mRNA_L-elsbetiae_contig753.16429.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.190e-35 Identity = 78/208 (37.50%), Postives = 118/208 (56.73%), Query Frame = 2 Query: 329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGAKPDTPPEVPQDLYSLPVMMARMEASLVRKPDPIIMEAH 952 P + P+D++VARVR ++D++ W + K A+ +AL RHLL F + +LE L+++G + AA+ECPRLL +A +WERWIY FA RR L+++ PF+P PRL S YE+VL H + + + FL T+++WG + K G G R G RSGG LY L + R+ + + PDP++++AH Sbjct: 608 PVMLIAGPEDLLVARVRGVEDRILWVLQKGAMGAAIELALLNRHLLTHQRFHALATSYLEVLLAQGAYGRAAAECPRLLGEEASSWERWIYTFAARRRLASLAPFIPLESPRLSRSTYEMVLNHFLDCDREAFLSTIKKWGTQQQKFG--RGARDEGGVEG---RSGG-------------LYDLEDLSKRVTNIVAQAPDPLLLQAH 797
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.190e-33 Identity = 83/198 (41.92%), Postives = 107/198 (54.04%), Query Frame = 2 Query: 290 PAAAEATGVRGLPPSSFVVAPDDVIVARVRDIDDK-------------VSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDL---------------AASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVP-------------TTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 P A A +R + VVA D++VARVRD+DD V+WA+ + D AV VAL RH LR H ++D+VA+ LE+LM G +++ AA+E P LL DA AWE+WIY FARR L A+ P VP RL SVY ++LEHL+ +P LFLET+RRWGHPR Sbjct: 642 PGVARAPPMRRARDADLVVA-RDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPR 838
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI) HSP 1 Score: 140 bits (352), Expect = 2.580e-33 Identity = 99/240 (41.25%), Postives = 115/240 (47.92%), Query Frame = 2 Query: 254 P*NETPTTVYHTPAAAEATGVRGLPPSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGA------KPDTPPEVPQ-DLYSLPVMMARMEASLVRKPDPIIMEAH 952 P E TTV++TPA AEATGVRGLPP++FV++P+D+IVARVRDIDDKV R H F SA +P RWGHPRGKHGGQHGGRATA RIAPGERSGG K ++PPEV Q DLYSLPV+MARMEASLV++PDP++MEAH Sbjct: 432 PDREGATTVFYTPAEAEATGVRGLPPATFVMSPEDLIVARVRDIDDKV---------------CSPPRDAQNMHTF------------------------------------------------SACLP--------------------------------RERWGHPRGKHGGQHGGRATASRIAPGERSGGAGGIAAAGKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAH 576
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: F0XVF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF2_AURAN) HSP 1 Score: 138 bits (348), Expect = 9.780e-33 Identity = 67/152 (44.08%), Postives = 99/152 (65.13%), Query Frame = 2 Query: 314 VRGLPPSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSG---AVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 +RG PP +VV+P DV++ARVRD+DD++ + + D +G A+A+A +RRH D+V HL+ L+ G+ + AA+ CP+ L A WE WI+ F RR L+ + P +PT EPRL PSVY++VLE L+ T+P L ++RWGHP+ Sbjct: 366 MRGSPPVLYVVSPRDVVLARVRDVDDQIELCLKRGDDAGFRDALAIANAFPASVRRHRLPDLVKAHLDALLDAGQAEAAAAACPQFLGASATLWEYWIFVFDRRGALARLAPRIPTAEPRLAPSVYDMVLERLLETDPPALLAAVKRWGHPK 517
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A5D6XHY4_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.420e-31 Identity = 76/207 (36.71%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 335 SFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRATAGRIAPGERSGGGAKPD--TPPE------VPQDLYSLPVMMARMEASLVRK 925 S++ P DV+V R+R++DD+V+WA+ ++ + A+AVAL R LR H +++V +L +L++R +F AA+E RL VGD A WE+++Y FA+R L A+ P +PT PRLP + YE+VL+ + ++P LE +R+W PR + +AP +GG A D T PE V + LY + ++EA R+ Sbjct: 407 SYICTPKDVVVCRLREVDDRVAWALSRKQYESALAVALADRKALRAHALEELVEYYLGELLARQQFKRAAAEIKRLFVGDDFAALWEKYVYVFAQRGQLGAIAPLLPTANPRLPRAQYEMVLKLFLDSDPGRLLELIRKWPKPRPQ-------------LAPPSGNGGSANGDAATAPEYTETASVLEPLYDAQAWINQLEAVARRR 600
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A2D4CDY7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY7_PYTIN) HSP 1 Score: 132 bits (332), Expect = 1.210e-30 Identity = 58/143 (40.56%), Postives = 96/143 (67.13%), Query Frame = 2 Query: 338 FVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 ++ AP DV++ R+RD+DD+V+WA+ ++ + A+ VAL LR+H ++++ HL +L+ + ++ AA E RL VG+ A WE+++Y FA+R L+A+ ++PTT PRLP YE+VL+H M ++P LE +R+W PR Sbjct: 453 YICAPKDVVICRLRDVDDRVAWALSRKQYEKALNVALSDTKSLRKHSMEELMEFHLSELLKKKQYKKAADEIRRLFVGEEYAALWEKYVYVFAQRGQLTAIAKYIPTTAPRLPTVQYEMVLKHFMDSDPGQLLEIIRKWPKPR 595
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A8K1CU36_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU36_PYTOL) HSP 1 Score: 125 bits (315), Expect = 2.090e-28 Identity = 55/143 (38.46%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 338 FVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 ++ P DV++ R+RD+DD+V+WA+ ++ + A+ VAL LR+ Q+++ ++ +L+ + F AA E RL VG+ WE+++Y FA+R HLS++ FVPT PRLP VYE++L+H + +P LE +++W PR Sbjct: 417 YICTPKDVVICRLRDVDDRVAWAVSRKQYDKALEVALRDPKSLRKQSMQELMEYYISELIKKKLFKKAAEEIKRLFVGEEYGGLWEKYVYVFAQRGHLSSIAKFVPTAGPRLPTPVYEMILKHFLDADPGQLLEIIQKWPKPR 559
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: K3WSM7_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSM7_GLOUD) HSP 1 Score: 125 bits (314), Expect = 2.830e-28 Identity = 57/144 (39.58%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 335 SFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMA--WERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 S++ P DV++ R+RD+DD+V WA+ ++ + A++VAL LR H +++ ++ +LM +F AA E RL VGD A WE+++Y FA+R LSA+ F+PT PRLP YE+VL+ + ++P LE +R+W P+ Sbjct: 411 SYICTPKDVVICRLRDVDDRVQWALSRKQYEQALSVALRDPKSLRTHTMDELIEYYIGELMKNKQFKKAAEEIKRLFVGDEFAKLWEKYVYVFAQRGQLSAIAKFIPTANPRLPRVQYEMVLKLFLDSDPGQLLEIIRKWPKPK 554
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A397DM90_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DM90_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.160e-27 Identity = 59/144 (40.97%), Postives = 93/144 (64.58%), Query Frame = 2 Query: 329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 P F+ P DV+V RVRD+DD+V++A+ + + A+AVAL L+RH ++V +L +L+ ++ +AA C RLL WE+++Y FA++ LSA+ F+PT+ PRLP S YE+VL+H + T+P L+ +R+W PR Sbjct: 181 PVLFLCTPKDVVVCRVRDVDDRVAYALSQRAYENALAVALTDVPSLKRHALDELVEYYLGELVLSQQYAMAADVCRRLL--SPHLWEKYVYVFAQKGQLSAIAKFMPTSNPRLPTSQYEMVLKHFLDTDPAQLLQIIRKWPKPR 322
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Match: A0A397AQ06_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQ06_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.240e-27 Identity = 58/144 (40.28%), Postives = 92/144 (63.89%), Query Frame = 2 Query: 329 PSSFVVAPDDVIVARVRDIDDKVSWAIGKEDFSGAVAVALEQRHLLRRHDFQDIVAKHLEDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPR 760 P F+ P DV+V RVRD+DD+V++A+ + + A+A+AL L+RH ++V +L +L+ ++ AA C RLL WE+++Y FA++ LSA+ F+PT+ PRLP S YE+VL+H + T+P L+ +R+W PR Sbjct: 44 PVLFLCTPKDVVVCRVRDVDDRVAYALSQRAYENALAIALTDVPSLKRHALDELVEYYLGELVLSQQYATAADVCRRLL--SPHLWEKYVYVFAQKGQLSAIAKFMPTSNPRLPTSQYEMVLKHFLDTDPAQLLQIIRKWPKPR 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig753.16429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig753.16429.1 >prot_L-elsbetiae_contig753.16429.1 ID=prot_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp MSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRHLSAVVPFVPTTEPRback to top mRNA from alignment at L-elsbetiae_contig753:29714..32992+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig753.16429.1 ID=mRNA_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3279bp|location=Sequence derived from alignment at L-elsbetiae_contig753:29714..32992+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig753:29714..32992+ >mRNA_L-elsbetiae_contig753.16429.1 ID=mRNA_L-elsbetiae_contig753.16429.1|Name=mRNA_L-elsbetiae_contig753.16429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig753:29714..32992+ (Laminarionema elsbetiae ELsaHSoW15)back to top |