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A1W0A931_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A931_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.690e-8 Identity = 29/77 (37.66%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 5 IMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGG 235 +++ LL++G++ NE+ ETPLH A+ G++ +I+LLL++GAD + +G TPLH + G + A++ L++ GG Sbjct: 27 LVEALLRDGVNVNERNSLGETPLHLAAGRGYDEIIDLLLRYGADPHVHDWESGYTPLHRSLLQGHINASL-LLLNGG 102
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A024U6F7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6F7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 8.780e-8 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AIMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGA 238 A+ ++L G+ +E+ ETPLH A+ G EG+++LLL+HGAD A++ +G TPLH + G + A++ L++ GGA Sbjct: 29 AVERLLEDGGVLVDERNNLGETPLHIAASRGLEGLVDLLLRHGADPNAQDEESGYTPLHRSFLHGHVDASL-LLLNGGA 106
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A3E2HFL0_SCYLI (Uncharacterized protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HFL0_SCYLI) HSP 1 Score: 58.2 bits (139), Expect = 1.140e-7 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 2 AIMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLL-KHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGADAHIPD 256 I+Q+LLK G+D NE+ R T LH A+ G +GV+ LL+ K + + +W RTPLH A + V L+V+ GAD I D Sbjct: 284 GIVQLLLKKGVDANERDDRGWTALHWATSLGWKGVVRLLIRKENVEKNCQASWDRRTPLHLAAAESN-PTLVKLLVESGADVDICD 368
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A2I2FD85_9EURO (Ankyrin repeat-containing domain protein n=1 Tax=Aspergillus candidus TaxID=41067 RepID=A0A2I2FD85_9EURO) HSP 1 Score: 57.4 bits (137), Expect = 1.750e-7 Identity = 36/100 (36.00%), Postives = 52/100 (52.00%), Query Frame = 2 Query: 5 IMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGADAHIPDLSAARHTPLEAAVVSG 304 ++ +LL NG D + +G TPL A GH G+I+ L++ GA++ A+ +G T LH Q G + L+V GAD +I A PL A SG Sbjct: 52 LIHLLLANGADIDARGPDGATPLMFAVAQGHHGLIQHLVRGGANLNAQTTTSGGTALHVVAQHGLEVTTLQLLVDHGADINIRCHQPAGEVPLHRAAFSG 151
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: UPI001EE580A7 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE580A7) HSP 1 Score: 55.1 bits (131), Expect = 1.390e-6 Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 2 AIMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGADAHIPDLSAARHTPLEAAVVSGYR 310 + IL + +D N +G ++TP+ A GH+GV+ELL+K GAD++ +G LH AC SG ++ D I + TP+ AA V G++ Sbjct: 111 VVKYILSQEMVDINSRGYGKKTPVMVAGEEGHKGVVELLVKFGADLSLNGK-SGSNILHYACSSGQFDVVKYVLSLNEVD--IDSRGWKKRTPVMAAAVKGHK 210
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: A0A6I9Z0V4_9SAUR (ankyrin repeat domain-containing protein 27-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9Z0V4_9SAUR) HSP 1 Score: 53.5 bits (127), Expect = 2.660e-6 Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 2 Query: 17 LLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREA-WAGRTPLHCACQSG 196 L NGL N TPLH A+ HGH ++ LLLKHGA++ A++ AG PLH ACQ+G Sbjct: 119 LPSNGLGVNVTNQTGLTPLHVAALHGHVDLVALLLKHGANIEAKDVNQAG--PLHFACQNG 177
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: UPI001EE50034 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE50034) HSP 1 Score: 53.9 bits (128), Expect = 3.410e-6 Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 2 AIMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSG 196 + +L +D N +G+++ TPL A+ GH+ V+ELL+KHGAD+ R+ G LH AC G Sbjct: 178 VVKYLLSLTSVDINSRGLQKRTPLMVAAEQGHKEVVELLVKHGADLFLRDEH-GDNALHRACYPG 241
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Match: UPI001EE542BC (ankyrin repeat domain-containing protein 50-like n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE542BC) HSP 1 Score: 53.1 bits (126), Expect = 6.440e-6 Identity = 29/103 (28.16%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 2 AIMQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWAGRTPLHCACQSGSLKAAVALIVKGGADAHIPDLSAARHTPLEAAVVSGYR 310 + +L N +D N +G ++ TP+ A G + ++ELL+KHGAD++ R AG L+ AC+ G ++ ++ D + + + TP+ A G++ Sbjct: 312 VVKYLLSLNSVDINSRGYKKRTPVMTAGERGKKKIVELLVKHGADLSHRAPLAGNI-LNLACRGGKIEVVKYVLSLNTVDINTRGIK--KRTPVMIAAAHGHK 411 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig803.17017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig803.17017.1 >prot_L-elsbetiae_contig803.17017.1 ID=prot_L-elsbetiae_contig803.17017.1|Name=mRNA_L-elsbetiae_contig803.17017.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp MQILLKNGLDPNEKGIRRETPLHQASRHGHEGVIELLLKHGADVAAREAWback to top mRNA from alignment at L-elsbetiae_contig803:1052..1965+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig803.17017.1 ID=mRNA_L-elsbetiae_contig803.17017.1|Name=mRNA_L-elsbetiae_contig803.17017.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=914bp|location=Sequence derived from alignment at L-elsbetiae_contig803:1052..1965+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig803:1052..1965+ >mRNA_L-elsbetiae_contig803.17017.1 ID=mRNA_L-elsbetiae_contig803.17017.1|Name=mRNA_L-elsbetiae_contig803.17017.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=606bp|location=Sequence derived from alignment at L-elsbetiae_contig803:1052..1965+ (Laminarionema elsbetiae ELsaHSoW15)back to top |