prot_L-elsbetiae_contig7999.16971.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7999.16971.1
Unique Nameprot_L-elsbetiae_contig7999.16971.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length712
Homology
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Match: D7FXL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL9_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 7.310e-42
Identity = 101/165 (61.21%), Postives = 118/165 (71.52%), Query Frame = 0
Query:  297 VEPIPGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLILKDIQKHTGTTATLISLPRTGS--GGSGEGAAVTVNAAAGRPEESDGR---QAAPAGNGD-DSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSPHRRLT 455
            V PIPGPLPSAE+SEE +RLPASV+ VL GQ K +SG G+        V +WLILKDIQKHTGTTAT IS+PR G+  G +G G A   NA+A +  E       +A P    D D+ E LVLL++GP NCVEVAAEALRKLGR ETVR+ L+FVKTTSPHRRLT
Sbjct:    2 VVPIPGPLPSAERSEEIVRLPASVIPVLKGQAKSKSGNGLV-------VARWLILKDIQKHTGTTATAISVPRAGADEGRAGTGKA---NASATKMTEDAAESTAEATPTAVADGDADEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKTTSPHRRLT 156          
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Match: A0A6H5L596_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L596_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 9.280e-32
Identity = 239/464 (51.51%), Postives = 264/464 (56.90%), Query Frame = 0
Query:    1 EVDTAAVAEFPLHVCRHPLVVGARGATLKRISAEAAVRIAVPSEREAXXXXXXXXXXXXXXXXXXXXLLDKNLVIQLEGEVGALFYSLAMIIEAVYGF--RVAGAH-PXXXXXXXXXXXXXXXXXXXXDGTDVTVVV--QAPYSASPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAPQINARRPASLAASXXXXXXXXXXXXXXXXXXXXXXGVEPIPGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLILKDIQKHTGTTATLISLPRTGS----GGSGEGAAVTVNAAAGRPEESDGRQAAPAGNGDDSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSPHRRLT 455
            +VDTAAVAEFPLH+ RHP++VG +GATLKRISA  AVRI VPSE+EAXXXXXXXXXXXXXXXXXX  L DKNLV+Q+ GE         M+ EA  G    V  +H P  XXXXXXXXXXXXXXXXXX     TV    Q P    PG                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         N + P     +            XXXXX      V PIPGPLPS E+SEET+RLPASV+ VL GQ K + G G+        V +WLILKDIQKHTGT AT IS+PR G+    GG+                                 E LVLL++GP NCVEVAAEALRKLGR ETVR+ L+FVK TSPHRRLT
Sbjct:   92 QVDTAAVAEFPLHLSRHPIIVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXS-LRDKNLVVQVRGEG----MRHTMVTEAQRGVPQAVGWSHAPAAXXXXXXXXXXXXXXXXXXXXXXXTVANKRQQPAKQEPGQGHSRPPPTEIGTPSPAQQGTGARGKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------NTQWPTPPRQAGEAMPEESPKQQXXXXXQGQM--VIPIPGPLPSTERSEETVRLPASVIPVLKGQAKSKPGNGLV-------VARWLILKDIQKHTGTRATAISVPRAGADGGRGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKKTSPHRRLT 500          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7999.16971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXL9_ECTSI7.310e-4261.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L596_9PHAE9.280e-3251.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 46..512
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 46..512
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 13..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7999contigL-elsbetiae_contig7999:2422..9085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7999.16971.1mRNA_L-elsbetiae_contig7999.16971.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7999 2422..9085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7999.16971.1 ID=prot_L-elsbetiae_contig7999.16971.1|Name=mRNA_L-elsbetiae_contig7999.16971.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=712bp
EVDTAAVAEFPLHVCRHPLVVGARGATLKRISAEAAVRIAVPSEREAAAQ
QQQQQQGWSSSSSSSSSLLDKNLVIQLEGEVGALFYSLAMIIEAVYGFRV
AGAHPPPPPPPTAAAATAAAAAAPTDGTDVTVVVQAPYSASPGATAVVVA
AGAALGSGGESSAAGAGAGAAIAPTEQRSARRGKAQQQQQQQQQQQDAQV
SARAAAAAATAAAFPAGGVAAAAIHSVTRGAVDGGSQQKQQQQQQQQQQQ
QQQQQQAGAPQINARRPASLAASAQQQAKAVLDQSPQQQQQQQQQGVEPI
PGPLPSAEKSEETLRLPASVLTVLLGQGKPRSGGGVGRALSSKDVTKWLI
LKDIQKHTGTTATLISLPRTGSGGSGEGAAVTVNAAAGRPEESDGRQAAP
AGNGDDSAEALVLLIRGPANCVEVAAEALRKLGRMETVRETLSFVKTTSP
HRRLTRGRRLEQQQQQQQQQQSSDGTAARDQQHDTIGGGPNNISSNDSSS
SNNNNNDNGRALPHHPPRQVYSAAAAAASAVSQPASETRDGGGGGGGGGG
SKKRHAQQPCGSSRGGGGGRGGTEREPAHHRSGGGGKPEREAKGGGAGAG
SGSGSGSGPGRGKGRGHGSRESKPQPRATSRDSPPPPPQQQQQQQQQQQQ
AAGGQSAPRSSSIKPPPRKGRRTGAPRGGGEGSKPGATQPAPGGRAGVKS
GSRDEHGQQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf