mRNA_L-elsbetiae_contig753.16429.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig753.16429.1
Unique NamemRNA_L-elsbetiae_contig753.16429.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.190e-35
Identity = 78/208 (37.50%), Postives = 118/208 (56.73%), Query Frame = 2
Query:  329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGAKPDTPPEVPQDLYSLPVMMARMEASLVRKPDPIIMEAH 952
            P   +  P+D++VARVR ++D++ W + K     A+ +AL  RHLL    F  +   +LE L+++G +  AA+ECPRLL  +A +WERWIY FA RR L+++ PF+P   PRL  S YE+VL H +  + + FL T+++WG  + K G   G R   G      RSGG             LY L  +  R+   + + PDP++++AH
Sbjct:  608 PVMLIAGPEDLLVARVRGVEDRILWVLQKGAMGAAIELALLNRHLLTHQRFHALATSYLEVLLAQGAYGRAAAECPRLLGEEASSWERWIYTFAARRRLASLAPFIPLESPRLSRSTYEMVLNHFLDCDREAFLSTIKKWGTQQQKFG--RGARDEGGVEG---RSGG-------------LYDLEDLSKRVTNIVAQAPDPLLLQAH 797          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.190e-33
Identity = 83/198 (41.92%), Postives = 107/198 (54.04%), Query Frame = 2
Query:  290 PAAAEATGVRGLPPSSFVVAPDDVIVARVRDIDDK-------------VSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDL---------------AASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVP-------------TTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            P  A A  +R    +  VVA  D++VARVRD+DD              V+WA+ + D   AV VAL  RH LR H ++D+VA+ LE+LM  G +++               AA+E P LL  DA AWE+WIY FARR  L A+ P VP                 RL  SVY ++LEHL+  +P LFLET+RRWGHPR
Sbjct:  642 PGVARAPPMRRARDADLVVA-RDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPR 838          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 2.580e-33
Identity = 99/240 (41.25%), Postives = 115/240 (47.92%), Query Frame = 2
Query:  254 P*NETPTTVYHTPAAAEATGVRGLPPSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGA------KPDTPPEVPQ-DLYSLPVMMARMEASLVRKPDPIIMEAH 952
            P  E  TTV++TPA AEATGVRGLPP++FV++P+D+IVARVRDIDDKV                   R     H F                                                SA +P                                  RWGHPRGKHGGQHGGRATA RIAPGERSGG        K ++PPEV Q DLYSLPV+MARMEASLV++PDP++MEAH
Sbjct:  432 PDREGATTVFYTPAEAEATGVRGLPPATFVMSPEDLIVARVRDIDDKV---------------CSPPRDAQNMHTF------------------------------------------------SACLP--------------------------------RERWGHPRGKHGGQHGGRATASRIAPGERSGGAGGIAAAGKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAH 576          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: F0XVF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF2_AURAN)

HSP 1 Score: 138 bits (348), Expect = 9.780e-33
Identity = 67/152 (44.08%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  314 VRGLPPSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSG---AVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            +RG PP  +VV+P DV++ARVRD+DD++   + + D +G   A+A+A      +RRH   D+V  HL+ L+  G+ + AA+ CP+ L   A  WE WI+ F RR  L+ + P +PT EPRL PSVY++VLE L+ T+P   L  ++RWGHP+
Sbjct:  366 MRGSPPVLYVVSPRDVVLARVRDVDDQIELCLKRGDDAGFRDALAIANAFPASVRRHRLPDLVKAHLDALLDAGQAEAAAAACPQFLGASATLWEYWIFVFDRRGALARLAPRIPTAEPRLAPSVYDMVLERLLETDPPALLAAVKRWGHPK 517          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A5D6XHY4_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY4_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.420e-31
Identity = 76/207 (36.71%), Postives = 120/207 (57.97%), Query Frame = 2
Query:  335 SFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGAKPD--TPPE------VPQDLYSLPVMMARMEASLVRK 925
            S++  P DV+V R+R++DD+V+WA+ ++ +  A+AVAL  R  LR H  +++V  +L +L++R +F  AA+E  RL VGD  A  WE+++Y FA+R  L A+ P +PT  PRLP + YE+VL+  + ++P   LE +R+W  PR +             +AP   +GG A  D  T PE      V + LY     + ++EA   R+
Sbjct:  407 SYICTPKDVVVCRLREVDDRVAWALSRKQYESALAVALADRKALRAHALEELVEYYLGELLARQQFKRAAAEIKRLFVGDDFAALWEKYVYVFAQRGQLGAIAPLLPTANPRLPRAQYEMVLKLFLDSDPGRLLELIRKWPKPRPQ-------------LAPPSGNGGSANGDAATAPEYTETASVLEPLYDAQAWINQLEAVARRR 600          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A2D4CDY7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY7_PYTIN)

HSP 1 Score: 132 bits (332), Expect = 1.210e-30
Identity = 58/143 (40.56%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  338 FVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            ++ AP DV++ R+RD+DD+V+WA+ ++ +  A+ VAL     LR+H  ++++  HL +L+ + ++  AA E  RL VG+  A  WE+++Y FA+R  L+A+  ++PTT PRLP   YE+VL+H M ++P   LE +R+W  PR
Sbjct:  453 YICAPKDVVICRLRDVDDRVAWALSRKQYEKALNVALSDTKSLRKHSMEELMEFHLSELLKKKQYKKAADEIRRLFVGEEYAALWEKYVYVFAQRGQLTAIAKYIPTTAPRLPTVQYEMVLKHFMDSDPGQLLEIIRKWPKPR 595          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A8K1CU36_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU36_PYTOL)

HSP 1 Score: 125 bits (315), Expect = 2.090e-28
Identity = 55/143 (38.46%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  338 FVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            ++  P DV++ R+RD+DD+V+WA+ ++ +  A+ VAL     LR+   Q+++  ++ +L+ +  F  AA E  RL VG+     WE+++Y FA+R HLS++  FVPT  PRLP  VYE++L+H +  +P   LE +++W  PR
Sbjct:  417 YICTPKDVVICRLRDVDDRVAWAVSRKQYDKALEVALRDPKSLRKQSMQELMEYYISELIKKKLFKKAAEEIKRLFVGEEYGGLWEKYVYVFAQRGHLSSIAKFVPTAGPRLPTPVYEMILKHFLDADPGQLLEIIQKWPKPR 559          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: K3WSM7_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSM7_GLOUD)

HSP 1 Score: 125 bits (314), Expect = 2.830e-28
Identity = 57/144 (39.58%), Postives = 91/144 (63.19%), Query Frame = 2
Query:  335 SFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            S++  P DV++ R+RD+DD+V WA+ ++ +  A++VAL     LR H   +++  ++ +LM   +F  AA E  RL VGD  A  WE+++Y FA+R  LSA+  F+PT  PRLP   YE+VL+  + ++P   LE +R+W  P+
Sbjct:  411 SYICTPKDVVICRLRDVDDRVQWALSRKQYEQALSVALRDPKSLRTHTMDELIEYYIGELMKNKQFKKAAEEIKRLFVGDEFAKLWEKYVYVFAQRGQLSAIAKFIPTANPRLPRVQYEMVLKLFLDSDPGQLLEIIRKWPKPK 554          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A397DM90_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DM90_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.160e-27
Identity = 59/144 (40.97%), Postives = 93/144 (64.58%), Query Frame = 2
Query:  329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            P  F+  P DV+V RVRD+DD+V++A+ +  +  A+AVAL     L+RH   ++V  +L +L+   ++ +AA  C RLL      WE+++Y FA++  LSA+  F+PT+ PRLP S YE+VL+H + T+P   L+ +R+W  PR
Sbjct:  181 PVLFLCTPKDVVVCRVRDVDDRVAYALSQRAYENALAVALTDVPSLKRHALDELVEYYLGELVLSQQYAMAADVCRRLL--SPHLWEKYVYVFAQKGQLSAIAKFMPTSNPRLPTSQYEMVLKHFLDTDPAQLLQIIRKWPKPR 322          
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A397AQ06_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQ06_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.240e-27
Identity = 58/144 (40.28%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760
            P  F+  P DV+V RVRD+DD+V++A+ +  +  A+A+AL     L+RH   ++V  +L +L+   ++  AA  C RLL      WE+++Y FA++  LSA+  F+PT+ PRLP S YE+VL+H + T+P   L+ +R+W  PR
Sbjct:   44 PVLFLCTPKDVVVCRVRDVDDRVAYALSQRAYENALAIALTDVPSLKRHALDELVEYYLGELVLSQQYATAADVCRRLL--SPHLWEKYVYVFAQKGQLSAIAKFMPTSNPRLPTSQYEMVLKHFLDTDPAQLLQIIRKWPKPR 185          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TUN1_9STRA1.190e-3537.50Vacuolar protein sorting-associated protein 41 n=2... [more]
A0A836CBT2_9STRA2.190e-3341.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FS06_ECTSI2.580e-3341.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0XVF2_AURAN9.780e-3344.08Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5D6XHY4_9STRA1.420e-3136.71RING-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A2D4CDY7_PYTIN1.210e-3040.56Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A8K1CU36_PYTOL2.090e-2838.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WSM7_GLOUD2.830e-2839.58RING-type domain-containing protein n=1 Tax=Globis... [more]
A0A397DM90_9STRA2.160e-2740.97Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397AQ06_9STRA3.240e-2740.28Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig753contigL-elsbetiae_contig753:29714..32992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.4
Seed ortholog evalue4.5e-23
Seed eggNOG ortholog2880.D7FS06
Preferred nameVPS41
KEGG koko:K20184
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005798,GO:0005829,GO:0005856,GO:0006403,GO:0006508,GO:0006605,GO:0006623,GO:0006624,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006903,GO:0006906,GO:0006914,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007568,GO:0008017,GO:0008055,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008333,GO:0008340,GO:0008593,GO:0009056,GO:0009058,GO:0009267,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010259,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0016237,GO:0016482,GO:0016485,GO:0017016,GO:0017137,GO:0018130,GO:0019438,GO:0019538,GO:0019748,GO:0019899,GO:0022406,GO:0022411,GO:0023051,GO:0023057,GO:0030135,GO:0030136,GO:0030897,GO:0031090,GO:0031267,GO:0031338,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0032258,GO:0032501,GO:0032502,GO:0032879,GO:0032889,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033060,GO:0033227,GO:0033263,GO:0033365,GO:0033554,GO:0034058,GO:0034613,GO:0034727,GO:0035542,GO:0042144,GO:0042440,GO:0042441,GO:0042594,GO:0042802,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043324,GO:0043473,GO:0043474,GO:0043621,GO:0043933,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044804,GO:0045055,GO:0045184,GO:0045324,GO:0045746,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0048066,GO:0048069,GO:0048193,GO:0048278,GO:0048284,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051604,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097352,GO:0097576,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0098852,GO:0099022,GO:0099023,GO:0140056,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902500,GO:1902774
EggNOG free text desc.regulation of SNARE complex assembly
EggNOG OGsKOG2066@1,KOG2066@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons5
Model size953
Cds size438
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig753.16429.1prot_L-elsbetiae_contig753.16429.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig753 31449..32992 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816837.2782662-UTR-L-elsbetiae_contig753:29713..301071622816837.2782662-UTR-L-elsbetiae_contig753:29713..30107Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 29714..30107 +
1691683851.117485-UTR-L-elsbetiae_contig753:29713..301071691683851.117485-UTR-L-elsbetiae_contig753:29713..30107Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 29714..30107 +
1622816837.2884839-UTR-L-elsbetiae_contig753:30866..309561622816837.2884839-UTR-L-elsbetiae_contig753:30866..30956Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 30867..30956 +
1691683851.1354136-UTR-L-elsbetiae_contig753:30866..309561691683851.1354136-UTR-L-elsbetiae_contig753:30866..30956Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 30867..30956 +
1622816837.3025315-UTR-L-elsbetiae_contig753:31418..314481622816837.3025315-UTR-L-elsbetiae_contig753:31418..31448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 31419..31448 +
1691683851.1461003-UTR-L-elsbetiae_contig753:31418..314481691683851.1461003-UTR-L-elsbetiae_contig753:31418..31448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig753 31419..31448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816837.314571-CDS-L-elsbetiae_contig753:31448..316781622816837.314571-CDS-L-elsbetiae_contig753:31448..31678Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 31449..31678 +
1691683851.1571753-CDS-L-elsbetiae_contig753:31448..316781691683851.1571753-CDS-L-elsbetiae_contig753:31448..31678Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 31449..31678 +
1622816837.3268719-CDS-L-elsbetiae_contig753:32163..322871622816837.3268719-CDS-L-elsbetiae_contig753:32163..32287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 32164..32287 +
1691683851.1697927-CDS-L-elsbetiae_contig753:32163..322871691683851.1697927-CDS-L-elsbetiae_contig753:32163..32287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 32164..32287 +
1622816837.3371084-CDS-L-elsbetiae_contig753:32908..329921622816837.3371084-CDS-L-elsbetiae_contig753:32908..32992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 32909..32992 +
1691683851.1868947-CDS-L-elsbetiae_contig753:32908..329921691683851.1868947-CDS-L-elsbetiae_contig753:32908..32992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig753 32909..32992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig753.16429.1

>prot_L-elsbetiae_contig753.16429.1 ID=prot_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
MSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPR
LPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAP
GERSGGGAKPDTPPEVPQDLYSLPVMMARMEASLVRKPDPIIMEAH
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mRNA from alignment at L-elsbetiae_contig753:29714..32992+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig753.16429.1 ID=mRNA_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3279bp|location=Sequence derived from alignment at L-elsbetiae_contig753:29714..32992+ (Laminarionema elsbetiae ELsaHSoW15)
TCCCATAAATACCAAGCATTGCCTCCGGCCACACAGCCATCACCACCGCT GCTTCTCTGTTGCCGCTGCAACTACTTTATTTCTGCCTGGCTTGGTTTTT TTCTCGCGCGGTAGGAGGTACATAAAGCTATGTAGGGCTGATATATACTT CTATGTATTTATCGCCTTGCAGAGAATATGTATCACGGCTGACAAATCGT TTGTGTCTTCAGTCCCTAATTAATTTCCCTTGCGCGCGCTCCCCGCCACG ACGCCGTGAAACGAAACACCGACAACAGTGTACCACACCCCTGCGGCGGC CGAGGCAACGGGGGTGAGGGGGCTGCCCCCGTCCTCCTTCGTTGTGGCCC CCGATGACGTCATCGTGGCGAGGGTCAGGGACATCGACGACAAGGTGCGG CGGCAACGTAACCGGTTTGGAAGGAGGGGGGAGGGGGAGGAGGGAGGGGG AAGGGGCATGGCTCGTCCATGTATTGCCTTGTGATTGATGTTGTTGTTCT TGTGGTTGCTCCGACGAATGTTCACGGAAGAGAGAGAGAGACGGGGAGAA AGGGGGAGAGAAGAGAGATACCGTAGGTAACATAAGATACCACACACCCC CTGGACAGAATTTTAGAGCTCCATAACTCCGTAACGAAGAAGGTGCCAGC ACCAAACGCCATATTTTCGGACAGCGCTGGACTAGATCTTTCCAACGCCA CGCATTTCGGCAATGGCAATCTTCTTGCTGGGGAAGAATCGAGCTTTGAA AATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGGGAGGGCT TTCCGCGTAACCGGCGCCCACCGGAATCATGGCGACGAAATAACAAAGCT GGAGAGGGTTATTATAAACGCTGGAGACTTTGGCCTGGCCTACGTACCTC GAGCTGTCGGCGTGCCCAACAGATGTGCGGCTGGCTGCCTACAGCGCTAT TTAGTGCGTCTATTGCCTCCAGGCGCGGCGGCAAATAGGTGTTTTGCCAC GATGTTTCCCTCCCTAGGGAACAACCAACCCTCCGTGTGTCTGAACGGCG TTGCGCGTTTGACGCGACAACCGCTTGTTTTGGGCGAAATCACACCGTCC GCGTGGTTTGTTGTCCGTTTGCCCTTGTTGTCGTCGTCTCTTTTCGGCCG AAGGTGTCGTGGGCGATAGGGAAGGAGGACTTCTCTGGGGCCGTTGCTGT CGCGCTGGAGCAACGGCACCTCCTCAGACGGCACGATTTTCAGGTCAGGA AATCGTTTGTGTGAGTGACTGCCGCGGCCTGCCAGTGGCATGGGACGGGG TGGGGGTCAGGACTGCGGAAGACGGAGAGGGCGGCTCGAGGACAGAGAGA GAGAGAGAGAAAGAGAGAGAGCTCGGATAGTTTTTGATTTGATGTTTCTG ACAAAGAAACAAGAGTAGAAAAAACGCCTTTTCGCACGCAGAATCACGGG GTTTGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCT CCCTCTCCTCTCTGCCGGCCTCTCCCTCACCCACCCCCCCCCCCCAACCC CCCCCCCCCGCCNNNNNNNNNNCCATCTCTTGCACAAGCCCCCACCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCTACACC CCCCCCCCCCCCCCCCCCCCCCGCTGTGGCACCGTCTCCCTGCGTAATTT GACAGGATATTGTGGCCAAGCACCTGGAAGACCTCATGTCCAGGGGAGAG TTCGACCTGGCCGCTTCCGAGTGCCCCCGCCTCCTCGTCGGAGACGCCAT GGCGTGGGAGCGGTGGATCTACGGGTTTGCGCGCCGGAGGCACTTGTCCG CCGTGGTACCGTTCGTTCCCACCACGGAGCCCCGCCTGCCCCCGTCGGTG TACGAGGTGGTGCTGGAGCACCTCATGCTGACCGAGCCTCAGCTTTTCTT GGAGACTCTGCGGAGGTAGGTTCGTAAACGTGTGTGTCTCGCTCGACGCC TGTGCGTAGGGTGGTGGCCAGGGCGGCGTGTGCTAGTGTGGGGGGCCTGC CCTGCCTGCCCTGCGCTCGTTTCTGTCGTTTTGCTTGAGAGGATCGTCAC AACCAGTCAGATCACGGCGGCTCGGTTACGCAGCAGAAGCCGTTCGTTCC TCTGCTCTTGGAAATGCGTGTGCTCTTTCGCGATTTGGCCCACATGTATA TGTAGACTTAAAACATACTCTCCAAGTATCTTTGAAATCCGGGCACGATT TTGATGAGACGGGGCTGAAAATGGCCGAGATCGGCTGGGCGGGGGGGGTG CCAAGACCTCGCGAGGTCTGGCCTTAGTCTGATGTGTGAGGGTGCGTACG ATCCGCTTGTTTGGGAAGGGGTGCGGTTGTCTCACACGAGAACGCTGTTC CCATCCGCTGCGCCCCGCGTCTTTCGGAACCAACCGCCCACCGAACAAAG GTGGGGGCACCCCCGAGGGAAGCACGGGGGTCAGCACGGCGGCCGGGCGA CCGCCGGGCGAATCGCCCCGGGAGAGAGATCCGGGGGGGGTGCGAAACCC GACACCCCGCCGGAGGTACCGCAGGTATGTATGTATGTATGTATGCATTG TTGTTGTTGTTTCTCACATTAGCTCTCTAGTCCAAAACATCCTTGGGGGC CAGTGGTCACAAAACAAGGCACGCTCGACGCCGCGGAAGAAAGAAAAAAA TATATATATATGGTACACATAAACGGAACCCCGGGGGGTCTTGCGTCTCG CCGACACAAAATCAAAGGTAGAGTACATACTACTCGGAAGCTAAAATAAA ATGAAATGTATGTAGCAGGAAGCCGGACGCCGGAAGCTGGGAGTTTTGTT TCGGTATGGGTTGCCAGAGAGAGAGAGAGAGAGCGGCTCACTCTATCTAC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCGTNNNNNNNNCGGGAAGTGGGGAGTTTTTTTT GGGTACGGGGTCCCGGAGGAAGAGGGGGGGGGGGCCCACCCCCATCTCCC CCCCCCCCCCCCCTCCCCCGCGCACGCTTGACCCACAAGTATGAGCGGCC CCAGCCTCCTTCACCTGCAAGTACCGTCTCCTCACTCTGCTGCTTCTTTC TCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTGCCACAGGACTT GTACAGCCTGCCTGTAATGATGGCGCGTATGGAGGCGTCGCTCGTGCGCA AGCCTGACCCCATCATCATGGAAGCTCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig753:29714..32992+

>mRNA_L-elsbetiae_contig753.16429.1 ID=mRNA_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig753:29714..32992+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCAGGGGAGAGTTCGACCTGGCCGCTTCCGAGTGCCCCCGCCTCCT
CGTCGGAGACGCCATGGCGTGGGAGCGGTGGATCTACGGGTTTGCGCGCC
GGAGGCACTTGTCCGCCGTGGTACCGTTCGTTCCCACCACGGAGCCCCGC
CTGCCCCCGTCGGTGTACGAGGTGGTGCTGGAGCACCTCATGCTGACCGA
GCCTCAGCTTTTCTTGGAGACTCTGCGGAGATGTCCAGGGGAGAGTTCGA
CCTGGCCGCTTCCGAGTGCCCCCGCCTCCTCGTCGGAGACGCCATGGCGT
GGGAGCGGTGGATCTACGGGTTTGCGCGCCGGAGGCACTTGTCCGCCGTG
GTACCGTTCGTTCCCACCACGGAGCCCCGCCTGCCCCCGTCGGTGTACGA
GGTGGTGCTGGAGCACCTCATGCTGACCGAGCCTCAGCTTTTCTTGGAGA
CTCTGCGGAGGTGGGGGCACCCCCGAGGGAAGCACGGGGGTCAGCACGGC
GGCCGGGCGACCGCCGGGCGAATCGCCCCGGGAGAGAGATCCGGGGGGGG
TGCGAAACCCGACACCCCGCCGGAGGTACCGCAGGTGGGGGCACCCCCGA
GGGAAGCACGGGGGTCAGCACGGCGGCCGGGCGACCGCCGGGCGAATCGC
CCCGGGAGAGAGATCCGGGGGGGGTGCGAAACCCGACACCCCGCCGGAGG
TACCGCAGGACTTGTACAGCCTGCCTGTAATGATGGCGCGTATGGAGGCG
TCGCTCGTGCGCAAGCCTGACCCCATCATCATGGAAGCTCACGACTTGTA
CAGCCTGCCTGTAATGATGGCGCGTATGGAGGCGTCGCTCGTGCGCAAGC
CTGACCCCATCATCATGGAAGCTCAC
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