mRNA_L-elsbetiae_contig771.16646.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A484L7Q7_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L7Q7_9ASTE) HSP 1 Score: 147 bits (370), Expect = 1.710e-43 Identity = 81/106 (76.42%), Postives = 87/106 (82.08%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 K PTD LRP+IPDN CIL ITAAAGTELADAYS V SS KEV++P AF LHA LL QAFAHC KF TAASRRSL RVSVPVWLIILS+QLLI+ALVS+ LTN Sbjct: 24 KPPTDALRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFLTAASRRSLGRVSVPVWLIILSDQLLIIALVSYCLTN 129
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A8J5F7R0_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F7R0_ZINOF) HSP 1 Score: 145 bits (366), Expect = 9.180e-43 Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 7 PTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 P LRP+IPDN CIL +TAAAGTELADAYSS V SS KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+ALVS+ LTN Sbjct: 35 PYHALRPIIPDNACILCLTAAAGTELADAYSSDTVIASSPRKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALVSYCLTN 138
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: M1BT56_SOLTU (Unknow protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1BT56_SOLTU) HSP 1 Score: 144 bits (364), Expect = 5.670e-42 Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVAL 297 K PTD LRP+I DNTCIL ITAAAGTELADAYSS V SS KEV++P AF LH LL QAFAHCRKFPTAASRRSL RVSVPVWLIILS+QLLI+AL Sbjct: 26 KPPTDALRPIISDNTCILYITAAAGTELADAYSSDTVIASSPGKEVHDPWAFYLHTTLLLQAFAHCRKFPTAASRRSLGRVSVPVWLIILSDQLLIIAL 124
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A8J5I8X4_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5I8X4_ZINOF) HSP 1 Score: 144 bits (363), Expect = 1.080e-41 Identity = 78/102 (76.47%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 13 DPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 D LRP+IPDN CIL + AAAGTELADAYSS V SS KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+ALVS+ LTN Sbjct: 84 DALRPIIPDNACILCLPAAAGTELADAYSSDTVIASSPRKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALVSYCLTN 185
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A8J5L2E8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5L2E8_ZINOF) HSP 1 Score: 141 bits (355), Expect = 2.080e-41 Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 K PTD L P+IP+N CIL +TAAA TELADAY S+ V SSL KEV++P AF LH LL QAF HC KFPTAASR+SL RVSVPVWLIILS+QLLI+ALVS LTN Sbjct: 9 KPPTDALHPIIPNNVCILCLTAAASTELADAYFSNTVIASSLRKEVHDPWAFYLHTALLHQAFVHCGKFPTAASRKSLGRVSVPVWLIILSDQLLIIALVSHCLTN 114
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A834FX08_RHOSS (Uncharacterized protein n=3 Tax=asterids TaxID=71274 RepID=A0A834FX08_RHOSS) HSP 1 Score: 140 bits (353), Expect = 1.460e-40 Identity = 76/99 (76.77%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVAL 297 K PTD LRP+IPDN CIL +TAAAGTELADAYS NV SS KEVY+P AF LHA LL QAFAHC +F TAASRRSL RVSVPVWLIILS+QLLI+AL Sbjct: 9 KPPTDALRPIIPDNACILCLTAAAGTELADAYSPDNVIASSPGKEVYDPWAFYLHAALLRQAFAHCGRFRTAASRRSLGRVSVPVWLIILSDQLLIIAL 107
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A5D2F7P2_GOSDA (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A5D2F7P2_GOSDA) HSP 1 Score: 141 bits (356), Expect = 2.850e-40 Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVAL 297 K PTD LRP+IPDN CIL ITAAAGTELADAYS V SS KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+AL Sbjct: 7 KPPTDALRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIAL 105
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A5N6PTZ5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PTZ5_9ASTR) HSP 1 Score: 138 bits (348), Expect = 5.500e-40 Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = 1 Query: 13 DPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 D LRP+IPDN CIL ITAAAGTELADAYS V S+ KEV++P AF L A LL QAFA+C KFP AASRRSL RVSVPVWLIILS+QLLI+ALVS+Y+TN Sbjct: 40 DALRPIIPDNACILCITAAAGTELADAYSPDTVIASTPGKEVHDPWAFYLQAALLRQAFAYCGKFPIAASRRSLGRVSVPVWLIILSDQLLIIALVSYYVTN 141
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A8J5I3J7_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5I3J7_ZINOF) HSP 1 Score: 137 bits (345), Expect = 6.920e-40 Identity = 74/106 (69.81%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 K PTD LRP+I DN CIL +T AA TELADAYSS + SS KEV++P AF LHA +L QAFAH KFPT ASRRSL R SVPVWLIILS+QLLI+ALVS+ LTN Sbjct: 9 KPPTDALRPIISDNACILCLTTAASTELADAYSSDTIIASSSRKEVHDPWAFYLHAAMLRQAFAHYGKFPTTASRRSLGRASVPVWLIILSDQLLIIALVSYCLTN 114
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Match: A0A484M1T4_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484M1T4_9ASTE) HSP 1 Score: 138 bits (347), Expect = 9.930e-40 Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALVSFYLTN 318 K PTD LRP+IPDN CIL ITA AGTELADAYS V SS KEV++P AF LHA LL QAF HC KF TAAS RSL RVSVPVWLIILS+QLLI+ALVS+ TN Sbjct: 44 KPPTDALRPIIPDNACILCITADAGTELADAYSLDTVIASSPGKEVHDPWAFYLHAALLRQAFTHCGKFLTAASHRSLGRVSVPVWLIILSDQLLIIALVSYCPTN 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig771.16646.1 >prot_L-elsbetiae_contig771.16646.1 ID=prot_L-elsbetiae_contig771.16646.1|Name=mRNA_L-elsbetiae_contig771.16646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp KQPTDPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKback to top mRNA from alignment at L-elsbetiae_contig771:3845..4165+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig771.16646.1 ID=mRNA_L-elsbetiae_contig771.16646.1|Name=mRNA_L-elsbetiae_contig771.16646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=321bp|location=Sequence derived from alignment at L-elsbetiae_contig771:3845..4165+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig771:3845..4165+ >mRNA_L-elsbetiae_contig771.16646.1 ID=mRNA_L-elsbetiae_contig771.16646.1|Name=mRNA_L-elsbetiae_contig771.16646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig771:3845..4165+ (Laminarionema elsbetiae ELsaHSoW15)back to top |