mRNA_L-elsbetiae_contig747.16357.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: D8LFA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFA3_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.020e-42 Identity = 68/102 (66.67%), Postives = 89/102 (87.25%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIASFKANI 326 LPRFRL +I++++E+YDE+R+CK CKHT+ MTGV CPCSDV V CLRCAE++C CP+ KYLLSWWTED+++ F++TA+ YL KLA+GQA+ AAIASF+ANI Sbjct: 799 LPRFRLGYIDKDTEEYDERRVCKNCKHTLFMTGVACPCSDVDVSCLRCAEESCDCPVAGKYLLSWWTEDDLNRFVRTAETYLRKLADGQANAAAIASFRANI 900
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A7S4IRT4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IRT4_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.200e-21 Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 18 GLPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIASFKANIKACYNRD 347 LPR RLD +++ES DYD+KR+C CKH + V C CS V CLR + C CP ++KY++ W TEDEM+ L+T + + +L D+A S +++ A ++D Sbjct: 396 NLPRNRLDQLDEESADYDDKRLCHACKHVCFFSCVACECSQTKVSCLRHSHYMCRCPTERKYMMIWSTEDEMNTILRTVKNFAEELKLTANDDAPDKSAQSSSNAKADKD 505
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A7S2ESI0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ESI0_TRICV) HSP 1 Score: 87.8 bits (216), Expect = 1.630e-17 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 18 GLPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADE 296 LPR RLD +++ES DYD+KR+C CKH + V C CS V CLR + C CP ++KY++ W TE EM+ L+T + + L GQ+ E Sbjct: 497 NLPRNRLDKLDEESADYDDKRLCHACKHVCFFSCVACECSQSKVSCLRHSHYMCRCPTERKYMMIWSTEAEMNGTLETVRNFA-SLLLGQSKE 588
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A7R9WKL4_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKL4_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.010e-17 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 18 GLPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYL--LKLANGQADEAAIAS 311 LP+ RLD +++ES DYD+KR+C CKH + V C CS V CLR + C CP ++KY++ W +EDEM+ L+ + + LK + +A + + S Sbjct: 470 SLPKNRLDQLDEESADYDDKRLCHACKHVCFFSCVACECSQTKVSCLRHSHYMCRCPTERKYIMIWSSEDEMNTTLRKVKSFAEELKSSVDRASDNLVTS 569
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A6U3NYJ8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NYJ8_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.160e-16 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIAS 311 LP RLD ++++S DYD+KR+C CKH + V C CS V CLR + C CP ++KY++ W +E EM L+ + + KL ++ + S Sbjct: 130 LPNNRLDQLDEQSADYDDKRLCHACKHVCFFSSVACECSQSKVSCLRHSHYMCRCPTERKYIMIWSSEREMLTTLERGKRHFKKLEESESVNTDVES 226
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: K0RUL2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUL2_THAOC) HSP 1 Score: 85.1 bits (209), Expect = 1.420e-16 Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIASFKANIKA 332 LP RLD ++ ES DYD+KR+C +CKH + V C CSD V CLR + C C I +K++L W E+EM + ++ + +L + A+ ++++ + A Sbjct: 539 LPPNRLDKLDDESADYDDKRLCHSCKHICFFSAVCCECSDSKVSCLRHSHYMCRCHISRKFMLVWTPEEEMKDAIANVRKRMSELEGSNSQSQAVPTYESLVDA 642
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A7S0G863_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G863_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.830e-16 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIASFKANIK 329 LP+ RLD +++ES DYD+KR+C +CKH + V C CS V CLR + + C CP D KY++ W T E++ Q +++ L + + A +S IK Sbjct: 484 LPKNRLDQLDEESADYDDKRLCHSCKHVCFFSAVACECSQSKVSCLRHSHQLCSCPPDSKYMMIWSTAHELAETHQKVEDFCKALK--EKEFAKKSSSNVQIK 584
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: B8BTH4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTH4_THAPS) HSP 1 Score: 83.6 bits (205), Expect = 4.990e-16 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADEAAIAS 311 LP RLD ++++S DYD+KR+C +CKH + V C CS+ V CLR + C C I +KY+L W EDEM ++ ++ +L EA I+S Sbjct: 551 LPANRLDQLDEDSADYDDKRLCHSCKHICFFSAVACECSESKVSCLRHSHYMCRCSIKRKYILIWTPEDEMRKTIERVEKRGNELEYSLKPEAGISS 647
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A1E7FMP1_9STRA (JmjC-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMP1_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.890e-15 Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANGQADE 296 LP RLD ++++S DYD+KR+C CKH + V C CS V CLR + C CP +++YL+ W E+E++ + +E +L AD+ Sbjct: 512 LPPNRLDQLDEDSADYDDKRLCHACKHICFFSAVACECSRSKVSCLRHSHYMCRCPFERRYLMVWSPEEELTQTCELVKERCAELKPKDADD 603
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Match: A0A7S2XRB0_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRB0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.900e-15 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 21 LPRFRLDFIEQESEDYDEKRMCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEMSVFLQTAQEYLLKLANG 284 LP RLD +++ES DYD+KR+C CKH + V C CS V CLR + C CP ++KYL+ W + EM+ + + L G Sbjct: 493 LPHNRLDQLDEESADYDDKRLCHACKHVCFFSAVACECSQSKVSCLRHSHYMCRCPTERKYLMIWSNDSEMNKTRDEVKRFCEHLEEG 580 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig747.16357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig747.16357.1 >prot_L-elsbetiae_contig747.16357.1 ID=prot_L-elsbetiae_contig747.16357.1|Name=mRNA_L-elsbetiae_contig747.16357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=90bp MCKTCKHTVLMTGVICPCSDVSVWCLRCAEKACGCPIDKKYLLSWWTEDEback to top mRNA from alignment at L-elsbetiae_contig747:4332..5669+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig747.16357.1 ID=mRNA_L-elsbetiae_contig747.16357.1|Name=mRNA_L-elsbetiae_contig747.16357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig747:4332..5669+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig747:4332..5669+ >mRNA_L-elsbetiae_contig747.16357.1 ID=mRNA_L-elsbetiae_contig747.16357.1|Name=mRNA_L-elsbetiae_contig747.16357.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=540bp|location=Sequence derived from alignment at L-elsbetiae_contig747:4332..5669+ (Laminarionema elsbetiae ELsaHSoW15)back to top |