prot_L-elsbetiae_contig7974.16943.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7974.16943.1
Unique Nameprot_L-elsbetiae_contig7974.16943.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length799
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7974.16943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 413..433
NoneNo IPR availableGENE3D1.10.10.60coord: 512..559
e-value: 2.3E-7
score: 32.7
IPR001005SANT/Myb domainSMARTSM00717santcoord: 508..556
e-value: 5.0E-7
score: 39.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 509..554
e-value: 3.6E-7
score: 30.3
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 504..558
score: 10.314
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 508..554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7974contigL-elsbetiae_contig7974:1121..3517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7974.16943.1mRNA_L-elsbetiae_contig7974.16943.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7974 1046..4730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7974.16943.1 ID=prot_L-elsbetiae_contig7974.16943.1|Name=mRNA_L-elsbetiae_contig7974.16943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=799bp
MEDSGPVARVSARGGGKGRQPSISEVVLANTGPAGAPFCAQMLVSSKSPF
VVSLKDDAATDKFGEMMGINKRYRVVAGIQALGVLLQGAQGATWNPKYPP
VVEKNGGPLEKDFGSLKKVLVAVHRNDPRKIQLFKSKADSHKSVVEKARG
NLRGWREAKFWEKMVMEGLRHHLERGGAANVTGLHSALSGYADSVAPGGV
LSTKGILALVKKCGKNAPGAKVCPAPPGAKNAHCAPASPKAKAGRSEGKT
PSDDGGIQRQAEAIVGRVSLGEPVPFQTPGHVFASDNRHLEHTLRGVGRD
ADLDKAVPVDLTLSDKADPLLIADAMVSFRLGMTVLTLGTTRQTYRATDD
VMQATVKRTGIAKEMIAAVKEAVEEERRASRSKGNNRGAAAAPPLTPIGK
EGVSAKLLMAVVKEQLKVTKAAEVARLERLEEEEDDDDDDNNDDDDDDNN
DDDDNNGTVNDDDDEEDDEKEKEKEDEDDEKGAGKRKRAQPSRERGEPPQ
HDKSAAAKTGTWTDEEHNAFLDAWVAHEGDLEAVGLLVPTRTVTQIKNHA
QYYLRTKVNRHRQFAGAQDDDDDGIKRARSSPSESAAGGIGAEEGGAVLT
VDAGGGAGAAAGAGAAAGARMVSRIGWQSKGKGKQKAAAGARCSQAEEPM
DDEKQGAGAESGSGAGDGDGDVPAGVGLLRGREGEYGEAVPNVVDGHDTA
SVHASDTDTDSEPGAEKDPGEADAATEVGEDFVTEMDDVVRMEDQQQRAP
EPAAGSGVDWRVDPANAAGRCLGEGGGGRPEVFIETEQWAKDRTESFH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf