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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 3685 |
Cds size | 2397 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816881.5563061-UTR-L-elsbetiae_contig7974:1045..1120 | 1622816881.5563061-UTR-L-elsbetiae_contig7974:1045..1120 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7974 1046..1120 + |
1691683883.8977606-UTR-L-elsbetiae_contig7974:1045..1120 | 1691683883.8977606-UTR-L-elsbetiae_contig7974:1045..1120 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7974 1046..1120 + |
1622816881.5812297-UTR-L-elsbetiae_contig7974:3517..4730 | 1622816881.5812297-UTR-L-elsbetiae_contig7974:3517..4730 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7974 3518..4730 + |
1691683883.9172964-UTR-L-elsbetiae_contig7974:3517..4730 | 1691683883.9172964-UTR-L-elsbetiae_contig7974:3517..4730 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7974 3518..4730 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816881.5693407-CDS-L-elsbetiae_contig7974:1120..3517 | 1622816881.5693407-CDS-L-elsbetiae_contig7974:1120..3517 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7974 1121..3517 + |
1691683883.907354-CDS-L-elsbetiae_contig7974:1120..3517 | 1691683883.907354-CDS-L-elsbetiae_contig7974:1120..3517 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7974 1121..3517 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7974.16943.1 >prot_L-elsbetiae_contig7974.16943.1 ID=prot_L-elsbetiae_contig7974.16943.1|Name=mRNA_L-elsbetiae_contig7974.16943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=799bp
MEDSGPVARVSARGGGKGRQPSISEVVLANTGPAGAPFCAQMLVSSKSPF VVSLKDDAATDKFGEMMGINKRYRVVAGIQALGVLLQGAQGATWNPKYPP VVEKNGGPLEKDFGSLKKVLVAVHRNDPRKIQLFKSKADSHKSVVEKARG NLRGWREAKFWEKMVMEGLRHHLERGGAANVTGLHSALSGYADSVAPGGV LSTKGILALVKKCGKNAPGAKVCPAPPGAKNAHCAPASPKAKAGRSEGKT PSDDGGIQRQAEAIVGRVSLGEPVPFQTPGHVFASDNRHLEHTLRGVGRD ADLDKAVPVDLTLSDKADPLLIADAMVSFRLGMTVLTLGTTRQTYRATDD VMQATVKRTGIAKEMIAAVKEAVEEERRASRSKGNNRGAAAAPPLTPIGK EGVSAKLLMAVVKEQLKVTKAAEVARLERLEEEEDDDDDDNNDDDDDDNN DDDDNNGTVNDDDDEEDDEKEKEKEDEDDEKGAGKRKRAQPSRERGEPPQ HDKSAAAKTGTWTDEEHNAFLDAWVAHEGDLEAVGLLVPTRTVTQIKNHA QYYLRTKVNRHRQFAGAQDDDDDGIKRARSSPSESAAGGIGAEEGGAVLT VDAGGGAGAAAGAGAAAGARMVSRIGWQSKGKGKQKAAAGARCSQAEEPM DDEKQGAGAESGSGAGDGDGDVPAGVGLLRGREGEYGEAVPNVVDGHDTA SVHASDTDTDSEPGAEKDPGEADAATEVGEDFVTEMDDVVRMEDQQQRAP EPAAGSGVDWRVDPANAAGRCLGEGGGGRPEVFIETEQWAKDRTESFH* back to topmRNA from alignment at L-elsbetiae_contig7974:1046..4730+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7974.16943.1 ID=mRNA_L-elsbetiae_contig7974.16943.1|Name=mRNA_L-elsbetiae_contig7974.16943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3685bp|location=Sequence derived from alignment at L-elsbetiae_contig7974:1046..4730+ (Laminarionema elsbetiae ELsaHSoW15) CAGGGTAGCAGCGCAAGCGAGTCAGCGGGCGCCGTTGGTGTGGCCGACTC
CAGCGAGAATGACGAAGTCGAGCTCATGGAAGACTCCGGGCCTGTAGCAC
GGGTCAGCGCGCGAGGGGGGGGGAAGGGCCGCCAGCCTTCTATCTCGGAG
GTTGTGCTTGCAAACACGGGTCCCGCGGGCGCTCCTTTTTGTGCCCAAAT
GCTCGTCTCGAGCAAGAGTCCCTTCGTTGTTAGCCTCAAGGACGACGCCG
CGACCGACAAATTCGGCGAGATGATGGGCATCAACAAGCGCTACCGCGTG
GTGGCGGGTATCCAAGCACTAGGCGTCCTTCTCCAGGGTGCACAGGGGGC
CACGTGGAACCCGAAATATCCCCCCGTGGTGGAGAAGAACGGCGGGCCCC
TCGAGAAAGACTTCGGCTCTCTCAAGAAAGTCCTCGTGGCGGTACACCGC
AACGACCCCAGGAAGATACAGCTGTTCAAGTCCAAGGCTGATAGTCACAA
GAGCGTGGTGGAAAAGGCCAGGGGAAACCTACGGGGATGGCGGGAGGCCA
AGTTCTGGGAGAAGATGGTCATGGAAGGGCTCCGCCACCACCTTGAGCGC
GGCGGTGCTGCGAATGTGACCGGTCTTCATTCCGCCCTGTCAGGGTATGC
CGATTCGGTGGCCCCCGGCGGGGTGCTGTCCACCAAGGGAATTCTGGCGC
TGGTTAAGAAGTGCGGCAAGAACGCACCAGGGGCGAAGGTATGTCCTGCC
CCCCCGGGCGCCAAGAACGCACATTGTGCCCCCGCGAGCCCGAAGGCGAA
AGCGGGCAGATCCGAGGGCAAGACTCCGAGCGACGATGGCGGCATCCAGC
GTCAAGCGGAAGCGATAGTCGGCAGGGTCAGCCTGGGAGAGCCGGTGCCC
TTCCAGACACCGGGGCACGTTTTCGCCAGCGACAACAGGCACCTCGAGCA
CACCCTGCGCGGCGTCGGGCGTGACGCCGACCTCGACAAAGCGGTGCCCG
TGGACCTCACGCTCTCCGACAAGGCGGACCCCCTCCTTATCGCCGACGCC
ATGGTCTCCTTCCGCCTGGGCATGACGGTGCTGACGCTGGGCACCACGCG
CCAAACCTACCGGGCAACCGACGATGTGATGCAGGCGACCGTGAAGAGAA
CCGGCATCGCCAAGGAGATGATCGCCGCGGTAAAAGAGGCTGTGGAGGAG
GAGCGAAGGGCCTCGAGGAGCAAGGGCAATAACAGAGGAGCGGCCGCCGC
CCCGCCTCTCACGCCGATCGGCAAAGAAGGGGTATCTGCCAAGCTGCTGA
TGGCTGTGGTTAAGGAGCAGTTGAAAGTAACGAAGGCTGCCGAGGTTGCT
CGGCTCGAGCGGTTGGAGGAGGAGGAGGACGACGACGACGACGACAACAA
CGACGACGACGACGACGACAACAACGACGACGACGACAACAACGGGACTG
TCAACGACGACGACGACGAAGAGGATGACGAGAAGGAGAAGGAGAAGGAG
GACGAGGACGACGAGAAGGGGGCAGGAAAGCGCAAGCGAGCACAGCCTTC
TCGCGAGAGGGGGGAGCCGCCGCAGCACGACAAGAGCGCGGCAGCAAAGA
CAGGCACGTGGACGGACGAGGAACACAACGCGTTCCTCGACGCCTGGGTG
GCGCACGAGGGGGACTTGGAGGCCGTCGGGCTGCTGGTACCCACCCGCAC
CGTCACCCAGATCAAGAACCACGCCCAATACTACCTGAGAACCAAGGTGA
ATCGCCACCGACAGTTTGCGGGCGCGCAGGACGACGATGATGACGGGATC
AAGCGGGCGCGGTCGTCTCCTAGCGAGAGCGCGGCGGGCGGGATCGGCGC
CGAAGAAGGAGGCGCGGTGCTCACGGTTGATGCTGGGGGTGGCGCCGGGG
CTGCTGCTGGGGCCGGGGCTGCTGCTGGGGCCAGAATGGTCTCCAGAATC
GGTTGGCAGAGCAAGGGCAAGGGCAAGCAGAAAGCCGCGGCCGGTGCACG
CTGTAGCCAGGCGGAGGAACCCATGGACGACGAGAAGCAGGGGGCCGGAG
CTGAATCTGGGTCTGGAGCTGGAGATGGAGATGGAGACGTGCCCGCCGGT
GTTGGCCTACTACGGGGAAGAGAAGGCGAGTACGGCGAAGCAGTGCCCAA
CGTCGTCGACGGTCATGACACGGCAAGTGTGCATGCTTCGGACACTGACA
CTGACTCCGAGCCCGGTGCGGAGAAGGACCCCGGCGAGGCTGATGCCGCC
ACGGAAGTGGGTGAAGATTTCGTGACCGAGATGGACGATGTCGTCCGGAT
GGAGGACCAGCAGCAGCGCGCTCCCGAACCCGCCGCCGGGAGTGGTGTTG
ACTGGAGGGTGGACCCCGCCAATGCGGCCGGACGTTGTCTCGGAGAAGGA
GGTGGAGGACGCCCCGAGGTTTTCATTGAGACAGAGCAATGGGCGAAGGA
TCGAACCGAGAGCTTTCACTGACGGTGCTCGAGATTTCTGCGACGAGCGC
GCGATCGAGCAAACAAAAAAACGAGTTATTATAACCGTCCGGTGGACTAG
ACTAGGGCTTCTCGTGGACGTTAAACGCTGCGAGGCTGCAACTTCCCGCA
GTAGTAGTACTGATGCGGCCGGCCGATCCAGCCCTCGGATCATGTTGAAG
GTGAGGGGCGGCGAGGGGGGCGAATCACAAGCGAGAGATGGAGGTATACC
TAGTAGAATGAATGTTAGCTTATAAAGGGTTCGAAAGCAAGAGCATGGTG
GGCGGCGGGTGGCGAGACCCCACGTACAAAAAATGTCGGAACAGAGGGGA
CATGGGAGACGTCGTGGGCGCCAGGAAAACAGAGGATGGTGCATGAACCG
TATGGTACATAGTCTACATAGAAAGTACGTATTTATATCGGTATCGTAGG
TACTGCGTATGTATGTCGGCCATGTTGGAGAGTTGATCGCGCGAGTTGTT
GTCATTGTTGTTGTTTCTCACACTAGCTCTCCACAAACAGGAGTAGTAAC
AAATAGTCCGAAAACATCCATGGGGGCCCGGCCCGTGGTCATAAACACAG
GGGGTGGGCGCACTCGACGCCGCTGATGAAAAGTAAGTGGAGGTGGGACA
CGTTAAGAGTGGTACCGCCCGTGCCGGACGCAACGTACAGAGGTGCTGCG
ATTCAAGGCGGCTGCGAGTTGGGTCCGTGAAGGGGGAGACCACCCACGGT
CGATTTCGTCTGTGTGCGTGTTGCAAGCCAAGTTTTTTCCTGTGTTAAGT
ATGGGGCAAGTTAATCAGAGGTTTGAGTGGTGATATTTCCACCAGTTCAT
GAGGTGTGGGCCATAATTCCGCACCGAAATTGAGTCCTCCCTATCCCCGG
GGGGCAGTAGTCTACGCAGGGTTTTCATCTTTATTTTCATCTTCAGCTAA
CATATGAGATAAAGTATACCCAGTAGTCTACGCAGGGTTTTCATCTTTTC
ATCTTCAGCCAACATATGAGATGAAGTATGGAAACCGGGAAAGGGGGGTC
GGTGGGGTTAGGGTTATTTTCCTAGAAAACTTAGTTTCCGGCGTAGTCGG
CGGTCCCCCGGGCGGCAGCGTCGTGCAGCATTGCGAAGCTTTTGTGGAGG
GAGAGGGAGCCACAATGAGTAAAATATGTTCTCATTGCAGCTCTGCTTTT
TTTTTGGACGACGACCCGACCTGTTGCCATCCACC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7974:1046..4730+ >mRNA_L-elsbetiae_contig7974.16943.1 ID=mRNA_L-elsbetiae_contig7974.16943.1|Name=mRNA_L-elsbetiae_contig7974.16943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4794bp|location=Sequence derived from alignment at L-elsbetiae_contig7974:1046..4730+ (Laminarionema elsbetiae ELsaHSoW15) ATGGAAGACTCCGGGCCTGTAGCACGGGTCAGCGCGCGAGGGGGGGGGAA GGGCCGCCAGCCTTCTATCTCGGAGGTTGTGCTTGCAAACACGGGTCCCG CGGGCGCTCCTTTTTGTGCCCAAATGCTCGTCTCGAGCAAGAGTCCCTTC GTTGTTAGCCTCAAGGACGACGCCGCGACCGACAAATTCGGCGAGATGAT GGGCATCAACAAGCGCTACCGCGTGGTGGCGGGTATCCAAGCACTAGGCG TCCTTCTCCAGGGTGCACAGGGGGCCACGTGGAACCCGAAATATCCCCCC GTGGTGGAGAAGAACGGCGGGCCCCTCGAGAAAGACTTCGGCTCTCTCAA GAAAGTCCTCGTGGCGGTACACCGCAACGACCCCAGGAAGATACAGCTGT TCAAGTCCAAGGCTGATAGTCACAAGAGCGTGGTGGAAAAGGCCAGGGGA AACCTACGGGGATGGCGGGAGGCCAAGTTCTGGGAGAAGATGGTCATGGA AGGGCTCCGCCACCACCTTGAGCGCGGCGGTGCTGCGAATGTGACCGGTC TTCATTCCGCCCTGTCAGGGTATGCCGATTCGGTGGCCCCCGGCGGGGTG CTGTCCACCAAGGGAATTCTGGCGCTGGTTAAGAAGTGCGGCAAGAACGC ACCAGGGGCGAAGGTATGTCCTGCCCCCCCGGGCGCCAAGAACGCACATT GTGCCCCCGCGAGCCCGAAGGCGAAAGCGGGCAGATCCGAGGGCAAGACT CCGAGCGACGATGGCGGCATCCAGCGTCAAGCGGAAGCGATAGTCGGCAG GGTCAGCCTGGGAGAGCCGGTGCCCTTCCAGACACCGGGGCACGTTTTCG CCAGCGACAACAGGCACCTCGAGCACACCCTGCGCGGCGTCGGGCGTGAC GCCGACCTCGACAAAGCGGTGCCCGTGGACCTCACGCTCTCCGACAAGGC GGACCCCCTCCTTATCGCCGACGCCATGGTCTCCTTCCGCCTGGGCATGA CGGTGCTGACGCTGGGCACCACGCGCCAAACCTACCGGGCAACCGACGAT GTGATGCAGGCGACCGTGAAGAGAACCGGCATCGCCAAGGAGATGATCGC CGCGGTAAAAGAGGCTGTGGAGGAGGAGCGAAGGGCCTCGAGGAGCAAGG GCAATAACAGAGGAGCGGCCGCCGCCCCGCCTCTCACGCCGATCGGCAAA GAAGGGGTATCTGCCAAGCTGCTGATGGCTGTGGTTAAGGAGCAGTTGAA AGTAACGAAGGCTGCCGAGGTTGCTCGGCTCGAGCGGTTGGAGGAGGAGG AGGACGACGACGACGACGACAACAACGACGACGACGACGACGACAACAAC GACGACGACGACAACAACGGGACTGTCAACGACGACGACGACGAAGAGGA TGACGAGAAGGAGAAGGAGAAGGAGGACGAGGACGACGAGAAGGGGGCAG GAAAGCGCAAGCGAGCACAGCCTTCTCGCGAGAGGGGGGAGCCGCCGCAG CACGACAAGAGCGCGGCAGCAAAGACAGGCACGTGGACGGACGAGGAACA CAACGCGTTCCTCGACGCCTGGGTGGCGCACGAGGGGGACTTGGAGGCCG TCGGGCTGCTGGTACCCACCCGCACCGTCACCCAGATCAAGAACCACGCC CAATACTACCTGAGAACCAAGGTGAATCGCCACCGACAGTTTGCGGGCGC GCAGGACGACGATGATGACGGGATCAAGCGGGCGCGGTCGTCTCCTAGCG AGAGCGCGGCGGGCGGGATCGGCGCCGAAGAAGGAGGCGCGGTGCTCACG GTTGATGCTGGGGGTGGCGCCGGGGCTGCTGCTGGGGCCGGGGCTGCTGC TGGGGCCAGAATGGTCTCCAGAATCGGTTGGCAGAGCAAGGGCAAGGGCA AGCAGAAAGCCGCGGCCGGTGCACGCTGTAGCCAGGCGGAGGAACCCATG GACGACGAGAAGCAGGGGGCCGGAGCTGAATCTGGGTCTGGAGCTGGAGA TGGAGATGGAGACGTGCCCGCCGGTGTTGGCCTACTACGGGGAAGAGAAG GCGAGTACGGCGAAGCAGTGCCCAACGTCGTCGACGGTCATGACACGGCA AGTGTGCATGCTTCGGACACTGACACTGACTCCGAGCCCGGTGCGGAGAA GGACCCCGGCGAGGCTGATGCCGCCACGGAAGTGGGTGAAGATTTCGTGA CCGAGATGGACGATGTCGTCCGGATGGAGGACCAGCAGCAGCGCGCTCCC GAACCCGCCGCCGGGAGTGGTGTTGACTGGAGGGTGGACCCCGCCAATGC GGCCGGACGTTGTCTCGGAGAAGGAGGTGGAGGACGCCCCGAGGTTTTCA TTGAGACAGAGCAATGGGCGAAGGATCGAACCGAGAGCTTTCACTGAATG GAAGACTCCGGGCCTGTAGCACGGGTCAGCGCGCGAGGGGGGGGGAAGGG CCGCCAGCCTTCTATCTCGGAGGTTGTGCTTGCAAACACGGGTCCCGCGG GCGCTCCTTTTTGTGCCCAAATGCTCGTCTCGAGCAAGAGTCCCTTCGTT GTTAGCCTCAAGGACGACGCCGCGACCGACAAATTCGGCGAGATGATGGG CATCAACAAGCGCTACCGCGTGGTGGCGGGTATCCAAGCACTAGGCGTCC TTCTCCAGGGTGCACAGGGGGCCACGTGGAACCCGAAATATCCCCCCGTG GTGGAGAAGAACGGCGGGCCCCTCGAGAAAGACTTCGGCTCTCTCAAGAA AGTCCTCGTGGCGGTACACCGCAACGACCCCAGGAAGATACAGCTGTTCA AGTCCAAGGCTGATAGTCACAAGAGCGTGGTGGAAAAGGCCAGGGGAAAC CTACGGGGATGGCGGGAGGCCAAGTTCTGGGAGAAGATGGTCATGGAAGG GCTCCGCCACCACCTTGAGCGCGGCGGTGCTGCGAATGTGACCGGTCTTC ATTCCGCCCTGTCAGGGTATGCCGATTCGGTGGCCCCCGGCGGGGTGCTG TCCACCAAGGGAATTCTGGCGCTGGTTAAGAAGTGCGGCAAGAACGCACC AGGGGCGAAGGTATGTCCTGCCCCCCCGGGCGCCAAGAACGCACATTGTG CCCCCGCGAGCCCGAAGGCGAAAGCGGGCAGATCCGAGGGCAAGACTCCG AGCGACGATGGCGGCATCCAGCGTCAAGCGGAAGCGATAGTCGGCAGGGT CAGCCTGGGAGAGCCGGTGCCCTTCCAGACACCGGGGCACGTTTTCGCCA GCGACAACAGGCACCTCGAGCACACCCTGCGCGGCGTCGGGCGTGACGCC GACCTCGACAAAGCGGTGCCCGTGGACCTCACGCTCTCCGACAAGGCGGA CCCCCTCCTTATCGCCGACGCCATGGTCTCCTTCCGCCTGGGCATGACGG TGCTGACGCTGGGCACCACGCGCCAAACCTACCGGGCAACCGACGATGTG ATGCAGGCGACCGTGAAGAGAACCGGCATCGCCAAGGAGATGATCGCCGC GGTAAAAGAGGCTGTGGAGGAGGAGCGAAGGGCCTCGAGGAGCAAGGGCA ATAACAGAGGAGCGGCCGCCGCCCCGCCTCTCACGCCGATCGGCAAAGAA GGGGTATCTGCCAAGCTGCTGATGGCTGTGGTTAAGGAGCAGTTGAAAGT AACGAAGGCTGCCGAGGTTGCTCGGCTCGAGCGGTTGGAGGAGGAGGAGG ACGACGACGACGACGACAACAACGACGACGACGACGACGACAACAACGAC GACGACGACAACAACGGGACTGTCAACGACGACGACGACGAAGAGGATGA CGAGAAGGAGAAGGAGAAGGAGGACGAGGACGACGAGAAGGGGGCAGGAA AGCGCAAGCGAGCACAGCCTTCTCGCGAGAGGGGGGAGCCGCCGCAGCAC GACAAGAGCGCGGCAGCAAAGACAGGCACGTGGACGGACGAGGAACACAA CGCGTTCCTCGACGCCTGGGTGGCGCACGAGGGGGACTTGGAGGCCGTCG GGCTGCTGGTACCCACCCGCACCGTCACCCAGATCAAGAACCACGCCCAA TACTACCTGAGAACCAAGGTGAATCGCCACCGACAGTTTGCGGGCGCGCA GGACGACGATGATGACGGGATCAAGCGGGCGCGGTCGTCTCCTAGCGAGA GCGCGGCGGGCGGGATCGGCGCCGAAGAAGGAGGCGCGGTGCTCACGGTT GATGCTGGGGGTGGCGCCGGGGCTGCTGCTGGGGCCGGGGCTGCTGCTGG GGCCAGAATGGTCTCCAGAATCGGTTGGCAGAGCAAGGGCAAGGGCAAGC AGAAAGCCGCGGCCGGTGCACGCTGTAGCCAGGCGGAGGAACCCATGGAC GACGAGAAGCAGGGGGCCGGAGCTGAATCTGGGTCTGGAGCTGGAGATGG AGATGGAGACGTGCCCGCCGGTGTTGGCCTACTACGGGGAAGAGAAGGCG AGTACGGCGAAGCAGTGCCCAACGTCGTCGACGGTCATGACACGGCAAGT GTGCATGCTTCGGACACTGACACTGACTCCGAGCCCGGTGCGGAGAAGGA CCCCGGCGAGGCTGATGCCGCCACGGAAGTGGGTGAAGATTTCGTGACCG AGATGGACGATGTCGTCCGGATGGAGGACCAGCAGCAGCGCGCTCCCGAA CCCGCCGCCGGGAGTGGTGTTGACTGGAGGGTGGACCCCGCCAATGCGGC CGGACGTTGTCTCGGAGAAGGAGGTGGAGGACGCCCCGAGGTTTTCATTG AGACAGAGCAATGGGCGAAGGATCGAACCGAGAGCTTTCACTGA back to top
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