mRNA_L-elsbetiae_contig771.16651.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A7S6U9W3_9STRA (Photosystem I reaction center subunit II n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W3_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.510e-80 Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSY 411 MT Y K YTP FGGSTGGWLRAAE EEKYAITW A +E++FEMPT GAA+MLIGENLLY ARKEQCLALGTQLRSL+IKEYRIYRIFPGGE+Q+LHPKDGVFPEKVN GRI +G+++FSIGKNPNP+ +KFTGK +Y Sbjct: 1 MTFYLKQYTPIFGGSTGGWLRAAEVEEKYAITWNAPKEQVFEMPTGGAAVMLIGENLLYLARKEQCLALGTQLRSLRIKEYRIYRIFPGGEVQYLHPKDGVFPEKVNAGRIPIGTKDFSIGKNPNPATIKFTGKQTY 137
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: B2XT55_HETAK (Photosystem I reaction center subunit II n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT55_HETAK) HSP 1 Score: 224 bits (570), Expect = 3.030e-73 Identity = 102/139 (73.38%), Postives = 121/139 (87.05%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 MTL + ++P FGGSTGGWLRAAE EEKY ITW + +E++FEMPT GAAIML GENLLY ARKEQCLALGTQLRS KI +Y+IYR+FP GEIQ+LHPKDGVFPEKVN GR++VGSRNFSIGKNPNP +KF+GK ++++ Sbjct: 1 MTLNLQTFSPIFGGSTGGWLRAAEIEEKYVITWSSSKEQLFEMPTGGAAIMLQGENLLYLARKEQCLALGTQLRSFKINDYKIYRLFPNGEIQYLHPKDGVFPEKVNPGRLAVGSRNFSIGKNPNPVSVKFSGKGTFDS 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: PSAD_TRICV (Photosystem I reaction center subunit II n=94 Tax=Sar TaxID=2698737 RepID=PSAD_TRICV) HSP 1 Score: 218 bits (554), Expect = 8.320e-71 Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 MTL + P FGGSTGGWLRAAE EEKYAITW +K+E+IFEMPT GAAIM GENLLY ARKEQCLALGTQLR+ KI +Y+IYRIFP GE+Q+LHPKDGVFPEKVN GR SV SR FSIGKNPNP+ +KF+G ++YE+ Sbjct: 1 MTLNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYES 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: B7T226_VAULI (Photosystem I reaction center subunit II n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T226_VAULI) HSP 1 Score: 218 bits (554), Expect = 8.320e-71 Identity = 100/139 (71.94%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 M L K+Y P FGGSTGGWLRAAE EEKYAITW + +E+ FEMPT GAA+ML +NLLY ARKEQCLALGTQL+ KI +Y+IYRIFP GE+QFLHPKDGVFPEKVN GR++VGSRNFSIGKNPNP +KF+G+ +Y++ Sbjct: 1 MNLNLKSYFPKFGGSTGGWLRAAEVEEKYAITWTSSKEQTFEMPTGGAAVMLNDQNLLYLARKEQCLALGTQLKKFKINDYKIYRIFPNGEVQFLHPKDGVFPEKVNVGRLAVGSRNFSIGKNPNPISVKFSGQETYQS 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A7S0CD48_9STRA (Photosystem I reaction center subunit II n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD48_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.180e-70 Identity = 99/139 (71.22%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 MTL + P FGGSTGGWLRAAE EEKYAITW +K+E++FEMPT GAAIM GENL+YFARKEQC+ALGTQLR+ K+ +Y+IYRIFP GE+Q+LHPKDGVFPEKVN GRIS R+FSIGKNPNP+ +KF+G ++YE+ Sbjct: 1 MTLNLQTSFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQVFEMPTGGAAIMRNGENLIYFARKEQCMALGTQLRTFKLNDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRISTNRRDFSIGKNPNPASIKFSGTATYES 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: UPI001EDDB867 (photosystem I reaction center subunit II (ferredoxin-binding) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=UPI001EDDB867) HSP 1 Score: 216 bits (551), Expect = 2.380e-70 Identity = 101/139 (72.66%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 MTL + P FGGSTGGWLR+AE EEKYAITW + +E+IFEMPT GAAIM GENLLY ARKEQCLALGTQLR+ KI Y+IYRIFP GE+QFLHPKDGVFPEK N GRI+ +RNFSIGKNPNP+ +KF+G S+YE+ Sbjct: 1 MTLNLQTPFPTFGGSTGGWLRSAEVEEKYAITWNSTKEQIFEMPTGGAAIMKTGENLLYLARKEQCLALGTQLRTFKINNYKIYRIFPSGEVQFLHPKDGVFPEKTNPGRIATNNRNFSIGKNPNPASIKFSGTSTYES 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A514CPK3_9STRA (Photosystem I reaction center subunit II n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPK3_9STRA) HSP 1 Score: 216 bits (549), Expect = 4.810e-70 Identity = 98/139 (70.50%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKFTGKSSYEA 417 MTL +P FGGSTGGWLRAAE EEKY ITW +K+E++FEMPT G AIM +GENLLY ARKEQCLAL TQLR+ KI +Y+IYR+FP GE+QFLHP DGVFPEKVN GR+ V +RNFSIGKNPNP +KF+GKS+++A Sbjct: 1 MTLKIDTLSPIFGGSTGGWLRAAEIEEKYTITWTSKKEQLFEMPTGGGAIMRLGENLLYLARKEQCLALATQLRTFKITDYKIYRVFPNGEVQFLHPADGVFPEKVNSGRVGVNNRNFSIGKNPNPIKVKFSGKSTFDA 139
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A2R4QPT8_9PHAE (Photosystem I reaction center subunit II n=4 Tax=Phaeophyceae TaxID=2870 RepID=A0A2R4QPT8_9PHAE) HSP 1 Score: 214 bits (544), Expect = 2.210e-69 Identity = 96/131 (73.28%), Postives = 114/131 (87.02%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKF 393 M++Y Y P FGGSTGGWLR+AE EEKY ITW +++E++FEMPTAG A+ML+G+NLLY ARKEQCLALGTQLR LKIK+Y+IYRIFPGGEIQFLHPKDGVFPE N+GR VG R+FSIGKNPNP+ +K+ Sbjct: 1 MSIYPSKYMPIFGGSTGGWLRSAEFEEKYVITWNSEKEQLFEMPTAGTALMLLGQNLLYLARKEQCLALGTQLRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKNPNPASIKW 131
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A0S0GAH9_COSCS (Photosystem I reaction center subunit II n=44 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GAH9_COSCS) HSP 1 Score: 213 bits (541), Expect = 6.330e-69 Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKF 393 M+LY Y P FGGSTGGWLR+AE EEKY ITW + E++FEMPTAG A+ML+G+NLLY ARKEQCLALGTQLR LKIK+Y+IYRIFPGGEIQFLHPKDGVFPE N+GR VG R+FSIGKNPNP+ +K+ Sbjct: 1 MSLYPSKYMPVFGGSTGGWLRSAEFEEKYVITWNSTTEQLFEMPTAGTALMLLGQNLLYLARKEQCLALGTQLRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKNPNPASIKW 131
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Match: A0A2I4Q2A8_9PHAE (Photosystem I reaction center subunit II n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A8_9PHAE) HSP 1 Score: 213 bits (541), Expect = 6.540e-69 Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = 1 Query: 1 MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIMLIGENLLYFARKEQCLALGTQLRSLKIKEYRIYRIFPGGEIQFLHPKDGVFPEKVNKGRISVGSRNFSIGKNPNPSLLKF 393 M ++ YTP FGGSTGGWLR+AE EEKY ITW +++E+ FEMPTAGAA+ML G+NLLY ARKEQCLALGTQLR+LKIK+Y+IYRIFPGGEIQFLHPKDGVFPE N GR+ VG R+FSIGKNPNP+ +K+ Sbjct: 1 MVVFPLKYTPTFGGSTGGWLRSAECEEKYVITWTSEKEKFFEMPTAGAALMLAGQNLLYMARKEQCLALGTQLRTLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNAGRLPVGKRDFSIGKNPNPASVKW 131 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig771.16651.1 >prot_L-elsbetiae_contig771.16651.1 ID=prot_L-elsbetiae_contig771.16651.1|Name=mRNA_L-elsbetiae_contig771.16651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp MTLYNKNYTPFFGGSTGGWLRAAETEEKYAITWEAKEERIFEMPTAGAAIback to top mRNA from alignment at L-elsbetiae_contig771:23485..23904- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig771.16651.1 ID=mRNA_L-elsbetiae_contig771.16651.1|Name=mRNA_L-elsbetiae_contig771.16651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=420bp|location=Sequence derived from alignment at L-elsbetiae_contig771:23485..23904- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig771:23485..23904- >mRNA_L-elsbetiae_contig771.16651.1 ID=mRNA_L-elsbetiae_contig771.16651.1|Name=mRNA_L-elsbetiae_contig771.16651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig771:23485..23904- (Laminarionema elsbetiae ELsaHSoW15)back to top |