mRNA_L-elsbetiae_contig747.16358.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI) HSP 1 Score: 206 bits (523), Expect = 3.940e-65 Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 1 Query: 142 SALQDARKTTTVYQWSNVYDTRASSDGGCDPYGCTPALTRDQNWDATSRWSCSEKLDNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 +AL DARK TTV +W+N YD R S GGCDP GC +LTRDQ+W SRWSCSEKL+++QCKITY+FEEPQDIVR+ IKFYKG+ERVRTLK++GS GFEKTITSSGTS +D+NTDET WLSME NL +WISITEV Sbjct: 2 TALVDARKRTTVNKWANAYDDRTSEYGGCDPDGCKASLTRDQSWQDESRWSCSEKLEDAQCKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEV 143
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE) HSP 1 Score: 154 bits (389), Expect = 5.820e-40 Identity = 79/141 (56.03%), Postives = 93/141 (65.96%), Query Frame = 1 Query: 145 ALQDARKTTTVYQWSNVYDTRASSDGGCDPYGCTPALTRDQNWDATSRWSCSEKLDNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 AL DARK T V +W+N YD R S GGCDP GC + TRD++W SRWSCSEKL+++QC ITY FEEPQDIVR+ I +G F+K ITSSGTS +D+NTDET WLSME NL +WISITEV Sbjct: 607 ALVDARKRTAVKKWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDESRWSCSEKLEDAQCNITYNFEEPQDIVRIKI----------------NGEFKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEV 731
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 4.830e-18 Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 1 Query: 103 IFALISAAALGTSSALQDARKTTTVYQWSNVYDTRASSDGGCDPYGCTPALTRDQNWDATSRWSCSEKLDNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITE 564 + ++ AA +GT +A D +YDTR GCDP GCT ALTRD + SRWSC+ KL C I+Y ++ +L ++ Y+G+ R RT+ V G T TSSGT+ D++ +++ G N + W+SI E Sbjct: 179 VLDVVEAAEMGTVTATAD------------LYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSCAPKL-GGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIE 319
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.950e-16 Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 172 TVYQWSNVYDTRASSDGGCDPYGCTPALTRDQNWDATSRWSCSEKLDNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITE 564 TV +++YD R GCDP GCT ALTRD + SRWSC+ +L C I+Y I L + Y+G+ RVRT+ V G T TSSGT+ D++ +++ G L ++W+SI E Sbjct: 187 TVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSCAPEL-GGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVE 316
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.760e-15 Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 205 RASSDGGCDPYGCTPALTRDQ-NWDATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXK-FDVNTDETSWLSMEGQNLKSTDWISITEV 567 +AS D GC YGC P L D D SRWSC+E + D QC+I + F PQ++ +L + F+KG ER RTLKV+ +G EK G FDV + +++E L + +WIS+ EV Sbjct: 213 QASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKING--EKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEV 335
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 5.660e-15 Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 154 DARKTTTVYQWSNVYDTR---ASSDGGCDPYGCTPALTRDQ--NWDATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSG---GFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 +A TTV + YD R ++ D GC GC P L D D SRWSC+E++ D QC+I++ F+ PQDI + + F+KG+ER RTLKV+ +G G ++ S F + + ++ME + DWIS+ EV Sbjct: 253 EAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGS----TFNSFGIQENGVHTVTMESVGIDRDDWISLLEV 396
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 3.250e-14 Identity = 53/134 (39.55%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 193 VYDTR---ASSDGGCDPYG---CTPALTRDQNW-DATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 +DTR +S D GC G CT TRD + + SRWSC+ KL D C+I + F EPQ IV + + F+KGN+R RTL V +G T S T V +E S + +E L S +WIS+ EV Sbjct: 35 AHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESY-TDSTFNTLGVTANEASTVMLESTALLSDEWISLIEV 167
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 7.210e-14 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 238 GCTPALTRDQ--NWDATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSG---GFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 GC P L D D SRWSC+E++ D QC+IT+ F+ PQDI + + F+KG+ER RTLKV+ +G G ++ S F + + ++ME + + DWIS+ EV Sbjct: 2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGS----TFNSFGIQENGVHTVAMESVGIDADDWISLLEV 114
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 8.770e-14 Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 193 VYDTR---ASSDGGCDPYG---CTPALTRDQ-NWDATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 +DTR +S D GC G CTPA TRD + +A SRWSC+ K+ C+I Y F EPQDI + + F+KG+ERVRTL+V G +T S S V+ S + +E +L +WIS+ EV Sbjct: 87 AHDTRPGSSSGDVGCGEAGGNGCTPANTRDGISNEAESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGS-TFNPLGVSATGISSVMLESVDLLENEWISLIEV 219
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 1.070e-12 Identity = 52/133 (39.10%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 187 SNVYDTRASSDGGCDPYG---CTPALTRDQNW-DATSRWSCSEKL--DNSQCKITYQFEEPQDIVRLNIKFYKGNERVRTLKVRGSGGFEKTITSSGTSGXXXKFDVNTDETSWLSMEGQNLKSTDWISITEV 567 S +D R DG C G CT A TRD + + SRWSC+ KL D C+I + F EPQ IV + + F+KGNER RTL+V +G T S + V + S + +E L S +WIS+ EV Sbjct: 101 STAHDVRPGDDG-CGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADA-TFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig747.16358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig747.16358.1 >prot_L-elsbetiae_contig747.16358.1 ID=prot_L-elsbetiae_contig747.16358.1|Name=mRNA_L-elsbetiae_contig747.16358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp LTPLLPPLVNIIQYHPSHLSHIIFHTSTNMRSFGIFALISAAALGTSSALback to top mRNA from alignment at L-elsbetiae_contig747:24464..25666+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig747.16358.1 ID=mRNA_L-elsbetiae_contig747.16358.1|Name=mRNA_L-elsbetiae_contig747.16358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1203bp|location=Sequence derived from alignment at L-elsbetiae_contig747:24464..25666+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig747:24464..25666+ >mRNA_L-elsbetiae_contig747.16358.1 ID=mRNA_L-elsbetiae_contig747.16358.1|Name=mRNA_L-elsbetiae_contig747.16358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig747:24464..25666+ (Laminarionema elsbetiae ELsaHSoW15)back to top |