mRNA_L-elsbetiae_contig7999.16971.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7999.16971.1
Unique NamemRNA_L-elsbetiae_contig7999.16971.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Match: D7FXL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL9_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 7.310e-42
Identity = 101/165 (61.21%), Postives = 118/165 (71.52%), Query Frame = 1
Query:  889 VEPIPGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLILKDIQKHTGTTATLISLPRTGS--GGSGEGAAVTVNAAAGRPEESDGR---QAAPAGNGD-DSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSPHRRLT 1365
            V PIPGPLPSAE+SEE +RLPASV+ VL GQ K +SG G+        V +WLILKDIQKHTGTTAT IS+PR G+  G +G G A   NA+A +  E       +A P    D D+ E LVLL++GP NCVEVAAEALRKLGR ETVR+ L+FVKTTSPHRRLT
Sbjct:    2 VVPIPGPLPSAERSEEIVRLPASVIPVLKGQAKSKSGNGLV-------VARWLILKDIQKHTGTTATAISVPRAGADEGRAGTGKA---NASATKMTEDAAESTAEATPTAVADGDADEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKTTSPHRRLT 156          
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Match: A0A6H5L596_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L596_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 9.280e-32
Identity = 239/464 (51.51%), Postives = 264/464 (56.90%), Query Frame = 1
Query:    1 EVDTAAVAEFPLHVCRHPLVVGARGATLKRISAEAAVRIAVPSEREAXXXXXXXXXXXXXXXXXXXXLLDKNLVIQLEGEVGALFYSLAMIIEAVYGF--RVAGAH-PXXXXXXXXXXXXXXXXXXXXDGTDVTVVV--QAPYSASPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAPQINARRPASLAASXXXXXXXXXXXXXXXXXXXXXXGVEPIPGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLILKDIQKHTGTTATLISLPRTGS----GGSGEGAAVTVNAAAGRPEESDGRQAAPAGNGDDSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSPHRRLT 1365
            +VDTAAVAEFPLH+ RHP++VG +GATLKRISA  AVRI VPSE+EAXXXXXXXXXXXXXXXXXX  L DKNLV+Q+ GE         M+ EA  G    V  +H P  XXXXXXXXXXXXXXXXXX     TV    Q P    PG                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         N + P     +            XXXXX      V PIPGPLPS E+SEET+RLPASV+ VL GQ K + G G+        V +WLILKDIQKHTGT AT IS+PR G+    GG+                                 E LVLL++GP NCVEVAAEALRKLGR ETVR+ L+FVK TSPHRRLT
Sbjct:   92 QVDTAAVAEFPLHLSRHPIIVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXS-LRDKNLVVQVRGEG----MRHTMVTEAQRGVPQAVGWSHAPAAXXXXXXXXXXXXXXXXXXXXXXXTVANKRQQPAKQEPGQGHSRPPPTEIGTPSPAQQGTGARGKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------NTQWPTPPRQAGEAMPEESPKQQXXXXXQGQM--VIPIPGPLPSTERSEETVRLPASVIPVLKGQAKSKPGNGLV-------VARWLILKDIQKHTGTRATAISVPRAGADGGRGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKKTSPHRRLT 500          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXL9_ECTSI7.310e-4261.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L596_9PHAE9.280e-3251.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7999contigL-elsbetiae_contig7999:2422..9085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2136
Cds size2136
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816883.5643222-CDS-L-elsbetiae_contig7999:2421..25891622816883.5643222-CDS-L-elsbetiae_contig7999:2421..2589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 2422..2589 -
1691683885.2747517-CDS-L-elsbetiae_contig7999:2421..25891691683885.2747517-CDS-L-elsbetiae_contig7999:2421..2589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 2422..2589 -
1622816883.5747857-CDS-L-elsbetiae_contig7999:3122..34951622816883.5747857-CDS-L-elsbetiae_contig7999:3122..3495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 3123..3495 -
1691683885.286101-CDS-L-elsbetiae_contig7999:3122..34951691683885.286101-CDS-L-elsbetiae_contig7999:3122..3495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 3123..3495 -
1622816883.585784-CDS-L-elsbetiae_contig7999:4184..43661622816883.585784-CDS-L-elsbetiae_contig7999:4184..4366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 4185..4366 -
1691683885.2947333-CDS-L-elsbetiae_contig7999:4184..43661691683885.2947333-CDS-L-elsbetiae_contig7999:4184..4366Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 4185..4366 -
1622816883.596082-CDS-L-elsbetiae_contig7999:4991..51771622816883.596082-CDS-L-elsbetiae_contig7999:4991..5177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 4992..5177 -
1691683885.3095036-CDS-L-elsbetiae_contig7999:4991..51771691683885.3095036-CDS-L-elsbetiae_contig7999:4991..5177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 4992..5177 -
1622816883.6057966-CDS-L-elsbetiae_contig7999:6051..62111622816883.6057966-CDS-L-elsbetiae_contig7999:6051..6211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 6052..6211 -
1691683885.3218-CDS-L-elsbetiae_contig7999:6051..62111691683885.3218-CDS-L-elsbetiae_contig7999:6051..6211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 6052..6211 -
1622816883.615602-CDS-L-elsbetiae_contig7999:6825..76641622816883.615602-CDS-L-elsbetiae_contig7999:6825..7664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 6826..7664 -
1691683885.3316042-CDS-L-elsbetiae_contig7999:6825..76641691683885.3316042-CDS-L-elsbetiae_contig7999:6825..7664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 6826..7664 -
1622816883.625732-CDS-L-elsbetiae_contig7999:8857..90851622816883.625732-CDS-L-elsbetiae_contig7999:8857..9085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 8858..9085 -
1691683885.343266-CDS-L-elsbetiae_contig7999:8857..90851691683885.343266-CDS-L-elsbetiae_contig7999:8857..9085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7999 8858..9085 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7999.16971.1prot_L-elsbetiae_contig7999.16971.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7999 2422..9085 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7999.16971.1

>prot_L-elsbetiae_contig7999.16971.1 ID=prot_L-elsbetiae_contig7999.16971.1|Name=mRNA_L-elsbetiae_contig7999.16971.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=712bp
EVDTAAVAEFPLHVCRHPLVVGARGATLKRISAEAAVRIAVPSEREAAAQ
QQQQQQGWSSSSSSSSSLLDKNLVIQLEGEVGALFYSLAMIIEAVYGFRV
AGAHPPPPPPPTAAAATAAAAAAPTDGTDVTVVVQAPYSASPGATAVVVA
AGAALGSGGESSAAGAGAGAAIAPTEQRSARRGKAQQQQQQQQQQQDAQV
SARAAAAAATAAAFPAGGVAAAAIHSVTRGAVDGGSQQKQQQQQQQQQQQ
QQQQQQAGAPQINARRPASLAASAQQQAKAVLDQSPQQQQQQQQQGVEPI
PGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLI
LKDIQKHTGTTATLISLPRTGSGGSGEGAAVTVNAAAGRPEESDGRQAAP
AGNGDDSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSP
HRRLTRGRRLEQQQQQQQQQQSSDGTAARDQQHDTIGGGPNNISSNDSSS
SNNNNNDNGRALPHHPPRQVYSAAAAAASAVSQPASETRDGGGGGGGGGG
SKKRHAQQPCGSSRGGGGGRGGTEREPAHHRSGGGGKPEREAKGGGAGAG
SGSGSGSGPGRGKGRGHGSRESKPQPRATSRDSPPPPPQQQQQQQQQQQQ
AAGGQSAPRSSSIKPPPRKGRRTGAPRGGGEGSKPGATQPAPGGRAGVKS
GSRDEHGQQRG*
back to top

mRNA from alignment at L-elsbetiae_contig7999:2422..9085-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7999.16971.1 ID=mRNA_L-elsbetiae_contig7999.16971.1|Name=mRNA_L-elsbetiae_contig7999.16971.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6664bp|location=Sequence derived from alignment at L-elsbetiae_contig7999:2422..9085- (Laminarionema elsbetiae ELsaHSoW15)
GAGGTGGACACGGCGGCCGTGGCGGAGTTCCCCCTCCACGTCTGCCGGCA CCCGCTGGTGGTGGGGGCGAGGGGGGCGACGCTGAAGCGCATCAGCGCGG AGGCCGCGGTCCGCATCGCCGTGCCGTCGGAGAGGGAGGCGGCAGCGCAG CAGCAGCAGCAGCAGCAAGGGTGGTCGTCGTCGTCGTCGTCGTCGTCGTC CTTGTTGGATAAGAACCTCGTCATCCAGGTGAATAAATGTACCGCAGGAA GGGGTACCCCCCTCCTCCCTCCTGTGTGACCCCGGTTGGGTCGTCTCGCT AGTCGTAGTGGAGGAAGGGGAGGGGGCCAGTGGGGCAGACGACGAACAAC CCAATAATGGGAGGGAAAAAAAGAAAAAAAATGTTACTTAAGTATGTAAA TAAGCAATACTATTGTATGTAAGCACTTCTACATACGTATGCATACGAAG TATTTATTTTTTATTTTTTATTTTTTTAGGCATTTATTACTTCAAAATAC ACAGTTTTTTTTTGCTCTTTTTGCACGACATGCAGGCGTGAAAATCTCGG TCGGTGCGTTTGCTCTGGACGAAGCGTTGCCCTGTGCGCGCGCGTGTGTG CGTGCGTGCGTGGTGTTTTCAGGCTCGTTTTGGTGGGGGGAGGGGTCGCC ACATATTTAGGAGAAAACGTGCGCGCAGGCAGCTTGGTATGTACACCATG TCCTGCATACGCCGAAGCTGAAGCTTGAGTCTGAGCCGATGGAGGCCCAG GGCCGAGTGCAGACAGCCGTGTTTGTTGTGCGAACTTGGGGGTCGGACCA CACACAACTCTTTCCGTGCGCCGCCCCCTCCCTCTTCTCTACCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCGGCCCTCTTTCTTCCTTGCCCACACACC GCCTACCCCCCCCCNNNNNNNNNNTTTTGTTGTGTCGAATTGGGGGGGGG ACCCCACCCCCCCCTTTCCGCGCGCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCGCGCACGCGTGCCTATTTTCTCATCTCGCAAAATCCCGA TTTGCTCCATCCGGTGTCTTCGCAGATGGAAAGATCTAGATATGCCCATC GTTCCCGTGCAATGATCTTTGTGTGTGTGTGTGTGTATAGGGGGGGGGGT GCCAACTCAGGACTTTCAGTCGCGCAGGAAGGAATCCAGAAGAGGTCTCT GGCGAGAGGTCGGGCTTTTTTACAGAGGCTGTCTAAGCGGTGGTCGAGCT TTGACCTGAGCTATTGTTGTGGTGGACCAAGACGCATTTCCCCTCCGCTA CTCCTGTCTTAACCTCTCCCCACCGATCGCCCCCCCCCCCCCCCCCCAAC CTGCCTAACGATGCTGTGCTGTGGCGACTTACTTTGGCGCCGGCCCGAAC GGGTCACCTCTTAAATAACAGCTGGAAGGCGAGGTGGGGGCTTTGTTCTA CTCGCTGGCCATGATCATCGAGGCGGTATACGGCTTCCGAGTCGCCGGCG CCCATCCACCTCCTCCGCCTCCTCCAACAGCCGCCGCCGCCACCGCCGCC GCCGCCGCCGCCCCGACCGACGGCACGGACGTCACGGTGGTGGTGCAGGC CCCGTACTCTGCTTCTCCTGGTGCCACTGCTGTGGTTGTTGCTGCGGGCG CTGCGTTGGGGTCTGGTGGCGAATCGTCGGCGGCGGGGGCGGGGGCGGGG GCGGCGATTGCGCCAACTGAGCAGAGATCAGCCAGGCGCGGGAAAGCGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGATGCGCAGGTCAGCGCGA GAGCCGCTGCTGCTGCCGCCACCGCCGCCGCATTTCCGGCCGGAGGCGTG GCGGCAGCCGCGATTCACTCCGTTACGCGAGGTGCGGTTGATGGTGGATC GCAGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGGCGGGCGCTCCCCAGATCAACGCGCGGCGACCCGCTTCT TTGGCAGCATCGGCGCAGCAGCAAGCCAAGGCAGTCTTGGATCAGAGCCC GCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGTGGAACCCATCCCCGGGC CACTGCCGAGCGCAGAAAAGTCGGAGGAGACCTTGCGGCTGCCGGCGAGC GTACTCACAGTTCTGCTGGGCCAGGGCAAGCCGCGGTCCGGGGGGGGGGT AGGACGTGCGCTCAGCTCGAAGGATGTCACCAAGTGGCTGATCTTGAAGG ACATTCAAAAGTGAGCCGAGTGCTGTTTTGTGTGGTTTTCGTTCGTGCCT CTAGTTGCTGCGGGCGATGTTGCTCGTTTTTTCTTTCGCGCATATTTATG CGTTTTTTTTCTTCATTTTTTTCAGTACATTATATTGATGCCCTTTTTCA GGGTAAGTTATCCTGTGACGACGGGAATCGACCGCGTCAGTATTGGGTTA GTACGGAACCGTGGAGATGTACTGGATAGAGAGATCGGAATGGCTTTTAC TGTGAAGACAACAACAACAACAACAACAATGCCGCCGCCGCCCCCTCCCC CCCCCCCCCTCCCATCTGACATCTCTTCGGTATCCCTGGAGCTGAGAGTA GTCCTGGGTTCGCAGCCACCACCGGCCCTGTATTGCAGCGGCTTTCCGTA CGTTTTTGGACCACGAAAGGGGGCCGACTGTTTGGAGTACAGACGTGCTG GCACCACCGGGGGGCCTGACGCACGTCACCCCCAATGCTGCCAGAGGGGG GAGGGGGGGGGGGGGTTGCCTCTGAAAGCGGTGTCCCGCATGATCGCGTC CCGCGTATATACTCGTACCCTATAAGCGGACTGCGCCCCGCCCGCCCCCC TGCTGCTGTATCGATGCACCTCAGGCATACCGGCACCACGGCGACGTTGA TTTCCTTGCCACGCACCGGCAGCGGCGGCAGCGGCGAGGGAGCGGCGGTG ACGGTGAATGCGGCGGCGGGTAGGCCCGAAGAGTCGGACGGTCGACAAGC GGCACCCGCGGGCAACGGCGACGACTCTGCAGAGGTACCTGCGATACATA TCATATAAAAACTAAAAAAAATAAGATTTCATGGGAGTCTCGTCTCCAAC GTGGGTTAGGTTTCATTTTTGATTATCTGCTTAAATATCTTTCAAGATTT GTCGTCGAGACAAGAGAATGGTGAAAAACGCAGGCACGCAGCAGGCAAAC AGCCCCCCCCCTGTAAGCGAACCCGCACTTGTACCCCCCCCGCGCTTGCC ATTTCCCGAACCCACAGTGTACGGATCATACACACATGAGCCCTTCGTCC TGGCTTCCGCCTCTAGTGTGATCGATGTTTGGTTTGGTCTTAACTATGGC TTGATGGCTTGGTATTTTACTGTAAGTCTTGGCGAGTCAATCGATACAGC CACACAACCCTGCCGCTGCCCTCGGCTCCGTCGCCATACGACGAGGGATT TAGCGACGAGCTTCCAACCCGACGCAGCGACGCTCCAAGCGCACCGCGGA GAACGACCCGACATCTGGGTGCCCGGACCAGTTGAAGGCGTGGACAATAT ACCGTAGGTGACACAAGATACCACGCCCCCTGGACCGAATTTTAGAGCTC CAGTACTCCGTAACGAAGACGGCGCCAGCACCAAACGACAGATTTTGGAA CAGCACTCGACTAGATCTTTCCAACGCCACCCCTTCCGGCACTGGCACCC TCTTCGTTACGGAGTAATGCAGCTCTGAAATTCGGTCCGGGGGGTGTGGT ATCTTGTGTCACCTACGGTAGAGACGGCCTCCCAGCCAGCTGGCTGCAGC CCCGTTTGCTGCCCCCCCCCCCCCCCCCCCCCCCCGACACACACACAGAC TCCTGTCGGAGCTAATTTTTTGCTTTTTTTGGTGTGCGATTTTTTTTCCG GCCAACAGGCGCTGGTGCTGCTGATCAGGGGCCCCGCGAACTGCGTGGAG GTGGCCGCCGAGGCGCTGAGGAAGCTGGGGCGGATGGAGACGGTGCGGGA AACCCTGAGCTTTGTGAAGACGACTTCGCCCCACCGCAGGCTCACTCGGG GGCGCCGCCTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTAGGC AGGCCCATCCGTGCCCCCACTACCGTCAACCCGGGACAAAGCCCGTTTTT ACGTGGTGGGATTGGGGTGGTGTCCCACATTTATATGTATGTGTTCCCGT GCTTTGTTGTTGTTTGGGTCGAGGGATAGTTTTTGCTGCTGTGGTTTCAT GTCTTGAGTGTCGTACCCAGGTGAAGTTAGCCTTTCCGTATGTGCTTACG CTCGCCCTAGGCGCAACGCACAACGCCCCCGTGCTTTTAACGTGAGTTCG TCGCGCAGTATCCCCACTCCGCTACAGGTATGTACAGGCATAGGTATAGC ACCCGCCACCGAATAGTTTGCTCCTCGAAAGGCTGGCGATGACCGCGAGT GGTTAGAGTGATTAAATCGTGAGCGAAGCGTGGTAGTCATGTTATGTGCT AGTACCTGGTGTCATATTCCGAGCGGGTTTGTCGCCCGAGAAGCTGAAAG CGTGCGGTTGCGGCTGAGGTGTTTCCTATTGACCTGGTTCCCTCCCCCCC CCCAGGCTAAACATCAGAACAACAACACCTACAACAGCAGCGGCAGCAGC AGCACGGTGGCGAAGGGTCAGAGGCACGACACACGACGAGACGGGAAAGG CAGAGGCAACGACGCCAAGAGCAGCGACGGCACGGCAGCGAGAGATCAGC AGCACGACACGATAGGAGGTGGGCCCAACAACATCAGCAGCAACGACAGC AGCAGCAGCAACAACAACAACAACGACAATGGTAGGGCTCTACCTCATCA TCCCCCACGCCAGGTTTATTCCGCCGCCGCAGCGGCTGCTTCCGCCGTAT CGTCCCCAAGAAATAGCAAAAGATCTGCCGCCAGGGAGCAAGGAGTAGCG CCGACCCAGCCTGGCAGCACCAGCAGCGGCAACAACAGCGCCGAGCACCA GCAGCACCAGCACCAGCACCAGCAGCACCAGCAGCGCAACCGCCGCGGGG GGCAGCATAGCCTTGATGGTGAGAGCGCTCGACGAGCTCCCGGGGTGCAT TGATTTCGAATGACGCGCGCCGCGCGCACGAAACCTTGAAAGATTGCCAG GTGTTTTCGATGTCGAGCTAAAAGCTACGCAGGTCTCAGGACTCCTCTCC CATTCTCGTCCCCCCCACCCCACAGCTTGATGATACAATAGGTGATATGT CCAGGAAGATTTATGACCCCCACCCCCGTACCCCACCCCCCCCCCCCCCA CGCAGACGCAAGAAGGGGCAATAGGTGAGGTGACCATGTAGCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAGGTCCGGTCGTTTTCGGAT GCCAGGTTATGCCCCCCTCCCCATCTCTTTTGTTTTGAAAACGAGACATA TATCTTGATGCCCGACATGTCTTGGAAAAGCTCACGTCTTGAGGCACTCA CTTCCTACAAAATATGTGTATCTGTCCTGACTCTCTGTTTGCAGGCGCAG CAGAGAAGTCCACGGCAAACTTTGTGAACGGGGGTAAGAGACAGCCGGCA TCGGAAACGAGGGACGGCGGCGGCGGCGGCGGCGGCGGTGGCGGCTCGAA AAAGCGGCATGCACAACAACCATGCGGCAGTAGCAGAGGCGGCGGCGGCG GCAGGGGCGGGACAGAGAGAGAACCAGCCCATCACCGGTCGGGCGGAGGG GGGAAGCCAGAGAGGGAAGCGAAAGGGGGCGGCGCGGGGGCAGGATCTGG GTCGGGATCTGGATCTGGGCCGGGGCGAGGCAAGGGGCGTGGGCATGGGA GCCGTGAGTCGAAGCCCCAGCCCCGAGCGACCAGTCGCGATTCGCCGCCG CCGCCGCCGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGGCGGC AGGAGGCCAATCGGTGCGTGTATGCATGTTCGCAGCAGCAGCAGCAGCAG TGTTTGTTTGTTTGTTTGGTTTGCACGGATTGCCAGAGAGAATAATGCCG GGAGGCTCGGAACTGTAACTGTTGTAGGCGGGCCATTTGAAGAGTAAGTA GTAGACCAACCAGGTTTGTCTGCTTGGAAACCATGAAGAAGAAACGGTTT CGAAGAAACGGTTTCGCGGCGGCTGTGTTGAGGTCTCCAGCCCCCCTGGC ACGACGGCTGTGGTTGCGACATTGTTGTTTTCTTCTTTTCGAGCACCTGC CCTTTTCCTGGAGGAATGGATATAGATATATGGATATAGATATACGCGCG CCTTTTCACCCGCGCGGCGCAGCAGGTGCCCGAAAAGGCGTCGAACGAAA ATTCGGGCTTCCGGGCATACATAGTACGCGGACGCGACGGGCGCGTCGAT TGCCTGACTGACGACTATCAACACACGGGGCATATTAATGAACGCAGCCC TTTCCCACACCACACCCGTTGTTTGCAGGGGCCGACGATGAAGAAGGCAC CACGTTCTTCGTCGATCAAGCCCCCCCCCCGCAAAGGTAGGAGAACCGGC GCCCCCCGGGGAGGTGGCGAGGGATCAAAACCGGGGGCGACGCAGCCTGC GCCCGGCGGTCGTGCGGGGGTGAAGTCGGGAAGCAGAGACGAGCATGGAC AGCAGCGAGGGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7999:2422..9085-

>mRNA_L-elsbetiae_contig7999.16971.1 ID=mRNA_L-elsbetiae_contig7999.16971.1|Name=mRNA_L-elsbetiae_contig7999.16971.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4272bp|location=Sequence derived from alignment at L-elsbetiae_contig7999:2422..9085- (Laminarionema elsbetiae ELsaHSoW15)
GAGGTGGACACGGCGGCCGTGGCGGAGTTCCCCCTCCACGTCTGCCGGCA
CCCGCTGGTGGTGGGGGCGAGGGGGGCGACGCTGAAGCGCATCAGCGCGG
AGGCCGCGGTCCGCATCGCCGTGCCGTCGGAGAGGGAGGCGGCAGCGCAG
CAGCAGCAGCAGCAGCAAGGGTGGTCGTCGTCGTCGTCGTCGTCGTCGTC
CTTGTTGGATAAGAACCTCGTCATCCAGGAGGTGGACACGGCGGCCGTGG
CGGAGTTCCCCCTCCACGTCTGCCGGCACCCGCTGGTGGTGGGGGCGAGG
GGGGCGACGCTGAAGCGCATCAGCGCGGAGGCCGCGGTCCGCATCGCCGT
GCCGTCGGAGAGGGAGGCGGCAGCGCAGCAGCAGCAGCAGCAGCAAGGGT
GGTCGTCGTCGTCGTCGTCGTCGTCGTCCTTGTTGGATAAGAACCTCGTC
ATCCAGCTGGAAGGCGAGGTGGGGGCTTTGTTCTACTCGCTGGCCATGAT
CATCGAGGCGGTATACGGCTTCCGAGTCGCCGGCGCCCATCCACCTCCTC
CGCCTCCTCCAACAGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCCCG
ACCGACGGCACGGACGTCACGGTGGTGGTGCAGGCCCCGTACTCTGCTTC
TCCTGGTGCCACTGCTGTGGTTGTTGCTGCGGGCGCTGCGTTGGGGTCTG
GTGGCGAATCGTCGGCGGCGGGGGCGGGGGCGGGGGCGGCGATTGCGCCA
ACTGAGCAGAGATCAGCCAGGCGCGGGAAAGCGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGGATGCGCAGGTCAGCGCGAGAGCCGCTGCTGCTG
CCGCCACCGCCGCCGCATTTCCGGCCGGAGGCGTGGCGGCAGCCGCGATT
CACTCCGTTACGCGAGGTGCGGTTGATGGTGGATCGCAGCAGAAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGG
GCGCTCCCCAGATCAACGCGCGGCGACCCGCTTCTTTGGCAGCATCGGCG
CAGCAGCAAGCCAAGGCAGTCTTGGATCAGAGCCCGCAGCAGCAGCAGCA
GCAGCAGCAGCAAGGGGTGGAACCCATCCCCGGGCCACTGCCGAGCGCAG
AAAAGTCGGAGGAGACCTTGCGGCTGCCGGCGAGCGTACTCACAGTTCTG
CTGGGCCAGGGCAAGCCGCGGTCCGGGGGGGGGGTAGGACGTGCGCTCAG
CTCGAAGGATGTCACCAAGTGGCTGATCTTGAAGGACATTCAAAACTGGA
AGGCGAGGTGGGGGCTTTGTTCTACTCGCTGGCCATGATCATCGAGGCGG
TATACGGCTTCCGAGTCGCCGGCGCCCATCCACCTCCTCCGCCTCCTCCA
ACAGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCCCGACCGACGGCAC
GGACGTCACGGTGGTGGTGCAGGCCCCGTACTCTGCTTCTCCTGGTGCCA
CTGCTGTGGTTGTTGCTGCGGGCGCTGCGTTGGGGTCTGGTGGCGAATCG
TCGGCGGCGGGGGCGGGGGCGGGGGCGGCGATTGCGCCAACTGAGCAGAG
ATCAGCCAGGCGCGGGAAAGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGGATGCGCAGGTCAGCGCGAGAGCCGCTGCTGCTGCCGCCACCGCC
GCCGCATTTCCGGCCGGAGGCGTGGCGGCAGCCGCGATTCACTCCGTTAC
GCGAGGTGCGGTTGATGGTGGATCGCAGCAGAAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGCGCTCCCCAG
ATCAACGCGCGGCGACCCGCTTCTTTGGCAGCATCGGCGCAGCAGCAAGC
CAAGGCAGTCTTGGATCAGAGCCCGCAGCAGCAGCAGCAGCAGCAGCAGC
AAGGGGTGGAACCCATCCCCGGGCCACTGCCGAGCGCAGAAAAGTCGGAG
GAGACCTTGCGGCTGCCGGCGAGCGTACTCACAGTTCTGCTGGGCCAGGG
CAAGCCGCGGTCCGGGGGGGGGGTAGGACGTGCGCTCAGCTCGAAGGATG
TCACCAAGTGGCTGATCTTGAAGGACATTCAAAAGCATACCGGCACCACG
GCGACGTTGATTTCCTTGCCACGCACCGGCAGCGGCGGCAGCGGCGAGGG
AGCGGCGGTGACGGTGAATGCGGCGGCGGGTAGGCCCGAAGAGTCGGACG
GTCGACAAGCGGCACCCGCGGGCAACGGCGACGACTCTGCAGAGGCATAC
CGGCACCACGGCGACGTTGATTTCCTTGCCACGCACCGGCAGCGGCGGCA
GCGGCGAGGGAGCGGCGGTGACGGTGAATGCGGCGGCGGGTAGGCCCGAA
GAGTCGGACGGTCGACAAGCGGCACCCGCGGGCAACGGCGACGACTCTGC
AGAGGCGCTGGTGCTGCTGATCAGGGGCCCCGCGAACTGCGTGGAGGTGG
CCGCCGAGGCGCTGAGGAAGCTGGGGCGGATGGAGACGGTGCGGGAAACC
CTGAGCTTTGTGAAGACGACTTCGCCCCACCGCAGGCTCACTCGGGGGCG
CCGCCTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGCTGGTGC
TGCTGATCAGGGGCCCCGCGAACTGCGTGGAGGTGGCCGCCGAGGCGCTG
AGGAAGCTGGGGCGGATGGAGACGGTGCGGGAAACCCTGAGCTTTGTGAA
GACGACTTCGCCCCACCGCAGGCTCACTCGGGGGCGCCGCCTAGAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGAGCAGCGACGGCACGGCAGCGAGA
GATCAGCAGCACGACACGATAGGAGGTGGGCCCAACAACATCAGCAGCAA
CGACAGCAGCAGCAGCAACAACAACAACAACGACAATGGTAGGGCTCTAC
CTCATCATCCCCCACGCCAGGTTTATTCCGCCGCCGCAGCGGCTGCTTCC
GCCGTATCAGCAGCGACGGCACGGCAGCGAGAGATCAGCAGCACGACACG
ATAGGAGGTGGGCCCAACAACATCAGCAGCAACGACAGCAGCAGCAGCAA
CAACAACAACAACGACAATGGTAGGGCTCTACCTCATCATCCCCCACGCC
AGGTTTATTCCGCCGCCGCAGCGGCTGCTTCCGCCGTATCACAGCCGGCA
TCGGAAACGAGGGACGGCGGCGGCGGCGGCGGCGGCGGTGGCGGCTCGAA
AAAGCGGCATGCACAACAACCATGCGGCAGTAGCAGAGGCGGCGGCGGCG
GCAGGGGCGGGACAGAGAGAGAACCAGCCCATCACCGGTCGGGCGGAGGG
GGGAAGCCAGAGAGGGAAGCGAAAGGGGGCGGCGCGGGGGCAGGATCTGG
GTCGGGATCTGGATCTGGGCCGGGGCGAGGCAAGGGGCGTGGGCATGGGA
GCCGTGAGTCGAAGCCCCAGCCCCGAGCGACCAGTCGCGATTCGCCGCCG
CCGCCGCCGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGGCGGC
AGGAGGCCAATCGACAGCCGGCATCGGAAACGAGGGACGGCGGCGGCGGC
GGCGGCGGCGGTGGCGGCTCGAAAAAGCGGCATGCACAACAACCATGCGG
CAGTAGCAGAGGCGGCGGCGGCGGCAGGGGCGGGACAGAGAGAGAACCAG
CCCATCACCGGTCGGGCGGAGGGGGGAAGCCAGAGAGGGAAGCGAAAGGG
GGCGGCGCGGGGGCAGGATCTGGGTCGGGATCTGGATCTGGGCCGGGGCG
AGGCAAGGGGCGTGGGCATGGGAGCCGTGAGTCGAAGCCCCAGCCCCGAG
CGACCAGTCGCGATTCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAACAG
CAGCAGCAGCAGCAGCAGGCGGCAGGAGGCCAATCGGCACCACGTTCTTC
GTCGATCAAGCCCCCCCCCCGCAAAGGTAGGAGAACCGGCGCCCCCCGGG
GAGGTGGCGAGGGATCAAAACCGGGGGCGACGCAGCCTGCGCCCGGCGGT
CGTGCGGGGGTGAAGTCGGGAAGCAGAGACGAGCATGGACAGCAGCGAGG
GTGAGCACCACGTTCTTCGTCGATCAAGCCCCCCCCCCGCAAAGGTAGGA
GAACCGGCGCCCCCCGGGGAGGTGGCGAGGGATCAAAACCGGGGGCGACG
CAGCCTGCGCCCGGCGGTCGTGCGGGGGTGAAGTCGGGAAGCAGAGACGA
GCATGGACAGCAGCGAGGGTGA
back to top