mRNA_L-elsbetiae_contig7680.16613.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5YZX2_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Striaria attenuata TaxID=64933 RepID=A0A8D5YZX2_9PHAE) HSP 1 Score: 383 bits (983), Expect = 7.320e-132 Identity = 208/262 (79.39%), Postives = 232/262 (88.55%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDN----IE-------ALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTLP 762 +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYL G++F LI+VG S DLQQSMKFFAT+YIGSLV FS ITYE++++ +FQP ++ ++ IE +LN++I SW NLCDSE LTEFFRLS+ KE++++SY NNMWFV+FDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEK SSR +P Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLAGLVFCCCLIAVGLSGDLQQSMKFFATSYIGSLVFFSAITYEEYIRKVFQPIVIGEDKFSKIEVKKIYDKSLNERIDSWYNLCDSEGLTEFFRLSYNKESIENSYGINNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKTSSRAIP 283
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5Z5F5_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A8D5Z5F5_9PHAE) HSP 1 Score: 379 bits (973), Expect = 2.430e-130 Identity = 206/261 (78.93%), Postives = 227/261 (86.97%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP------KIVTDNI-----EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL YL G++ LI VG++E+LQQ MKFFATTYIGSL+LFSF+TYE+++K FQP KI I E L++++ SW N CDSE LTEFFRLSF+K+++D+SY NNMWFV+FDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEK SRTL Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLFYLAGLVLFVCLIVVGWNENLQQFMKFFATTYIGSLILFSFMTYEEYIKKNFQPIIMGEDKITNTEITKTFQELLDERVESWYNFCDSEGLTEFFRLSFHKQSIDTSYGINNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKTPSRTL 282
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5Z4C0_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=3 Tax=Punctaria TaxID=27943 RepID=A0A8D5Z4C0_9PHAE) HSP 1 Score: 367 bits (943), Expect = 8.300e-126 Identity = 202/261 (77.39%), Postives = 226/261 (86.59%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIV-------TDNI----EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKA+EN WSAKKKRLLYL GI+F F L++VG+SEDLQQ +KFFATTYIGSLVLFS +TYE+++K F+ I T+ I E L+ +I W+NLCDSE+L FFRLSF+KE++D+SYC NNMWFV+FD SCALNDPSYLLYSTYAILLII GVILLIAMVGAI+LTLQK+CPE LYRQLGRESKNAVFSIKEK SSRT Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAVENSWSAKKKRLLYLAGIVFFFCLMAVGWSEDLQQLIKFFATTYIGSLVLFSGMTYEEYIKKEFEFLIKGEDNALNTEGIKTFQELLDKRIEFWRNLCDSEDLLYFFRLSFHKESIDTSYCLNNMWFVEFDRSCALNDPSYLLYSTYAILLIIGGVILLIAMVGAISLTLQKSCPEYLYRQLGRESKNAVFSIKEKTSSRTF 282
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A3G5FPP4_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPP4_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.030e-124 Identity = 197/262 (75.19%), Postives = 224/262 (85.50%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTD----NIE-------ALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTLP 762 ++TQNPVYSGLYLVL+FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLG +F LI + Y++DLQ S+KFFATTYIGSLVLF+ I+YE++++ F I+ D N E LN++I W LC++E LTEFF LSF+KENVDSSY TNNMWFV+FDTSCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAI+LTLQKNCPESLYRQLGRESKNA+F IKEK + ++LP Sbjct: 22 TTTQNPVYSGLYLVLVFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGSFIFFCCLILISYNKDLQDSLKFFATTYIGSLVLFNLISYEEYIEKSFHSLILNDEKFVNTENRKPFSNLLNERIEGWNALCNTEGLTEFFNLSFHKENVDSSYETNNMWFVEFDTSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAISLTLQKNCPESLYRQLGRESKNAIFLIKEKRACQSLP 283
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D6BYQ9_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Eudesme virescens TaxID=309723 RepID=A0A8D6BYQ9_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.030e-124 Identity = 201/261 (77.01%), Postives = 222/261 (85.06%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDNI-----------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYL G+ FL LI +G SE+LQ+SMKFFAT +IGS VLFS ITY++++ IFQ I+ + E LN++ W+NLCDSE LTEFF SF+KE+ D+SY NN+WFV+FDTSCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKAS R L Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLLGLAFLCCLIIIGLSENLQESMKFFATIFIGSSVLFSVITYKEYITKIFQSIIMEEEKFSNREVKKIFRELLNERTDLWQNLCDSEGLTEFFHFSFHKESADNSYGINNIWFVEFDTSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASPRPL 282
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A8D5ZBT6_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Setoutiphycus delamareoides TaxID=2849225 RepID=A0A8D5ZBT6_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.200e-123 Identity = 202/261 (77.39%), Postives = 222/261 (85.06%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTD----NIEA-------LNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVLLFFLGSGI FLLGLEFI LLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL + G+ FLF L+ +G+SE+LQQS+K FATT IG+LVLFS +TYED +K FQP I+ + N E L+ +I SW +LCDSE LTEFFRLSF KEN+D+SY N+MWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVF IKEK +RTL Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIGFLLGLEFIGLLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLFFFVGLGFLFCLLCIGWSENLQQSIKSFATTCIGTLVLFSAMTYEDSIKKKFQPIILREDKFLNTEVTKRFQDLLDGRIESWHHLCDSEGLTEFFRLSFNKENMDTSYGINHMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFLIKEKIPTRTL 282
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: E6ZET2_ECTSI (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET2_ECTSI) HSP 1 Score: 361 bits (927), Expect = 3.920e-123 Identity = 199/275 (72.36%), Postives = 225/275 (81.82%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDN-------------------------IEALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRL+Y G+ FLFFLI+VG+SE+LQ +K FATTYIGSLVLF+ + YE+++K FQ + + IE++++K+ W NLCDSE LTEFFRL F+KE+VDSSY +N MWF++FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK SR L Sbjct: 22 TSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLVYAIGLTFLFFLIAVGWSEELQNLIKLFATTYIGSLVLFNIVKYEEYIKENFQSMVNNEIAEGHLNKIKDISEFNASNKKAQKTFIESVDEKVDYWFNLCDSEGLTEFFRLLFHKESVDSSYVSNKMWFIEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKISRDL 296
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A089MX86_PETFA (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MX86_PETFA) HSP 1 Score: 348 bits (893), Expect = 6.390e-118 Identity = 198/282 (70.21%), Postives = 222/282 (78.72%), Query Frame = 1 Query: 1 GFK-SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP----KIVTDNI------------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 GFK +STQNPVYSGLYLVL FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLY+ +L LF +I + Y+ DL +K FATTYIGSLV FS TYED++K FQP +I++DN+ + LN++I W +LC SE LTEFFRL F KE+V+SSY N+ WFV+FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK SR + Sbjct: 18 GFKVTSTQNPVYSGLYLVLSFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYIFSLLVLFTIILISYNSDLFNLLKSFATTYIGSLVFFSVSTYEDYIKKNFQPVVVAEIISDNLNKEKKGIEINNSNSSDTEVKKTITDLLNERINLWDDLCQSEGLTEFFRLLFNKESVNSSYSLNSTWFVEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKDSRVI 299
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A2H4ZQY9_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZQY9_9PHAE) HSP 1 Score: 345 bits (885), Expect = 1.050e-116 Identity = 191/278 (68.71%), Postives = 222/278 (79.86%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQP----KIVTDNI------------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRTL 759 +STQNPVYSGLYLVL FFLGS IAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLY+ + LF ++ + Y+ +L + +K FATTYIGSLV+FS TYED++K FQP +IV+DN+ + LN++I SW +LC+SE LTEFFRL F KE+V+SSY N+ WF++FD+SCALNDPSYLLYSTYAILLIIAG+ILLIAMVGAI+LTLQKNCPESLYRQLGRESKNAVFSIKEK SR++ Sbjct: 22 TSTQNPVYSGLYLVLTFFLGSAIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYIFSLFLLFIIVLISYNLNLSELLKSFATTYIGSLVVFSISTYEDYIKKNFQPVIVAEIVSDNLNIEKKGIEINKSSGPDVEAKKPMTDLLNERINSWHDLCNSEGLTEFFRLLFNKESVNSSYNVNSTWFIEFDSSCALNDPSYLLYSTYAILLIIAGIILLIAMVGAISLTLQKNCPESLYRQLGRESKNAVFSIKEKKGSRSV 299
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Match: A0A0U1XCQ8_SCYLO (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XCQ8_SCYLO) HSP 1 Score: 337 bits (864), Expect = 1.330e-113 Identity = 186/271 (68.63%), Postives = 213/271 (78.60%), Query Frame = 1 Query: 10 SSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYLGGILFLFFLISVGYSEDLQQSMKFFATTYIGSLVLFSFITYEDHLKTIFQPKIVTDNI----------------------EALNDKIVSWKNLCDSENLTEFFRLSFYKENVDSSYCTNNMWFVDFDTSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAITLTLQKNCPESLYRQLGRESKNAVFSIKEKASSRT 756 +STQNPVYSGLYLVL FFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKR+LY+ G+ LF L+ + Y+ +L +K FA+TYI SLVLFS TYED++K FQP I+ + + E L+ +I W LC++E LTEFFRL F EN+ SY +N WF++FD+SCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI+LTLQKNCPESLYRQLGRESKNA+FSIKEK SSR+ Sbjct: 22 TSTQNPVYSGLYLVLTFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLVLFVVMMLDVKAIENPWSAKKKRILYVFGLFLLFSLVLISYNSELLNLIKLFASTYISSLVLFSVSTYEDYIKKNFQPVIIAEAVSNNLIKDKEGIKAEIEINKAVTEILDKRINLWDELCNTEGLTEFFRLLFNNENIKLSYDSNPTWFIEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAISLTLQKNCPESLYRQLGRESKNAIFSIKEKRSSRS 292 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7680.16613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7680.16613.1 >prot_L-elsbetiae_contig7680.16613.1 ID=prot_L-elsbetiae_contig7680.16613.1|Name=mRNA_L-elsbetiae_contig7680.16613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp GFKSSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLVYAGAIAVLback to top mRNA from alignment at L-elsbetiae_contig7680:1718..2485+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7680.16613.1 ID=mRNA_L-elsbetiae_contig7680.16613.1|Name=mRNA_L-elsbetiae_contig7680.16613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:1718..2485+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7680:1718..2485+ >mRNA_L-elsbetiae_contig7680.16613.1 ID=mRNA_L-elsbetiae_contig7680.16613.1|Name=mRNA_L-elsbetiae_contig7680.16613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:1718..2485+ (Laminarionema elsbetiae ELsaHSoW15)back to top |